RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 CPPED1Q9BRF8 314 aaPredicted RBP16.64■□□□□ 0.25
CDX1-202ENST00000616154 CACNG6Q9BXT2 260 aa16.64■□□□□ 0.25
CDX1-202ENST00000616154 ARMC7Q9H6L4 198 aa16.64■□□□□ 0.25
CDX1-202ENST00000616154 IGHV4-30-2A0A087WSY4 118 aa16.63■□□□□ 0.25
CDX1-202ENST00000616154 A0A096LNT2 108 aa16.63■□□□□ 0.25
CDX1-202ENST00000616154 PDLIM1O00151 329 aa16.63■□□□□ 0.25
CDX1-202ENST00000616154 EIF1BO60739 113 aaKnown RBP16.63■□□□□ 0.25
CDX1-202ENST00000616154 FZD7O75084 574 aa16.63■□□□□ 0.25
CDX1-202ENST00000616154 ITGA5P08648 1049 aa16.63■□□□□ 0.25
CDX1-202ENST00000616154 GKN3PP0CG01 181 aa16.63■□□□□ 0.25
CDX1-202ENST00000616154 IMPDH2P12268 514 aa16.63■□□□□ 0.25
CDX1-202ENST00000616154 NUDT6P53370 316 aa16.63■□□□□ 0.25
CDX1-202ENST00000616154 OR2B6P58173 313 aa16.63■□□□□ 0.25
CDX1-202ENST00000616154 DSCR9P59020 149 aa16.63■□□□□ 0.25
CDX1-202ENST00000616154 ADRM1Q16186 407 aa16.63■□□□□ 0.25
CDX1-202ENST00000616154 RUNDC3AQ59EK9 446 aa16.63■□□□□ 0.25
CDX1-202ENST00000616154 HMBOX1Q6NT76 420 aa16.63■□□□□ 0.25
CDX1-202ENST00000616154 B3GLCTQ6Y288 498 aa16.63■□□□□ 0.25
CDX1-202ENST00000616154 CCDC103Q8IW40 242 aa16.63■□□□□ 0.25
CDX1-202ENST00000616154 MUC15Q8N387 334 aa16.63■□□□□ 0.25
CDX1-202ENST00000616154 RBM15BQ8NDT2 890 aaKnown RBP16.63■□□□□ 0.25
CDX1-202ENST00000616154 OR10H5Q8NGA6 315 aa16.63■□□□□ 0.25
CDX1-202ENST00000616154 DNAJA3Q96EY1 480 aa16.63■□□□□ 0.25
CDX1-202ENST00000616154 HOPXQ9BPY8 73 aaPredicted RBP16.63■□□□□ 0.25
CDX1-202ENST00000616154 AMBRA1Q9C0C7 1298 aa16.63■□□□□ 0.25
CDX1-202ENST00000616154 TAS2R1Q9NYW7 299 aa16.63■□□□□ 0.25
CDX1-202ENST00000616154 POU2F3Q9UKI9 436 aa16.63■□□□□ 0.25
CDX1-202ENST00000616154 ZC3H12DA2A288 527 aaKnown RBP16.62■□□□□ 0.25
CDX1-202ENST00000616154 B2RBV5 119 aa16.62■□□□□ 0.25
CDX1-202ENST00000616154 TMEM229AB2RXF0 380 aa16.62■□□□□ 0.25
CDX1-202ENST00000616154 NPIPB7O75200 414 aa16.62■□□□□ 0.25
CDX1-202ENST00000616154 PRG2P13727 222 aa16.62■□□□□ 0.25
CDX1-202ENST00000616154 SLC6A2P23975 617 aa16.62■□□□□ 0.25
CDX1-202ENST00000616154 FOXG1P55316 489 aaPredicted RBP16.62■□□□□ 0.25
CDX1-202ENST00000616154 SLC35A1P78382 337 aa16.62■□□□□ 0.25
CDX1-202ENST00000616154 CDK6Q00534 326 aa16.62■□□□□ 0.25
CDX1-202ENST00000616154 ZSCAN26Q16670 478 aa16.62■□□□□ 0.25
CDX1-202ENST00000616154 ZNF311Q5JNZ3 666 aa16.62■□□□□ 0.25
CDX1-202ENST00000616154 NANOGP8Q6NSW7 305 aa16.62■□□□□ 0.25
CDX1-202ENST00000616154 REEP3Q6NUK4 255 aa16.62■□□□□ 0.25
CDX1-202ENST00000616154 PODNL1Q6PEZ8 512 aa16.62■□□□□ 0.25
CDX1-202ENST00000616154 DHRS4L2Q6PKH6 230 aa16.62■□□□□ 0.25
CDX1-202ENST00000616154 PAQR6Q6TCH4 344 aa16.62■□□□□ 0.25
CDX1-202ENST00000616154 CLEC2AQ6UVW9 174 aa16.62■□□□□ 0.25
CDX1-202ENST00000616154 RINLQ6ZS11 566 aa16.62■□□□□ 0.25
CDX1-202ENST00000616154 CCDC121Q6ZUS5 278 aa16.62■□□□□ 0.25
CDX1-202ENST00000616154 SERPINA11Q86U17 422 aa16.62■□□□□ 0.25
CDX1-202ENST00000616154 PGAM4Q8N0Y7 254 aa16.62■□□□□ 0.25
CDX1-202ENST00000616154 FBXL14Q8N1E6 418 aa16.62■□□□□ 0.25
CDX1-202ENST00000616154 OR8J3Q8NGG0 315 aa16.62■□□□□ 0.25
CDX1-202ENST00000616154 NANOGQ9H9S0 305 aa16.62■□□□□ 0.25
CDX1-202ENST00000616154 CACYBPQ9HB71 228 aaKnown RBP16.62■□□□□ 0.25
CDX1-202ENST00000616154 NDE1Q9NXR1 346 aa16.62■□□□□ 0.25
CDX1-202ENST00000616154 ABCD2Q9UBJ2 740 aa16.62■□□□□ 0.25
CDX1-202ENST00000616154 SLC9A8Q9Y2E8 581 aa16.62■□□□□ 0.25
CDX1-202ENST00000616154 A0A1W2PR80 420 aa16.61■□□□□ 0.25
CDX1-202ENST00000616154 A8MV72 311 aaPredicted RBP16.61■□□□□ 0.25
CDX1-202ENST00000616154 C5orf58C9J3I9 102 aa16.61■□□□□ 0.25
CDX1-202ENST00000616154 M0R1B8 84 aa16.61■□□□□ 0.25
CDX1-202ENST00000616154 IFNA2P01563 188 aa16.61■□□□□ 0.25
CDX1-202ENST00000616154 CCNA2P20248 432 aa16.61■□□□□ 0.25
CDX1-202ENST00000616154 COPZ1P61923 177 aa16.61■□□□□ 0.25
CDX1-202ENST00000616154 ZNF544Q6NX49 715 aa16.61■□□□□ 0.25
CDX1-202ENST00000616154 CASP12Q6UXS9 341 aa16.61■□□□□ 0.25
CDX1-202ENST00000616154 ARPINQ7Z6K5 226 aa16.61■□□□□ 0.25
CDX1-202ENST00000616154 DEPDC4Q8N2C3 294 aa16.61■□□□□ 0.25
CDX1-202ENST00000616154 C17orf78Q8N4C9 275 aa16.61■□□□□ 0.25
CDX1-202ENST00000616154 C1orf162Q8NEQ5 155 aaPredicted RBP16.61■□□□□ 0.25
CDX1-202ENST00000616154 OR52E4Q8NGH9 312 aa16.61■□□□□ 0.25
CDX1-202ENST00000616154 NFKBIDQ8NI38 313 aa16.61■□□□□ 0.25
CDX1-202ENST00000616154 C3orf49Q96BT1 292 aa16.61■□□□□ 0.25
CDX1-202ENST00000616154 REPIN1Q9BWE0 567 aaKnown RBP16.61■□□□□ 0.25
CDX1-202ENST00000616154 PIF1Q9H611 641 aa16.61■□□□□ 0.25
CDX1-202ENST00000616154 C12orf10Q9HB07 376 aa16.61■□□□□ 0.25
CDX1-202ENST00000616154 PARPBPQ9NWS1 579 aa16.61■□□□□ 0.25
CDX1-202ENST00000616154 FLVCR1Q9Y5Y0 555 aa16.61■□□□□ 0.25
CDX1-202ENST00000616154 ARFGEF3Q5TH69 2177 aa16.6■□□□□ 0.25
CDX1-202ENST00000616154 LIPT2A6NK58 231 aa16.6■□□□□ 0.25
CDX1-202ENST00000616154 ELOA3DA6NLF2 546 aaPredicted RBP16.6■□□□□ 0.25
CDX1-202ENST00000616154 A8MVM7 634 aa16.6■□□□□ 0.25
CDX1-202ENST00000616154 EVPLLA8MZ36 301 aa16.6■□□□□ 0.25
CDX1-202ENST00000616154 H7C417 338 aa16.6■□□□□ 0.25
CDX1-202ENST00000616154 GPRIN2O60269 458 aa16.6■□□□□ 0.25
CDX1-202ENST00000616154 FABP6P51161 128 aa16.6■□□□□ 0.25
CDX1-202ENST00000616154 PCBP3P57721 371 aaKnown RBP16.6■□□□□ 0.25
CDX1-202ENST00000616154 NCALDP61601 193 aa16.6■□□□□ 0.25
CDX1-202ENST00000616154 SLC25A3Q00325 362 aa16.6■□□□□ 0.25
CDX1-202ENST00000616154 SLC17A1Q14916 467 aa16.6■□□□□ 0.25
CDX1-202ENST00000616154 ELOA3BQ3SY89 546 aa16.6■□□□□ 0.25
CDX1-202ENST00000616154 C1QTNF12Q5T7M4 302 aa16.6■□□□□ 0.25
CDX1-202ENST00000616154 NET1Q7Z628 596 aaPredicted RBP16.6■□□□□ 0.25
CDX1-202ENST00000616154 LSMEM1Q8N8F7 131 aa16.6■□□□□ 0.25
CDX1-202ENST00000616154 WDR31Q8NA23 367 aa16.6■□□□□ 0.25
CDX1-202ENST00000616154 ELOA3Q8NG57 546 aa16.6■□□□□ 0.25
CDX1-202ENST00000616154 NAA11Q9BSU3 229 aaPredicted RBP16.6■□□□□ 0.25
CDX1-202ENST00000616154 SPATA5L1Q9BVQ7 753 aa16.6■□□□□ 0.25
CDX1-202ENST00000616154 UPB1Q9UBR1 384 aa16.6■□□□□ 0.25
CDX1-202ENST00000616154 AMDHD2Q9Y303 409 aa16.6■□□□□ 0.25
CDX1-202ENST00000616154 GPIP06744 558 aa16.59■□□□□ 0.25
CDX1-202ENST00000616154 CXCR1P25024 350 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms