RNA–Protein interactions for RNA: ENST00000614971.4

LTN1-207, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,756 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-207ENST00000614971 POLHQ9Y253 713 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 PCDHGB6Q9Y5F9 930 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 PCDHGA10Q9Y5H3 936 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 SPTY2D1-AS1A0A0U1RR47 76 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 FAM221AA4D161 298 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 I3L521 148 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 P2RY10O00398 339 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 AGPAT2O15120 278 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 RGS9O75916 674 aaPredicted RBP3.5□□□□□ -1.85
LTN1-207ENST00000614971 CER1O95813 267 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 HPRP00739 348 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 IFNGR1P15260 489 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 GIFP27352 417 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 S100GP29377 79 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 FRKP42685 505 aaPredicted RBP3.5□□□□□ -1.85
LTN1-207ENST00000614971 MAP2K3P46734 347 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 CSNK1A1P48729 337 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 TIAL1Q01085 375 aaKnown RBP eCLIP3.5□□□□□ -1.85
LTN1-207ENST00000614971 LSAMPQ13449 338 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 TMEM44Q2T9K0 475 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 COL28A1Q2UY09 1125 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 GLT8D1Q68CQ7 371 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 MEX3BQ6ZN04 569 aaKnown RBP3.5□□□□□ -1.85
LTN1-207ENST00000614971 PTOV1Q86YD1 416 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 GRAMD2AQ8IUY3 354 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 ELMOD2Q8IZ81 293 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 ABHD5Q8WTS1 349 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 PIGTQ969N2 578 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 LCORQ96JN0 433 aaPredicted RBP3.5□□□□□ -1.85
LTN1-207ENST00000614971 RNF170Q96K19 258 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 LYSMD1Q96S90 227 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 TUBA1CQ9BQE3 449 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 ZNF471Q9BX82 626 aaPredicted RBP3.5□□□□□ -1.85
LTN1-207ENST00000614971 SLC5A7Q9GZV3 580 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 MMP27Q9H306 513 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 PCDHGB1Q9Y5G3 927 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 CDH23Q9H251 3354 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 TMED7-TICAM2A0A0A6YYA0 188 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 CTSBP07858 339 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 ZNF12P17014 697 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 TNFSF8P32971 234 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 GRK5P34947 590 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 FOXK2Q01167 660 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 CDKL4Q5MAI5 379 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 FBXO42Q6P3S6 717 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 KIF18BQ86Y91 864 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 MISPQ8IVT2 679 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 SLC35F3Q8IY50 421 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 ZNF565Q8N9K5 539 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 OR5T1Q8NG75 326 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 OR5M9Q8NGP3 310 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 OR1J4Q8NGS1 313 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 ZNF431Q8TF32 576 aaPredicted RBP3.5□□□□□ -1.85
LTN1-207ENST00000614971 YTHDF1Q9BYJ9 559 aaKnown RBP3.5□□□□□ -1.85
LTN1-207ENST00000614971 TWSG1Q9GZX9 223 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 HINT3Q9NQE9 182 aaKnown RBP3.5□□□□□ -1.85
LTN1-207ENST00000614971 MGAT4CQ9UBM8 478 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 RALYQ9UKM9 306 aaKnown RBP3.5□□□□□ -1.85
LTN1-207ENST00000614971 SRPK3Q9UPE1 567 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 TMED7Q9Y3B3 224 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 FOCADQ5VW36 1801 aa3.5□□□□□ -1.85
LTN1-207ENST00000614971 TRBV5-4A0A0C4DH59 114 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 A0A1B0GX78 115 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 NUPL2O15504 423 aaKnown RBP3.49□□□□□ -1.85
LTN1-207ENST00000614971 KCNK2O95069 426 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 GUSBP08236 651 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 CCL4P13236 92 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 HIST1H1CP16403 213 aaKnown RBP3.49□□□□□ -1.85
LTN1-207ENST00000614971 HTR4Q13639 388 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 EFR3AQ14156 821 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 PDCD1Q15116 288 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 RSU1Q15404 277 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 SF3A2Q15428 464 aaKnown RBP3.49□□□□□ -1.85
LTN1-207ENST00000614971 NDUFA5Q16718 116 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 CHRFAM7AQ494W8 412 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 SLC7A5P1Q8MH63 180 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 TMEM99Q8N816 258 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 OR51T1Q8NGJ9 327 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 MIB2Q96AX9 1013 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 SGPP1Q9BX95 441 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 PLA2G12AQ9BZM1 189 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 SEMA4CQ9C0C4 833 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 ACTR6Q9GZN1 396 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 B3GAT2Q9NPZ5 323 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 COA3Q9Y2R0 106 aaPredicted RBP3.49□□□□□ -1.85
LTN1-207ENST00000614971 NRXN2Q9P2S2 1712 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 A0A0X1KG70 313 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 FITM1A5D6W6 292 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 A6NHS1 94 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 OR7C1O76099 320 aaPredicted RBP3.49□□□□□ -1.85
LTN1-207ENST00000614971 OXSR1O95747 527 aaPredicted RBP3.49□□□□□ -1.85
LTN1-207ENST00000614971 CHRNB1P11230 501 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 CDAP32320 146 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 DLSTP36957 453 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 SRP9P49458 86 aaKnown RBP3.49□□□□□ -1.85
LTN1-207ENST00000614971 ETV1P50549 477 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 HERV-K104P61576 105 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 TUBA1BP68363 451 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 FGFBP1Q14512 234 aa3.49□□□□□ -1.85
LTN1-207ENST00000614971 GGTA1PQ4G0N0 100 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms