RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 PCCBP05166 539 aa14.27□□□□□ -0.13
GPN1-212ENST00000616939 ADH1AP07327 375 aa14.27□□□□□ -0.13
GPN1-212ENST00000616939 ADH5P11766 374 aa14.27□□□□□ -0.13
GPN1-212ENST00000616939 CPMP14384 443 aa14.27□□□□□ -0.13
GPN1-212ENST00000616939 HIST1H1CP16403 213 aaKnown RBP14.27□□□□□ -0.13
GPN1-212ENST00000616939 EPCAMP16422 314 aa14.27□□□□□ -0.13
GPN1-212ENST00000616939 MAOBP27338 520 aa14.27□□□□□ -0.13
GPN1-212ENST00000616939 PEBP1P30086 187 aaKnown RBP14.27□□□□□ -0.13
GPN1-212ENST00000616939 PSMB10P40306 273 aa14.27□□□□□ -0.13
GPN1-212ENST00000616939 MAP3K8P41279 467 aa14.27□□□□□ -0.13
GPN1-212ENST00000616939 RPE65Q16518 533 aa14.27□□□□□ -0.13
GPN1-212ENST00000616939 Q499Y3 187 aa14.27□□□□□ -0.13
GPN1-212ENST00000616939 FNDC3BQ53EP0 1204 aaKnown RBP14.27□□□□□ -0.13
GPN1-212ENST00000616939 CLVS2Q5SYC1 327 aa14.27□□□□□ -0.13
GPN1-212ENST00000616939 PDSS1Q5T2R2 415 aa14.27□□□□□ -0.13
GPN1-212ENST00000616939 LRRTM1Q86UE6 522 aa14.27□□□□□ -0.13
GPN1-212ENST00000616939 PAQR7Q86WK9 346 aa14.27□□□□□ -0.13
GPN1-212ENST00000616939 CCDC36Q8IYA8 594 aa14.27□□□□□ -0.13
GPN1-212ENST00000616939 ZNF433Q8N7K0 673 aaPredicted RBP14.27□□□□□ -0.13
GPN1-212ENST00000616939 COX18Q8N8Q8 333 aa14.27□□□□□ -0.13
GPN1-212ENST00000616939 SDR9C7Q8NEX9 313 aa14.27□□□□□ -0.13
GPN1-212ENST00000616939 PXYLP1Q8TE99 480 aa14.27□□□□□ -0.13
GPN1-212ENST00000616939 ST8SIA2Q92186 375 aa14.27□□□□□ -0.13
GPN1-212ENST00000616939 RNF166Q96A37 237 aaPredicted RBP14.27□□□□□ -0.13
GPN1-212ENST00000616939 TTTY10Q9BZA0 68 aa14.27□□□□□ -0.13
GPN1-212ENST00000616939 BARX1Q9HBU1 254 aaPredicted RBP14.27□□□□□ -0.13
GPN1-212ENST00000616939 C2orf42Q9NWW7 574 aa14.27□□□□□ -0.13
GPN1-212ENST00000616939 FLRT3Q9NZU0 649 aa14.27□□□□□ -0.13
GPN1-212ENST00000616939 H3BUI4 141 aa14.26□□□□□ -0.13
GPN1-212ENST00000616939 BRINP1O60477 761 aa14.26□□□□□ -0.13
GPN1-212ENST00000616939 CD8AP01732 235 aa14.26□□□□□ -0.13
GPN1-212ENST00000616939 AKAIN1P0CW23 69 aa14.26□□□□□ -0.13
GPN1-212ENST00000616939 HOXA1P49639 335 aaPredicted RBP14.26□□□□□ -0.13
GPN1-212ENST00000616939 ZNF345Q14585 488 aa14.26□□□□□ -0.13
GPN1-212ENST00000616939 FAAP20Q6NZ36 180 aa14.26□□□□□ -0.13
GPN1-212ENST00000616939 DPY19L2P2Q6ZN68 376 aa14.26□□□□□ -0.13
GPN1-212ENST00000616939 DEFB128Q7Z7B8 93 aa14.26□□□□□ -0.13
GPN1-212ENST00000616939 MUC20Q8N307 709 aaPredicted RBP14.26□□□□□ -0.13
GPN1-212ENST00000616939 C7orf57Q8NEG2 295 aa14.26□□□□□ -0.13
GPN1-212ENST00000616939 OR52E1Q8NGJ3 308 aa14.26□□□□□ -0.13
GPN1-212ENST00000616939 OR4K13Q8NH42 304 aa14.26□□□□□ -0.13
GPN1-212ENST00000616939 CCDC107Q8WV48 283 aa14.26□□□□□ -0.13
GPN1-212ENST00000616939 HMGB4Q8WW32 186 aa14.26□□□□□ -0.13
GPN1-212ENST00000616939 PHYHIPLQ96FC7 376 aa14.26□□□□□ -0.13
GPN1-212ENST00000616939 LRRC46Q96FV0 321 aa14.26□□□□□ -0.13
GPN1-212ENST00000616939 SERINC2Q96SA4 455 aa14.26□□□□□ -0.13
GPN1-212ENST00000616939 SMAD5Q99717 465 aaKnown RBP14.26□□□□□ -0.13
GPN1-212ENST00000616939 LGR4Q9BXB1 951 aa14.26□□□□□ -0.13
GPN1-212ENST00000616939 NKX6-2Q9C056 277 aaPredicted RBP14.26□□□□□ -0.13
GPN1-212ENST00000616939 SLC6A17Q9H1V8 727 aa14.26□□□□□ -0.13
GPN1-212ENST00000616939 SYNPO2LQ9H987 977 aa14.26□□□□□ -0.13
GPN1-212ENST00000616939 TCF7L1Q9HCS4 588 aa14.26□□□□□ -0.13
GPN1-212ENST00000616939 YBX2Q9Y2T7 364 aaKnown RBP14.26□□□□□ -0.13
GPN1-212ENST00000616939 TRBV5-7A0A0A0MS05 114 aa14.25□□□□□ -0.13
GPN1-212ENST00000616939 C1QTNF3-AMACRE9PGA6 284 aa14.25□□□□□ -0.13
GPN1-212ENST00000616939 PEX12O00623 359 aa14.25□□□□□ -0.13
GPN1-212ENST00000616939 NUPL2O15504 423 aaKnown RBP14.25□□□□□ -0.13
GPN1-212ENST00000616939 SIX6O95475 246 aa14.25□□□□□ -0.13
GPN1-212ENST00000616939 RLN2P04090 185 aa14.25□□□□□ -0.13
GPN1-212ENST00000616939 SMIM10L1P0DMW3 83 aa14.25□□□□□ -0.13
GPN1-212ENST00000616939 SPI1P17947 270 aa14.25□□□□□ -0.13
GPN1-212ENST00000616939 MST1P26927 711 aa14.25□□□□□ -0.13
GPN1-212ENST00000616939 RPS15AP62244 130 aaKnown RBP14.25□□□□□ -0.13
GPN1-212ENST00000616939 RPS15P62841 145 aaKnown RBP14.25□□□□□ -0.13
GPN1-212ENST00000616939 S100A12P80511 92 aa14.25□□□□□ -0.13
GPN1-212ENST00000616939 LTBQ06643 244 aa14.25□□□□□ -0.13
GPN1-212ENST00000616939 TOMM20Q15388 145 aa14.25□□□□□ -0.13
GPN1-212ENST00000616939 PCGF3Q3KNV8 242 aa14.25□□□□□ -0.13
GPN1-212ENST00000616939 CCDC157Q569K6 752 aa14.25□□□□□ -0.13
GPN1-212ENST00000616939 STPG1Q5TH74 334 aa14.25□□□□□ -0.13
GPN1-212ENST00000616939 VN1R4Q7Z5H5 301 aa14.25□□□□□ -0.13
GPN1-212ENST00000616939 ZNF227Q86WZ6 799 aa14.25□□□□□ -0.13
GPN1-212ENST00000616939 KCNRGQ8N5I3 272 aa14.25□□□□□ -0.13
GPN1-212ENST00000616939 NPEPL1Q8NDH3 523 aa14.25□□□□□ -0.13
GPN1-212ENST00000616939 HOXB13Q92826 284 aaPredicted RBP14.25□□□□□ -0.13
GPN1-212ENST00000616939 SMIM10Q96HG1 83 aa14.25□□□□□ -0.13
GPN1-212ENST00000616939 HSPA12BQ96MM6 686 aa14.25□□□□□ -0.13
GPN1-212ENST00000616939 SLC17A5Q9NRA2 495 aa14.25□□□□□ -0.13
GPN1-212ENST00000616939 USP36Q9P275 1121 aaKnown RBP14.25□□□□□ -0.13
GPN1-212ENST00000616939 GMEB2Q9UKD1 530 aa14.25□□□□□ -0.13
GPN1-212ENST00000616939 EML5Q05BV3 1969 aa14.25□□□□□ -0.13
GPN1-212ENST00000616939 TRAV14DV4A0A0A6YYC5 116 aa14.25□□□□□ -0.13
GPN1-212ENST00000616939 TMEM272A0A1B0GTI8 110 aa14.25□□□□□ -0.13
GPN1-212ENST00000616939 CHURC1-FNTBB4DL54 471 aa14.25□□□□□ -0.13
GPN1-212ENST00000616939 LDB3O75112 727 aa14.25□□□□□ -0.13
GPN1-212ENST00000616939 GLCEO94923 617 aa14.25□□□□□ -0.13
GPN1-212ENST00000616939 ZFPL1O95159 310 aa14.25□□□□□ -0.13
GPN1-212ENST00000616939 PMS2P2O95744 297 aa14.25□□□□□ -0.13
GPN1-212ENST00000616939 TACSTD2P09758 323 aa14.25□□□□□ -0.13
GPN1-212ENST00000616939 ADRA2CP18825 462 aa14.25□□□□□ -0.13
GPN1-212ENST00000616939 ITPKBP27987 946 aa14.25□□□□□ -0.13
GPN1-212ENST00000616939 P2RY2P41231 377 aa14.25□□□□□ -0.13
GPN1-212ENST00000616939 CLDN12P56749 244 aa14.25□□□□□ -0.13
GPN1-212ENST00000616939 NANOS3P60323 173 aaKnown RBP14.25□□□□□ -0.13
GPN1-212ENST00000616939 GPR162Q16538 588 aa14.25□□□□□ -0.13
GPN1-212ENST00000616939 DCAF12L2Q5VW00 463 aa14.25□□□□□ -0.13
GPN1-212ENST00000616939 LPCAT3Q6P1A2 487 aa14.25□□□□□ -0.13
GPN1-212ENST00000616939 ANKRD16Q6P6B7 361 aa14.25□□□□□ -0.13
GPN1-212ENST00000616939 RTL10Q7L3V2 364 aa14.25□□□□□ -0.13
GPN1-212ENST00000616939 ZNF595Q8IYB9 648 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms