RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 CRNNQ9UBG3 495 aaPredicted RBP15.71■□□□□ 0.11
PCDHGC3-205ENST00000617641 GRHPRQ9UBQ7 328 aa15.71■□□□□ 0.11
PCDHGC3-205ENST00000617641 ZNF346Q9UL40 294 aaKnown RBP15.71■□□□□ 0.11
PCDHGC3-205ENST00000617641 PCDHGB2Q9Y5G2 931 aa15.71■□□□□ 0.11
PCDHGC3-205ENST00000617641 B3GALT1Q9Y5Z6 326 aa15.71■□□□□ 0.11
PCDHGC3-205ENST00000617641 LOC102723996A0A087X1L8 192 aa15.71■□□□□ 0.1
PCDHGC3-205ENST00000617641 A8MVM7 634 aa15.71■□□□□ 0.1
PCDHGC3-205ENST00000617641 C11orf98E9PRG8 122 aa15.71■□□□□ 0.1
PCDHGC3-205ENST00000617641 TAF4O00268 1085 aa15.71■□□□□ 0.1
PCDHGC3-205ENST00000617641 DVL2O14641 736 aa15.71■□□□□ 0.1
PCDHGC3-205ENST00000617641 FLRT2O43155 660 aa15.71■□□□□ 0.1
PCDHGC3-205ENST00000617641 CD40LGP29965 261 aa15.71■□□□□ 0.1
PCDHGC3-205ENST00000617641 E2F1Q01094 437 aa15.71■□□□□ 0.1
PCDHGC3-205ENST00000617641 MESTQ5EB52 335 aa15.71■□□□□ 0.1
PCDHGC3-205ENST00000617641 SLC35D3Q5M8T2 416 aa15.71■□□□□ 0.1
PCDHGC3-205ENST00000617641 C1orf140Q5VVS0 124 aa15.71■□□□□ 0.1
PCDHGC3-205ENST00000617641 RPTNQ6XPR3 784 aa15.71■□□□□ 0.1
PCDHGC3-205ENST00000617641 CENPSQ8N2Z9 138 aa15.71■□□□□ 0.1
PCDHGC3-205ENST00000617641 PARP16Q8N5Y8 322 aa15.71■□□□□ 0.1
PCDHGC3-205ENST00000617641 TTC9Q92623 222 aa15.71■□□□□ 0.1
PCDHGC3-205ENST00000617641 TAS2R5Q9NYW4 299 aa15.71■□□□□ 0.1
PCDHGC3-205ENST00000617641 R4GN57 208 aa15.71■□□□□ 0.1
PCDHGC3-205ENST00000617641 TXNDC12O95881 172 aa15.7■□□□□ 0.1
PCDHGC3-205ENST00000617641 PRKCAP17252 672 aa15.7■□□□□ 0.1
PCDHGC3-205ENST00000617641 KRR1Q13601 381 aaKnown RBP15.7■□□□□ 0.1
PCDHGC3-205ENST00000617641 TP53I3Q53FA7 332 aa15.7■□□□□ 0.1
PCDHGC3-205ENST00000617641 FAM69AQ5T7M9 428 aa15.7■□□□□ 0.1
PCDHGC3-205ENST00000617641 TUBA3EQ6PEY2 450 aa15.7■□□□□ 0.1
PCDHGC3-205ENST00000617641 ARL9Q6T311 187 aa15.7■□□□□ 0.1
PCDHGC3-205ENST00000617641 ARSKQ6UWY0 536 aa15.7■□□□□ 0.1
PCDHGC3-205ENST00000617641 TMEM91Q6ZNR0 172 aa15.7■□□□□ 0.1
PCDHGC3-205ENST00000617641 DCDC5Q6ZRR9 648 aa15.7■□□□□ 0.1
PCDHGC3-205ENST00000617641 VASH1Q7L8A9 365 aaPredicted RBP15.7■□□□□ 0.1
PCDHGC3-205ENST00000617641 MAMDC2Q7Z304 686 aaPredicted RBP15.7■□□□□ 0.1
PCDHGC3-205ENST00000617641 GPALPP1Q8IXQ4 340 aa15.7■□□□□ 0.1
PCDHGC3-205ENST00000617641 OR5J2Q8NH18 312 aa15.7■□□□□ 0.1
PCDHGC3-205ENST00000617641 ELP5Q8TE02 316 aa15.7■□□□□ 0.1
PCDHGC3-205ENST00000617641 RNF138Q8WVD3 245 aa15.7■□□□□ 0.1
PCDHGC3-205ENST00000617641 MED18Q9BUE0 208 aa15.7■□□□□ 0.1
PCDHGC3-205ENST00000617641 GPR179Q6PRD1 2367 aa15.7■□□□□ 0.1
PCDHGC3-205ENST00000617641 CPAMD8Q8IZJ3 1885 aa15.7■□□□□ 0.1
PCDHGC3-205ENST00000617641 IGHV1-45A0A0A0MS14 117 aa15.69■□□□□ 0.1
PCDHGC3-205ENST00000617641 RGS5O15539 181 aa15.69■□□□□ 0.1
PCDHGC3-205ENST00000617641 OR2T7P0C7T2 308 aa15.69■□□□□ 0.1
PCDHGC3-205ENST00000617641 CCKBRP32239 447 aa15.69■□□□□ 0.1
PCDHGC3-205ENST00000617641 TMED10P49755 219 aaKnown RBP15.69■□□□□ 0.1
PCDHGC3-205ENST00000617641 CAV3P56539 151 aa15.69■□□□□ 0.1
PCDHGC3-205ENST00000617641 RUNX1T1Q06455 604 aa15.69■□□□□ 0.1
PCDHGC3-205ENST00000617641 GPR50Q13585 617 aa15.69■□□□□ 0.1
PCDHGC3-205ENST00000617641 LINC01590Q5TEZ4 76 aa15.69■□□□□ 0.1
PCDHGC3-205ENST00000617641 ZNF517Q6ZMY9 492 aaPredicted RBP15.69■□□□□ 0.1
PCDHGC3-205ENST00000617641 EXD3Q8N9H8 876 aa15.69■□□□□ 0.1
PCDHGC3-205ENST00000617641 OR2T27Q8NH04 317 aa15.69■□□□□ 0.1
PCDHGC3-205ENST00000617641 SLC22A8Q8TCC7 542 aa15.69■□□□□ 0.1
PCDHGC3-205ENST00000617641 CHPT1Q8WUD6 406 aa15.69■□□□□ 0.1
PCDHGC3-205ENST00000617641 TMEM234Q8WY98 164 aa15.69■□□□□ 0.1
PCDHGC3-205ENST00000617641 RASL10BQ96S79 203 aa15.69■□□□□ 0.1
PCDHGC3-205ENST00000617641 CMKLR1Q99788 373 aa15.69■□□□□ 0.1
PCDHGC3-205ENST00000617641 ALG12Q9BV10 488 aa15.69■□□□□ 0.1
PCDHGC3-205ENST00000617641 CCDC86Q9H6F5 360 aaKnown RBP15.69■□□□□ 0.1
PCDHGC3-205ENST00000617641 COPS3Q9UNS2 423 aa15.69■□□□□ 0.1
PCDHGC3-205ENST00000617641 VDAC3Q9Y277 283 aa15.69■□□□□ 0.1
PCDHGC3-205ENST00000617641 GRIP1Q9Y3R0 1128 aa15.69■□□□□ 0.1
PCDHGC3-205ENST00000617641 NOX1Q9Y5S8 564 aa15.69■□□□□ 0.1
PCDHGC3-205ENST00000617641 GLCEO94923 617 aa15.69■□□□□ 0.1
PCDHGC3-205ENST00000617641 MT-ATP6P00846 226 aa15.69■□□□□ 0.1
PCDHGC3-205ENST00000617641 CLDN6P56747 220 aa15.69■□□□□ 0.1
PCDHGC3-205ENST00000617641 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.69■□□□□ 0.1
PCDHGC3-205ENST00000617641 PLA2G2CQ5R387 149 aa15.69■□□□□ 0.1
PCDHGC3-205ENST00000617641 CCDC190Q86UF4 302 aa15.69■□□□□ 0.1
PCDHGC3-205ENST00000617641 NLGN4YQ8NFZ3 816 aaPredicted RBP15.69■□□□□ 0.1
PCDHGC3-205ENST00000617641 LOXL4Q96JB6 756 aa15.69■□□□□ 0.1
PCDHGC3-205ENST00000617641 COQ7Q99807 217 aa15.69■□□□□ 0.1
PCDHGC3-205ENST00000617641 NDEL1Q9GZM8 345 aa15.69■□□□□ 0.1
PCDHGC3-205ENST00000617641 PLEKHB1Q9UF11 243 aaPredicted RBP15.69■□□□□ 0.1
PCDHGC3-205ENST00000617641 PCDHGA5Q9Y5G8 931 aa15.69■□□□□ 0.1
PCDHGC3-205ENST00000617641 HS3ST3B1Q9Y662 390 aa15.69■□□□□ 0.1
PCDHGC3-205ENST00000617641 SHISA3A0PJX4 238 aa15.68■□□□□ 0.1
PCDHGC3-205ENST00000617641 PMS2P1A4D2B8 440 aa15.68■□□□□ 0.1
PCDHGC3-205ENST00000617641 B4E171 279 aa15.68■□□□□ 0.1
PCDHGC3-205ENST00000617641 DCTN6O00399 190 aa15.68■□□□□ 0.1
PCDHGC3-205ENST00000617641 FBXO45P0C2W1 286 aa15.68■□□□□ 0.1
PCDHGC3-205ENST00000617641 COX6A1P12074 109 aa15.68■□□□□ 0.1
PCDHGC3-205ENST00000617641 GRPRP30550 384 aa15.68■□□□□ 0.1
PCDHGC3-205ENST00000617641 TNFSF8P32971 234 aa15.68■□□□□ 0.1
PCDHGC3-205ENST00000617641 PTGDSP41222 190 aa15.68■□□□□ 0.1
PCDHGC3-205ENST00000617641 TSPAN7P41732 249 aa15.68■□□□□ 0.1
PCDHGC3-205ENST00000617641 HTR3AP46098 478 aa15.68■□□□□ 0.1
PCDHGC3-205ENST00000617641 SLC25A1P53007 311 aa15.68■□□□□ 0.1
PCDHGC3-205ENST00000617641 ZNF45Q02386 682 aa15.68■□□□□ 0.1
PCDHGC3-205ENST00000617641 SLC3A1Q07837 685 aa15.68■□□□□ 0.1
PCDHGC3-205ENST00000617641 IL10RAQ13651 578 aa15.68■□□□□ 0.1
PCDHGC3-205ENST00000617641 SGCBQ16585 318 aa15.68■□□□□ 0.1
PCDHGC3-205ENST00000617641 ZNF511Q8NB15 262 aa15.68■□□□□ 0.1
PCDHGC3-205ENST00000617641 NEIL3Q8TAT5 605 aa15.68■□□□□ 0.1
PCDHGC3-205ENST00000617641 ST8SIA1Q92185 356 aa15.68■□□□□ 0.1
PCDHGC3-205ENST00000617641 CEP19Q96LK0 163 aa15.68■□□□□ 0.1
PCDHGC3-205ENST00000617641 METTL7AQ9H8H3 244 aa15.68■□□□□ 0.1
PCDHGC3-205ENST00000617641 MARCH7Q9H992 704 aa15.68■□□□□ 0.1
PCDHGC3-205ENST00000617641 SRA1Q9HD15 236 aaKnown RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms