RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 CALCRP30988 508 aa9.96□□□□□ -0.82
CPNE3-210ENST00000621245 POLR2JP52435 117 aaKnown RBP9.96□□□□□ -0.82
CPNE3-210ENST00000621245 CRISP3P54108 245 aa9.96□□□□□ -0.82
CPNE3-210ENST00000621245 SRSF2Q01130 221 aaKnown RBP9.96□□□□□ -0.82
CPNE3-210ENST00000621245 GNA13Q14344 377 aa9.96□□□□□ -0.82
CPNE3-210ENST00000621245 NRF1Q16656 503 aa9.96□□□□□ -0.82
CPNE3-210ENST00000621245 ELOA3BQ3SY89 546 aa9.96□□□□□ -0.82
CPNE3-210ENST00000621245 PHYHD1Q5SRE7 291 aa9.96□□□□□ -0.82
CPNE3-210ENST00000621245 C6orf10Q5SRN2 563 aa9.96□□□□□ -0.82
CPNE3-210ENST00000621245 HMBOX1Q6NT76 420 aa9.96□□□□□ -0.82
CPNE3-210ENST00000621245 NIPAL3Q6P499 406 aa9.96□□□□□ -0.82
CPNE3-210ENST00000621245 CLEC2AQ6UVW9 174 aa9.96□□□□□ -0.82
CPNE3-210ENST00000621245 IL17RELQ6ZVW7 336 aa9.96□□□□□ -0.82
CPNE3-210ENST00000621245 FUNDC1Q8IVP5 155 aa9.96□□□□□ -0.82
CPNE3-210ENST00000621245 C17orf78Q8N4C9 275 aa9.96□□□□□ -0.82
CPNE3-210ENST00000621245 ARIH2OSQ8N7S6 290 aa9.96□□□□□ -0.82
CPNE3-210ENST00000621245 ELOA3Q8NG57 546 aa9.96□□□□□ -0.82
CPNE3-210ENST00000621245 C10orf105Q8TEF2 133 aa9.96□□□□□ -0.82
CPNE3-210ENST00000621245 BCL2L2Q92843 193 aaPredicted RBP9.96□□□□□ -0.82
CPNE3-210ENST00000621245 PMM1Q92871 262 aa9.96□□□□□ -0.82
CPNE3-210ENST00000621245 FBXO17Q96EF6 278 aa9.96□□□□□ -0.82
CPNE3-210ENST00000621245 ITCHQ96J02 903 aa9.96□□□□□ -0.82
CPNE3-210ENST00000621245 ADAD1Q96M93 576 aaKnown RBP9.96□□□□□ -0.82
CPNE3-210ENST00000621245 EBF4Q9BQW3 602 aa9.96□□□□□ -0.82
CPNE3-210ENST00000621245 RHNO1Q9BSD3 238 aa9.96□□□□□ -0.82
CPNE3-210ENST00000621245 SPATA9Q9BWV2 254 aa9.96□□□□□ -0.82
CPNE3-210ENST00000621245 NBEAL1Q6ZS30 2694 aa9.96□□□□□ -0.82
CPNE3-210ENST00000621245 A8MV72 311 aaPredicted RBP9.95□□□□□ -0.82
CPNE3-210ENST00000621245 A8MVM7 634 aa9.95□□□□□ -0.82
CPNE3-210ENST00000621245 TLX2O43763 284 aaPredicted RBP9.95□□□□□ -0.82
CPNE3-210ENST00000621245 ANP32DO95626 131 aa9.95□□□□□ -0.82
CPNE3-210ENST00000621245 CECR9P0C854 216 aa9.95□□□□□ -0.82
CPNE3-210ENST00000621245 UQCRBP14927 111 aa9.95□□□□□ -0.82
CPNE3-210ENST00000621245 NCF2P19878 526 aaPredicted RBP9.95□□□□□ -0.82
CPNE3-210ENST00000621245 CD33P20138 364 aa9.95□□□□□ -0.82
CPNE3-210ENST00000621245 CBLP22681 906 aa9.95□□□□□ -0.82
CPNE3-210ENST00000621245 RPS5P46782 204 aaKnown RBP9.95□□□□□ -0.82
CPNE3-210ENST00000621245 ANXA11P50995 505 aaKnown RBP9.95□□□□□ -0.82
CPNE3-210ENST00000621245 RGNQ15493 299 aa9.95□□□□□ -0.82
CPNE3-210ENST00000621245 GSTA3Q16772 222 aa9.95□□□□□ -0.82
CPNE3-210ENST00000621245 PAGE3Q5JUK9 113 aa9.95□□□□□ -0.82
CPNE3-210ENST00000621245 PRAMEF8Q5VWM4 474 aa9.95□□□□□ -0.82
CPNE3-210ENST00000621245 PRAMEF7Q5VXH5 474 aa9.95□□□□□ -0.82
CPNE3-210ENST00000621245 ZNF544Q6NX49 715 aa9.95□□□□□ -0.82
CPNE3-210ENST00000621245 ZNF440Q8IYI8 595 aa9.95□□□□□ -0.82
CPNE3-210ENST00000621245 KIRREL3Q8IZU9 778 aa9.95□□□□□ -0.82
CPNE3-210ENST00000621245 NFKBIDQ8NI38 313 aa9.95□□□□□ -0.82
CPNE3-210ENST00000621245 TAAR8Q969N4 342 aa9.95□□□□□ -0.82
CPNE3-210ENST00000621245 SLC25A36Q96CQ1 311 aa9.95□□□□□ -0.82
CPNE3-210ENST00000621245 SLC38A2Q96QD8 506 aa9.95□□□□□ -0.82
CPNE3-210ENST00000621245 TNFRSF13CQ96RJ3 184 aa9.95□□□□□ -0.82
CPNE3-210ENST00000621245 SF3B5Q9BWJ5 86 aaKnown RBP9.95□□□□□ -0.82
CPNE3-210ENST00000621245 TMBIM4Q9HC24 238 aa9.95□□□□□ -0.82
CPNE3-210ENST00000621245 A4GALTQ9NPC4 353 aa9.95□□□□□ -0.82
CPNE3-210ENST00000621245 SLCO1B3Q9NPD5 702 aa9.95□□□□□ -0.82
CPNE3-210ENST00000621245 SLC52A3Q9NQ40 469 aa9.95□□□□□ -0.82
CPNE3-210ENST00000621245 PARPBPQ9NWS1 579 aa9.95□□□□□ -0.82
CPNE3-210ENST00000621245 A0A0G2JPF8 293 aa9.94□□□□□ -0.82
CPNE3-210ENST00000621245 A0A1B0GWA3 101 aa9.94□□□□□ -0.82
CPNE3-210ENST00000621245 HNRNPCL2B2RXH8 293 aa9.94□□□□□ -0.82
CPNE3-210ENST00000621245 HNRNPCL3B7ZW38 293 aa9.94□□□□□ -0.82
CPNE3-210ENST00000621245 CLIC1O00299 241 aa9.94□□□□□ -0.82
CPNE3-210ENST00000621245 UBDO15205 165 aa9.94□□□□□ -0.82
CPNE3-210ENST00000621245 TPST1O60507 370 aa9.94□□□□□ -0.82
CPNE3-210ENST00000621245 HNRNPCL1O60812 293 aaKnown RBP9.94□□□□□ -0.82
CPNE3-210ENST00000621245 FZD7O75084 574 aa9.94□□□□□ -0.82
CPNE3-210ENST00000621245 ZNF432O94892 652 aa9.94□□□□□ -0.82
CPNE3-210ENST00000621245 HPRP00739 348 aa9.94□□□□□ -0.82
CPNE3-210ENST00000621245 IGFBP1P08833 259 aaPredicted RBP9.94□□□□□ -0.82
CPNE3-210ENST00000621245 HNRNPCL4P0DMR1 293 aa9.94□□□□□ -0.82
CPNE3-210ENST00000621245 APOBEC3AP31941 199 aaPredicted RBP9.94□□□□□ -0.82
CPNE3-210ENST00000621245 CLDN17P56750 224 aa9.94□□□□□ -0.82
CPNE3-210ENST00000621245 PRPS1P60891 318 aa9.94□□□□□ -0.82
CPNE3-210ENST00000621245 TXNL4AP83876 142 aaKnown RBP9.94□□□□□ -0.82
CPNE3-210ENST00000621245 VLDLRP98155 873 aa9.94□□□□□ -0.82
CPNE3-210ENST00000621245 LOXL1Q08397 574 aaPredicted RBP9.94□□□□□ -0.82
CPNE3-210ENST00000621245 LRRC74AQ0VAA2 488 aa9.94□□□□□ -0.82
CPNE3-210ENST00000621245 LARS2Q15031 903 aaKnown RBP9.94□□□□□ -0.82
CPNE3-210ENST00000621245 RAB35Q15286 201 aa9.94□□□□□ -0.82
CPNE3-210ENST00000621245 ZNF311Q5JNZ3 666 aa9.94□□□□□ -0.82
CPNE3-210ENST00000621245 TMEM225Q6GV28 225 aa9.94□□□□□ -0.82
CPNE3-210ENST00000621245 VHLLQ6RSH7 139 aa9.94□□□□□ -0.82
CPNE3-210ENST00000621245 EPGNQ6UW88 154 aa9.94□□□□□ -0.82
CPNE3-210ENST00000621245 MSANTD1Q6ZTZ1 278 aa9.94□□□□□ -0.82
CPNE3-210ENST00000621245 SSX8Q7RTT4 187 aa9.94□□□□□ -0.82
CPNE3-210ENST00000621245 MIER2Q8N344 545 aa9.94□□□□□ -0.82
CPNE3-210ENST00000621245 POMGNT2Q8NAT1 580 aa9.94□□□□□ -0.82
CPNE3-210ENST00000621245 FAM168AQ92567 244 aa9.94□□□□□ -0.82
CPNE3-210ENST00000621245 BOD1Q96IK1 185 aa9.94□□□□□ -0.82
CPNE3-210ENST00000621245 EAF1Q96JC9 268 aaPredicted RBP9.94□□□□□ -0.82
CPNE3-210ENST00000621245 RHOVQ96L33 236 aa9.94□□□□□ -0.82
CPNE3-210ENST00000621245 SOX7Q9BT81 388 aa9.94□□□□□ -0.82
CPNE3-210ENST00000621245 TAPBPLQ9BX59 468 aa9.94□□□□□ -0.82
CPNE3-210ENST00000621245 NOX3Q9HBY0 568 aa9.94□□□□□ -0.82
CPNE3-210ENST00000621245 CRNNQ9UBG3 495 aaPredicted RBP9.94□□□□□ -0.82
CPNE3-210ENST00000621245 USH1CQ9Y6N9 552 aa9.94□□□□□ -0.82
CPNE3-210ENST00000621245 A0A096LPI6 279 aa9.93□□□□□ -0.82
CPNE3-210ENST00000621245 TRBV5-3A0A0A0MS03 114 aa9.93□□□□□ -0.82
CPNE3-210ENST00000621245 IGHV4-61A0A0C4DH41 118 aa9.93□□□□□ -0.82
CPNE3-210ENST00000621245 VWC2LB2RUY7 222 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms