RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 ACTA1P68133 377 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 GUCA2AQ02747 115 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 CBLN3Q6UW01 205 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 SLC35D2Q76EJ3 337 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 BTN2A1Q7KYR7 527 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 TAF8Q7Z7C8 310 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 C7orf61Q8IZ16 206 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 DEFB119Q8N690 84 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 OR56B4Q8NH76 319 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 PHOSPHO1Q8TCT1 267 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 OR1F2PQ96R84 312 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 GFI1Q99684 422 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 ZNF436Q9C0F3 470 aaPredicted RBP12.86□□□□□ -0.35
COL6A1-207ENST00000612273 TMEM138Q9NPI0 162 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 SLC6A5Q9Y345 797 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 FXYD6-FXYD2A0A087WZ82 144 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 IFITM5A6NNB3 132 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 SIGLEC5O15389 551 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 SC5DO75845 299 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 SERPINA3P01011 423 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 TPOP07202 933 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 CDKN2AP42771 156 aaKnown RBP12.86□□□□□ -0.35
COL6A1-207ENST00000612273 PSMA6P60900 246 aaKnown RBP12.86□□□□□ -0.35
COL6A1-207ENST00000612273 SIGLEC14Q08ET2 396 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 KLF9Q13886 244 aaPredicted RBP12.86□□□□□ -0.35
COL6A1-207ENST00000612273 MELKQ14680 651 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 SLC25A38Q96DW6 304 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 GPR137Q96N19 417 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 MOGAT1Q96PD6 335 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 RBP7Q96R05 134 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 ALG12Q9BV10 488 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 FXYD6Q9H0Q3 95 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 CAMK2AQ9UQM7 478 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 B4DGG1 531 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 PLRG1O43660 514 aaKnown RBP12.86□□□□□ -0.35
COL6A1-207ENST00000612273 NUDT14O95848 222 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 CSN2P05814 226 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 OR2T7P0C7T2 308 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 NTSR1P30989 418 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 PUDPQ08623 228 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 C19orf57Q0VDD7 668 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 ILF3Q12906 894 aaKnown RBP eCLIP12.86□□□□□ -0.35
COL6A1-207ENST00000612273 LIPNQ5VXI9 398 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 DPY19L4Q7Z388 723 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 CA13Q8N1Q1 262 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 OR2T27Q8NH04 317 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 SMIM4Q8WVI0 70 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 ANKRD9Q96BM1 317 aaPredicted RBP12.86□□□□□ -0.35
COL6A1-207ENST00000612273 NRSN2Q9GZP1 204 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 PCDHGA5Q9Y5G8 931 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 LOC100509620A0A075B734 347 aa12.85□□□□□ -0.35
COL6A1-207ENST00000612273 TGFBR3LH3BV60 316 aa12.85□□□□□ -0.35
COL6A1-207ENST00000612273 LIPCP11150 499 aa12.85□□□□□ -0.35
COL6A1-207ENST00000612273 ATF4P18848 351 aaPredicted RBP12.85□□□□□ -0.35
COL6A1-207ENST00000612273 CTXN1P60606 82 aa12.85□□□□□ -0.35
COL6A1-207ENST00000612273 MGAT2Q10469 447 aa12.85□□□□□ -0.35
COL6A1-207ENST00000612273 FHL1Q13642 323 aa12.85□□□□□ -0.35
COL6A1-207ENST00000612273 GAS6Q14393 721 aa12.85□□□□□ -0.35
COL6A1-207ENST00000612273 ALG11Q2TAA5 492 aa12.85□□□□□ -0.35
COL6A1-207ENST00000612273 ZNF613Q6PF04 617 aa12.85□□□□□ -0.35
COL6A1-207ENST00000612273 C11orf88Q6PI97 169 aa12.85□□□□□ -0.35
COL6A1-207ENST00000612273 MAMSTRQ6ZN01 415 aa12.85□□□□□ -0.35
COL6A1-207ENST00000612273 Q6ZSR6 202 aa12.85□□□□□ -0.35
COL6A1-207ENST00000612273 ZNF676Q8N7Q3 588 aa12.85□□□□□ -0.35
COL6A1-207ENST00000612273 FLVCR1-AS1Q8TAF5 88 aa12.85□□□□□ -0.35
COL6A1-207ENST00000612273 FCAMRQ8WWV6 532 aa12.85□□□□□ -0.35
COL6A1-207ENST00000612273 CPNE7Q9UBL6 633 aa12.85□□□□□ -0.35
COL6A1-207ENST00000612273 CHRNA9Q9UGM1 479 aa12.85□□□□□ -0.35
COL6A1-207ENST00000612273 UBQLN2Q9UHD9 624 aa12.85□□□□□ -0.35
COL6A1-207ENST00000612273 V9GY05 133 aa12.85□□□□□ -0.35
COL6A1-207ENST00000612273 ZNF879B4DU55 563 aa12.85□□□□□ -0.35
COL6A1-207ENST00000612273 LGALS8O00214 317 aa12.85□□□□□ -0.35
COL6A1-207ENST00000612273 OIP5O43482 229 aa12.85□□□□□ -0.35
COL6A1-207ENST00000612273 GALR3O60755 368 aaPredicted RBP12.85□□□□□ -0.35
COL6A1-207ENST00000612273 KRT33AO76009 404 aa12.85□□□□□ -0.35
COL6A1-207ENST00000612273 APBB3O95704 486 aa12.85□□□□□ -0.35
COL6A1-207ENST00000612273 EGFP01133 1207 aa12.85□□□□□ -0.35
COL6A1-207ENST00000612273 ITPKBP27987 946 aa12.85□□□□□ -0.35
COL6A1-207ENST00000612273 KIR2DL1P43626 348 aaPredicted RBP12.85□□□□□ -0.35
COL6A1-207ENST00000612273 KIR2DS3Q14952 304 aa12.85□□□□□ -0.35
COL6A1-207ENST00000612273 RPL13AP3Q6NVV1 102 aa12.85□□□□□ -0.35
COL6A1-207ENST00000612273 FAM199XQ6PEV8 388 aaPredicted RBP12.85□□□□□ -0.35
COL6A1-207ENST00000612273 NPEPL1Q8NDH3 523 aa12.85□□□□□ -0.35
COL6A1-207ENST00000612273 OR4D10Q8NGI6 311 aa12.85□□□□□ -0.35
COL6A1-207ENST00000612273 SLC37A2Q8TED4 501 aa12.85□□□□□ -0.35
COL6A1-207ENST00000612273 ZDHHC1Q8WTX9 485 aa12.85□□□□□ -0.35
COL6A1-207ENST00000612273 RGP1Q92546 391 aaPredicted RBP12.85□□□□□ -0.35
COL6A1-207ENST00000612273 SLC25A36Q96CQ1 311 aa12.85□□□□□ -0.35
COL6A1-207ENST00000612273 SFXN2Q96NB2 322 aa12.85□□□□□ -0.35
COL6A1-207ENST00000612273 MICU1Q9BPX6 476 aa12.85□□□□□ -0.35
COL6A1-207ENST00000612273 ANKRD10Q9NXR5 420 aa12.85□□□□□ -0.35
COL6A1-207ENST00000612273 ABRACLQ9P1F3 81 aa12.85□□□□□ -0.35
COL6A1-207ENST00000612273 OR5V1Q9UGF6 321 aa12.85□□□□□ -0.35
COL6A1-207ENST00000612273 SCML1Q9UN30 329 aa12.85□□□□□ -0.35
COL6A1-207ENST00000612273 ELOA3DA6NLF2 546 aaPredicted RBP12.84□□□□□ -0.35
COL6A1-207ENST00000612273 OR7A10O76100 309 aa12.84□□□□□ -0.35
COL6A1-207ENST00000612273 LGALS3BPQ08380 585 aa12.84□□□□□ -0.35
COL6A1-207ENST00000612273 ELOA3BQ3SY89 546 aa12.84□□□□□ -0.35
COL6A1-207ENST00000612273 C1orf53Q5VUE5 145 aa12.84□□□□□ -0.35
COL6A1-207ENST00000612273 ULK3Q6PHR2 472 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms