RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 TIGD6Q17RP2 521 aa7.96□□□□□ -1.13
SMAD4-217ENST00000611848 C1QL3Q5VWW1 255 aa7.96□□□□□ -1.13
SMAD4-217ENST00000611848 MEDAGQ5VYS4 303 aa7.96□□□□□ -1.13
SMAD4-217ENST00000611848 RNLSQ5VYX0 342 aa7.96□□□□□ -1.13
SMAD4-217ENST00000611848 VASNQ6EMK4 673 aa7.96□□□□□ -1.13
SMAD4-217ENST00000611848 MTFR2Q6P444 385 aa7.96□□□□□ -1.13
SMAD4-217ENST00000611848 CLEC18BQ6UXF7 455 aa7.96□□□□□ -1.13
SMAD4-217ENST00000611848 ZNF367Q7RTV3 350 aa7.96□□□□□ -1.13
SMAD4-217ENST00000611848 HMGN2P46Q86SG4 172 aa7.96□□□□□ -1.13
SMAD4-217ENST00000611848 CD163Q86VB7 1156 aa7.96□□□□□ -1.13
SMAD4-217ENST00000611848 VRK2Q86Y07 508 aa7.96□□□□□ -1.13
SMAD4-217ENST00000611848 DOLPP1Q86YN1 238 aa7.96□□□□□ -1.13
SMAD4-217ENST00000611848 CMIPQ8IY22 773 aa7.96□□□□□ -1.13
SMAD4-217ENST00000611848 PEX5LQ8IYB4 626 aa7.96□□□□□ -1.13
SMAD4-217ENST00000611848 CLEC18CQ8NCF0 446 aa7.96□□□□□ -1.13
SMAD4-217ENST00000611848 TOR1AIP2Q8NFQ8 470 aa7.96□□□□□ -1.13
SMAD4-217ENST00000611848 OR52P1PQ8NH57 321 aa7.96□□□□□ -1.13
SMAD4-217ENST00000611848 NDNFQ8TB73 568 aa7.96□□□□□ -1.13
SMAD4-217ENST00000611848 FNDC8Q8TC99 324 aa7.96□□□□□ -1.13
SMAD4-217ENST00000611848 ABTB1Q969K4 478 aaPredicted RBP7.96□□□□□ -1.13
SMAD4-217ENST00000611848 SH3YL1Q96HL8 342 aaPredicted RBP7.96□□□□□ -1.13
SMAD4-217ENST00000611848 SFXN2Q96NB2 322 aa7.96□□□□□ -1.13
SMAD4-217ENST00000611848 DACH2Q96NX9 599 aa7.96□□□□□ -1.13
SMAD4-217ENST00000611848 TIMP4Q99727 224 aa7.96□□□□□ -1.13
SMAD4-217ENST00000611848 GPA33Q99795 319 aa7.96□□□□□ -1.13
SMAD4-217ENST00000611848 PIGQQ9BRB3 760 aa7.96□□□□□ -1.13
SMAD4-217ENST00000611848 LAT2Q9GZY6 243 aa7.96□□□□□ -1.13
SMAD4-217ENST00000611848 QRSL1Q9H0R6 528 aaKnown RBP7.96□□□□□ -1.13
SMAD4-217ENST00000611848 SPRR3Q9UBC9 169 aa7.96□□□□□ -1.13
SMAD4-217ENST00000611848 KCNE5Q9UJ90 142 aa7.96□□□□□ -1.13
SMAD4-217ENST00000611848 TINAGQ9UJW2 476 aa7.96□□□□□ -1.13
SMAD4-217ENST00000611848 SLC6A5Q9Y345 797 aa7.96□□□□□ -1.13
SMAD4-217ENST00000611848 NCOA6Q14686 2063 aaPredicted RBP7.96□□□□□ -1.14
SMAD4-217ENST00000611848 ICE1Q9Y2F5 2266 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 DOPEY1Q5JWR5 2465 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 A0A087WUU8 490 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 AGAP5A6NIR3 686 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 E9PLN8 166 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 H3BN98 237 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 M0R3G1 203 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 CCL21O00585 134 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 ZNHIT1O43257 154 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 WDR1O75083 606 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 ENTPD6O75354 484 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 AGFG2O95081 481 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 SOX14O95416 240 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 CSTAP01040 98 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 PTHP01270 115 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 DBIP07108 87 aaKnown RBP7.96□□□□□ -1.14
SMAD4-217ENST00000611848 THBS1P07996 1170 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 ADRA2AP08913 450 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 UBL4AP11441 157 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 GABRA1P14867 456 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 BMP7P18075 431 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 RPS4Y1P22090 263 aaKnown RBP7.96□□□□□ -1.14
SMAD4-217ENST00000611848 PTGER4P35408 488 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 IFNGR2P38484 337 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 GIPRP48546 466 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 ZNF41P51814 821 aaPredicted RBP7.96□□□□□ -1.14
SMAD4-217ENST00000611848 GFRA1P56159 465 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 VBP1P61758 197 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 NCS1P62166 190 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 TUBA1BP68363 451 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 ZNF117Q03924 483 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 FOXD4Q12950 439 aaPredicted RBP7.96□□□□□ -1.14
SMAD4-217ENST00000611848 TRAM2Q15035 370 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 SF3B4Q15427 424 aaKnown RBP eCLIP7.96□□□□□ -1.14
SMAD4-217ENST00000611848 MAPK14Q16539 360 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 DGUOKQ16854 277 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 ZSWIM7Q19AV6 140 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 TMEM211Q6ICI0 200 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 CBLN3Q6UW01 205 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 CASP12Q6UXS9 341 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 TUBA1AQ71U36 451 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 FJX1Q86VR8 437 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 PM20D2Q8IYS1 436 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 OR5W2Q8NH69 310 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 GNPDA2Q8TDQ7 276 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 ZBTB8AQ96BR9 441 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 ARSGQ96EG1 525 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 PLEKHA8Q96JA3 519 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 VKORC1Q9BQB6 163 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 POLDIP3Q9BY77 421 aaKnown RBP7.96□□□□□ -1.14
SMAD4-217ENST00000611848 PRDM14Q9GZV8 571 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 CACYBPQ9HB71 228 aaKnown RBP7.96□□□□□ -1.14
SMAD4-217ENST00000611848 TBC1D23Q9NUY8 699 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 KLHL28Q9NXS3 571 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 SH3BGRL2Q9UJC5 107 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 ERRFI1Q9UJM3 462 aaPredicted RBP7.96□□□□□ -1.14
SMAD4-217ENST00000611848 OSGIN1Q9UJX0 560 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 SLC13A4Q9UKG4 626 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.96□□□□□ -1.14
SMAD4-217ENST00000611848 ICAM5Q9UMF0 924 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 ZNF443Q9Y2A4 671 aaPredicted RBP7.96□□□□□ -1.14
SMAD4-217ENST00000611848 CARD8Q9Y2G2 431 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 RPH3AQ9Y2J0 694 aaPredicted RBP7.96□□□□□ -1.14
SMAD4-217ENST00000611848 PMF1-BGLAPU3KQ54 211 aa7.96□□□□□ -1.14
SMAD4-217ENST00000611848 CENPVL1A0A0U1RR11 272 aa7.95□□□□□ -1.14
SMAD4-217ENST00000611848 OR2M5A3KFT3 312 aa7.95□□□□□ -1.14
SMAD4-217ENST00000611848 EFCAB9A8MZ26 197 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms