RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 RAC3P60763 192 aa6.9□□□□□ -1.31
CLK1-215ENST00000621181 POU6F2P78424 691 aaPredicted RBP6.9□□□□□ -1.31
CLK1-215ENST00000621181 SPOCK1Q08629 439 aa6.9□□□□□ -1.31
CLK1-215ENST00000621181 SELENBP1Q13228 472 aa6.9□□□□□ -1.31
CLK1-215ENST00000621181 ATP6AP1LQ52LC2 224 aa6.9□□□□□ -1.31
CLK1-215ENST00000621181 C11orf71Q6IPW1 123 aa6.9□□□□□ -1.31
CLK1-215ENST00000621181 FAM166AQ6J272 317 aa6.9□□□□□ -1.31
CLK1-215ENST00000621181 KLHL17Q6TDP4 642 aa6.9□□□□□ -1.31
CLK1-215ENST00000621181 CBLN3Q6UW01 205 aa6.9□□□□□ -1.31
CLK1-215ENST00000621181 IL17RELQ6ZVW7 336 aa6.9□□□□□ -1.31
CLK1-215ENST00000621181 ZNF100Q8IYN0 542 aa6.9□□□□□ -1.31
CLK1-215ENST00000621181 UBE2J2Q8N2K1 259 aa6.9□□□□□ -1.31
CLK1-215ENST00000621181 ZNF786Q8N393 782 aa6.9□□□□□ -1.31
CLK1-215ENST00000621181 DHRSXQ8N5I4 330 aa6.9□□□□□ -1.31
CLK1-215ENST00000621181 OR8J3Q8NGG0 315 aa6.9□□□□□ -1.31
CLK1-215ENST00000621181 OR52N5Q8NH56 324 aa6.9□□□□□ -1.31
CLK1-215ENST00000621181 ZNF775Q96BV0 537 aaPredicted RBP6.9□□□□□ -1.31
CLK1-215ENST00000621181 PPCDCQ96CD2 204 aa6.9□□□□□ -1.31
CLK1-215ENST00000621181 ISOC1Q96CN7 298 aa6.9□□□□□ -1.31
CLK1-215ENST00000621181 DHRS9Q9BPW9 319 aa6.9□□□□□ -1.31
CLK1-215ENST00000621181 GORASP2Q9H8Y8 452 aa6.9□□□□□ -1.31
CLK1-215ENST00000621181 SH3BP4Q9P0V3 963 aa6.9□□□□□ -1.31
CLK1-215ENST00000621181 KCNS2Q9ULS6 477 aa6.9□□□□□ -1.31
CLK1-215ENST00000621181 MGAT4BQ9UQ53 548 aa6.9□□□□□ -1.31
CLK1-215ENST00000621181 CARD8Q9Y2G2 431 aa6.9□□□□□ -1.31
CLK1-215ENST00000621181 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 CIB4A0PJX0 185 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 CCDC160A6NGH7 325 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 E7EQL1 145 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 H7C417 338 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 GTPBP1O00178 669 aaKnown RBP6.89□□□□□ -1.31
CLK1-215ENST00000621181 RGS14O43566 566 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 EFNA2O43921 213 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 SNAP29O95721 258 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 CLIC3O95833 236 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 ALPLP05186 524 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 CSF3P09919 207 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 PRKCAP17252 672 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 COX5AP20674 150 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 HNF1AP20823 631 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 IGFBP5P24593 272 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 PTAFRP25105 342 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 POLR2IP36954 125 aaKnown RBP6.89□□□□□ -1.31
CLK1-215ENST00000621181 RNF144AP50876 292 aaPredicted RBP6.89□□□□□ -1.31
CLK1-215ENST00000621181 GZMMP51124 257 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 ZNF83P51522 516 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 P2RX1P51575 399 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 CCR4P51679 360 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 SUMO3P55854 103 aaPredicted RBP6.89□□□□□ -1.31
CLK1-215ENST00000621181 CHRNEQ04844 493 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 PMS2P3Q13401 168 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 RFTN2Q52LD8 501 aaPredicted RBP6.89□□□□□ -1.31
CLK1-215ENST00000621181 LIPNQ5VXI9 398 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 GLYATQ6IB77 296 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 C3orf33Q6P1S2 294 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 ZCCHC12Q6PEW1 402 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 TTC33Q6PID6 262 aaPredicted RBP6.89□□□□□ -1.31
CLK1-215ENST00000621181 TRIM46Q7Z4K8 759 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 TMCO5AQ8N6Q1 288 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 ZNF614Q8N883 585 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 FNDC5Q8NAU1 212 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 ZNF420Q8TAQ5 688 aaPredicted RBP6.89□□□□□ -1.31
CLK1-215ENST00000621181 FAM81AQ8TBF8 368 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 C10orf105Q8TEF2 133 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 GTF2H4Q92759 462 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 PROX1Q92786 737 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 C12orf43Q96C57 262 aaKnown RBP6.89□□□□□ -1.31
CLK1-215ENST00000621181 GIMAP5Q96F15 307 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 C16orf58Q96GQ5 468 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 MRGPRX4Q96LA9 322 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 OR5B2Q96R09 309 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 ZNF300Q96RE9 604 aaPredicted RBP6.89□□□□□ -1.31
CLK1-215ENST00000621181 INPP5KQ9BT40 448 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 BTBD2Q9BX70 525 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 IKZF5Q9H5V7 419 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 ZCCHC3Q9NUD5 404 aaKnown RBP6.89□□□□□ -1.31
CLK1-215ENST00000621181 GIN1Q9NXP7 522 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 NTMQ9P121 344 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 MAGEL2Q9UJ55 1249 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 ICAM5Q9UMF0 924 aa6.89□□□□□ -1.31
CLK1-215ENST00000621181 RNF103-CHMP3A0A140T963 221 aa6.88□□□□□ -1.31
CLK1-215ENST00000621181 LOC100289279A0A1B0GTE1 492 aa6.88□□□□□ -1.31
CLK1-215ENST00000621181 A0A1W2PR80 420 aa6.88□□□□□ -1.31
CLK1-215ENST00000621181 M0R1B8 84 aa6.88□□□□□ -1.31
CLK1-215ENST00000621181 CYTIPO60759 359 aa6.88□□□□□ -1.31
CLK1-215ENST00000621181 LY6HO94772 140 aa6.88□□□□□ -1.31
CLK1-215ENST00000621181 IGHV3-9P01782 118 aa6.88□□□□□ -1.31
CLK1-215ENST00000621181 EDNRAP25101 427 aa6.88□□□□□ -1.31
CLK1-215ENST00000621181 CD40P25942 277 aa6.88□□□□□ -1.31
CLK1-215ENST00000621181 GZMKP49863 264 aa6.88□□□□□ -1.31
CLK1-215ENST00000621181 EFNA4P52798 201 aa6.88□□□□□ -1.31
CLK1-215ENST00000621181 DCTN2Q13561 401 aaKnown RBP6.88□□□□□ -1.31
CLK1-215ENST00000621181 DAG1Q14118 895 aa6.88□□□□□ -1.31
CLK1-215ENST00000621181 GGTLC2Q14390 218 aa6.88□□□□□ -1.31
CLK1-215ENST00000621181 LASP1Q14847 261 aaKnown RBP6.88□□□□□ -1.31
CLK1-215ENST00000621181 TOMM34Q15785 309 aaPredicted RBP6.88□□□□□ -1.31
CLK1-215ENST00000621181 NDUFAF6Q330K2 333 aa6.88□□□□□ -1.31
CLK1-215ENST00000621181 ZNF385BQ569K4 471 aa6.88□□□□□ -1.31
CLK1-215ENST00000621181 FAM120AOSQ5T036 256 aa6.88□□□□□ -1.31
CLK1-215ENST00000621181 LAIR2Q6ISS4 152 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms