RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 ARPC4-TTLL3A0A0A6YYG9 625 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 CENPVL1A0A0U1RR11 272 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 H0YIG0 161 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 PLPP2O43688 288 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 PPM1BO75688 479 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 WNT1P04628 370 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 CSN2P05814 226 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 CLUP10909 449 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 NOS3P29474 1203 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 PITPNBP48739 271 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 TAS2R43P59537 309 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 E2F1Q01094 437 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 PRPF38BQ5VTL8 546 aaKnown RBP9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 OGFOD3Q6PK18 319 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 NLRC3Q7RTR2 1065 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 DGLUCYQ7Z3D6 616 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 GPALPP1Q8IXQ4 340 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 ZNF440Q8IYI8 595 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 CDK20Q8IZL9 346 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 OR52L1Q8NGH7 329 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 SAMD8Q96LT4 415 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 TMEM27Q9HBJ8 222 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 SEMA5BQ9P283 1151 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 SLC35A3Q9Y2D2 325 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 MED31Q9Y3C7 131 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 GMDSO60547 372 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 FZD7O75084 574 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 LPLP06858 475 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 NAA10P41227 235 aaPredicted RBP9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 GPR3P46089 330 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 GCGRP47871 477 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 EPHA4P54764 986 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 HSD17B7P56937 341 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 IGSF11Q5DX21 431 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 C3P1Q6ZMU1 363 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 NDUFAF7Q7L592 441 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 PRSS41Q7RTY9 318 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 RD3Q7Z3Z2 195 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 OR51A7Q8NH64 312 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 FANK1Q8TC84 345 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 ZDHHC1Q8WTX9 485 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 BPIFA2Q96DR5 249 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 TOE1Q96GM8 510 aaKnown RBP9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 GPX7Q96SL4 187 aaPredicted RBP9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 ZCCHC4Q9H5U6 513 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 IFT46Q9NQC8 304 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 EXOSC3Q9NQT5 275 aaKnown RBP9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 PFDN2Q9UHV9 154 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 PCDHGB7Q9Y5F8 929 aa9.95□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 FAM171A2A8MVW0 826 aa9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 C2CD4DB7Z1M9 353 aa9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 TPOP07202 933 aa9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 RNH1P13489 461 aaKnown RBP9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 NT5EP21589 574 aa9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 PSMA6P60900 246 aaKnown RBP9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 HHEXQ03014 270 aa9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 TDGQ13569 410 aa9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 LRFN4Q6PJG9 635 aa9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 MCATQ8IVS2 390 aaKnown RBP9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 OR4N5Q8IXE1 308 aa9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 ARL14Q8N4G2 192 aa9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 ACBD7Q8N6N7 88 aa9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 TMEM99Q8N816 258 aa9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 OR8S1Q8NH09 359 aa9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 HSD17B8Q92506 261 aa9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 C3orf49Q96BT1 292 aa9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 C12orf10Q9HB07 376 aa9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 BABAM2Q9NXR7 383 aa9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 TNRC18O15417 2968 aaPredicted RBP9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 TEX51A0A1B0GUA7 166 aa9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 A0A1W2PR77 199 aa9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 FAM86C2PA6NEL3 165 aa9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 ATG12O94817 140 aa9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 CLPSP04118 112 aa9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 THEGLP0DJG4 465 aa9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 PSMB10P40306 273 aa9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 RAD52P43351 418 aa9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 GDI2P50395 445 aaKnown RBP9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 ACTC1P68032 377 aa9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 ACTA1P68133 377 aa9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 BMP8AQ7Z5Y6 402 aa9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 FGD2Q7Z6J4 655 aa9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 TPRA1Q86W33 373 aa9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 CADM4Q8NFZ8 388 aa9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 OR10G6Q8NH81 332 aa9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 RPS4Y2Q8TD47 263 aa9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 MEPEQ9NQ76 525 aaPredicted RBP9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 SLCO1C1Q9NYB5 712 aa9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 COPZ2Q9P299 210 aa9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 MLXQ9UH92 298 aa9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 FBXL4Q9UKA2 621 aa9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 MRPS33Q9Y291 106 aaKnown RBP9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 H3BMH7 237 aa9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 PRAMEF2O60811 474 aa9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 LDB3O75112 727 aa9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 NME1P15531 152 aaKnown RBP9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 GABRA3P34903 492 aa9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 CAPZBP47756 277 aa9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 ZNHIT3Q15649 155 aaPredicted RBP9.94□□□□□ -0.82
SENP3-EIF4A1-201ENST00000614237 TP53I3Q53FA7 332 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms