RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 TMEM43Q9BTV4 400 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 HCAR1Q9BXC0 346 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 PLA2G2FQ9BZM2 168 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 MGAT4AQ9UM21 535 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 CAMK2AQ9UQM7 478 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 CENPVL1A0A0U1RR11 272 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 FAM25EA8MYX2 175 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 H3BML4 177 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 PLA2G10O15496 165 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 CFIP05156 583 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 COL9A1P20849 921 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 LCN1P31025 176 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 NUDT1P36639 197 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 PPICP45877 212 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 MRPS10P82664 201 aaKnown RBP5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 PSG6Q00889 435 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 GALEQ14376 348 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 SLC25A30Q5SVS4 291 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 TMEM225Q6GV28 225 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 CBLN3Q6UW01 205 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 SLC35F3Q8IY50 421 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 ELMOD2Q8IZ81 293 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 DUSP19Q8WTR2 217 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 FCAMRQ8WWV6 532 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 ELMOD3Q96FG2 381 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 C10orf90Q96M02 699 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 LMF1Q96S06 567 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 OR10A4Q9H209 315 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 CUTCQ9NTM9 273 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 CES1P1Q9UKY3 287 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 ALG5Q9Y673 324 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 TLCD2A6NGC4 264 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 NPIPA5E9PKD4 350 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 LINC01565O15544 149 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 ATF1P18846 271 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 FRKP42685 505 aaPredicted RBP5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 OR3A3P47888 321 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 OR3A2P47893 321 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 ZNF79Q15937 498 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 SLC35F2Q8IXU6 374 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 FAM160A2Q8N612 972 aaPredicted RBP5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 OR13C5Q8NGS8 318 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 C3orf49Q96BT1 292 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 RASD2Q96D21 266 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 TCTN2Q96GX1 697 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 ABHD1Q96SE0 405 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 MED18Q9BUE0 208 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 DPCDQ9BVM2 203 aaPredicted RBP5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 SEMA6CQ9H3T2 930 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 EXO5Q9H790 373 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 PTGES2Q9H7Z7 377 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 ISG20L2Q9H9L3 353 aaKnown RBP5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 MEPEQ9NQ76 525 aaPredicted RBP5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 NPIPA1Q9UND3 350 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 ZNF281Q9Y2X9 895 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 A0A1B0GVI7 797 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 C5orf67F2Z3F1 127 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 ZFPL1O95159 310 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 ECDO95905 644 aaPredicted RBP5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 GTF2F2P13984 249 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 SPI1P17947 270 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 PTH2RP49190 550 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 AP2S1P53680 142 aaPredicted RBP5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 EMP2P54851 167 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 PPP1CAP62136 330 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 SQSTM1Q13501 440 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 SCGB2B2Q4G0G5 96 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 DNAAF1Q8NEP3 725 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 OR4K17Q8NGC6 315 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 LCORQ96JN0 433 aaPredicted RBP5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 DERL3Q96Q80 235 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 TMEM185BQ9H7F4 350 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 ZNF304Q9HCX3 659 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 PLEKHB1Q9UF11 243 aaPredicted RBP5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 PCOLCE2Q9UKZ9 415 aa5.18□□□□□ -1.58
SYNCRIP-204ENST00000616122 LOC100509620A0A075B734 347 aa5.17□□□□□ -1.58
SYNCRIP-204ENST00000616122 KDM4EB2RXH2 506 aaPredicted RBP5.17□□□□□ -1.58
SYNCRIP-204ENST00000616122 EIF1AYO14602 144 aaKnown RBP5.17□□□□□ -1.58
SYNCRIP-204ENST00000616122 KLK3P07288 261 aaPredicted RBP5.17□□□□□ -1.58
SYNCRIP-204ENST00000616122 CLUP10909 449 aa5.17□□□□□ -1.58
SYNCRIP-204ENST00000616122 SLC2A5P22732 501 aa5.17□□□□□ -1.58
SYNCRIP-204ENST00000616122 DDOSTP39656 456 aa5.17□□□□□ -1.58
SYNCRIP-204ENST00000616122 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.17□□□□□ -1.589e-7■■■■■ 34.3
SYNCRIP-204ENST00000616122 DPY19L2P2Q6ZN68 376 aa5.17□□□□□ -1.58
SYNCRIP-204ENST00000616122 SIAH3Q8IW03 269 aa5.17□□□□□ -1.58
SYNCRIP-204ENST00000616122 SMIM19Q96E16 107 aa5.17□□□□□ -1.58
SYNCRIP-204ENST00000616122 SLC46A1Q96NT5 459 aa5.17□□□□□ -1.58
SYNCRIP-204ENST00000616122 FOXN4Q96NZ1 517 aa5.17□□□□□ -1.58
SYNCRIP-204ENST00000616122 PPP1R3EQ9H7J1 279 aa5.17□□□□□ -1.58
SYNCRIP-204ENST00000616122 EVA1AQ9H8M9 152 aa5.17□□□□□ -1.58
SYNCRIP-204ENST00000616122 INIPQ9NRY2 104 aa5.17□□□□□ -1.58
SYNCRIP-204ENST00000616122 ACOXLQ9NUZ1 547 aa5.17□□□□□ -1.58
SYNCRIP-204ENST00000616122 TAS2R8Q9NYW2 309 aa5.17□□□□□ -1.58
SYNCRIP-204ENST00000616122 ATXN7L1Q9ULK2 861 aaPredicted RBP5.17□□□□□ -1.58
SYNCRIP-204ENST00000616122 SRPK3Q9UPE1 567 aa5.17□□□□□ -1.58
SYNCRIP-204ENST00000616122 A0A0B4J2E0 115 aa5.17□□□□□ -1.58
SYNCRIP-204ENST00000616122 A0A1B0GX12 115 aa5.17□□□□□ -1.58
SYNCRIP-204ENST00000616122 ZNF726A6NNF4 738 aa5.17□□□□□ -1.58
SYNCRIP-204ENST00000616122 NARSO43776 548 aaKnown RBP5.17□□□□□ -1.58
SYNCRIP-204ENST00000616122 BRINP1O60477 761 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms