RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 GPRIN2O60269 458 aa16.91■□□□□ 0.3
SGMS1-208ENST00000608287 CCDC22O60826 627 aa16.91■□□□□ 0.3
SGMS1-208ENST00000608287 AHSA1O95433 338 aa16.91■□□□□ 0.3
SGMS1-208ENST00000608287 IL32P24001 234 aa16.91■□□□□ 0.3
SGMS1-208ENST00000608287 GZMMP51124 257 aa16.91■□□□□ 0.3
SGMS1-208ENST00000608287 SLC16A1P53985 500 aa16.91■□□□□ 0.3
SGMS1-208ENST00000608287 SEC24CP53992 1094 aa16.91■□□□□ 0.3
SGMS1-208ENST00000608287 FAPQ12884 760 aa16.91■□□□□ 0.3
SGMS1-208ENST00000608287 VMACQ2NL98 169 aa16.91■□□□□ 0.3
SGMS1-208ENST00000608287 ALG10BQ5I7T1 473 aa16.91■□□□□ 0.3
SGMS1-208ENST00000608287 NCMAPQ5T1S8 102 aa16.91■□□□□ 0.3
SGMS1-208ENST00000608287 SFRP5Q5T4F7 317 aa16.91■□□□□ 0.3
SGMS1-208ENST00000608287 Q6ZT83 130 aa16.91■□□□□ 0.3
SGMS1-208ENST00000608287 SPATA21Q7Z572 469 aa16.91■□□□□ 0.3
SGMS1-208ENST00000608287 POU5F2Q8N7G0 328 aa16.91■□□□□ 0.3
SGMS1-208ENST00000608287 TMEM99Q8N816 258 aa16.91■□□□□ 0.3
SGMS1-208ENST00000608287 SLC26A7Q8TE54 656 aa16.91■□□□□ 0.3
SGMS1-208ENST00000608287 DNAJA4Q8WW22 397 aaPredicted RBP16.91■□□□□ 0.3
SGMS1-208ENST00000608287 S100PBPQ96BU1 408 aa16.91■□□□□ 0.3
SGMS1-208ENST00000608287 FAM107BQ9H098 131 aa16.91■□□□□ 0.3
SGMS1-208ENST00000608287 TMEM27Q9HBJ8 222 aa16.91■□□□□ 0.3
SGMS1-208ENST00000608287 SELENONQ9NZV5 590 aa16.91■□□□□ 0.3
SGMS1-208ENST00000608287 SSX4O60224 188 aa16.9■□□□□ 0.3
SGMS1-208ENST00000608287 LMX1BO60663 402 aa16.9■□□□□ 0.3
SGMS1-208ENST00000608287 MRPL33O75394 65 aaKnown RBP16.9■□□□□ 0.3
SGMS1-208ENST00000608287 IGHV3-9P01782 118 aa16.9■□□□□ 0.3
SGMS1-208ENST00000608287 ITGADQ13349 1161 aa16.9■□□□□ 0.3
SGMS1-208ENST00000608287 P2RY6Q15077 328 aa16.9■□□□□ 0.3
SGMS1-208ENST00000608287 DUSP7Q16829 419 aa16.9■□□□□ 0.3
SGMS1-208ENST00000608287 ALKBH2Q6NS38 261 aa16.9■□□□□ 0.3
SGMS1-208ENST00000608287 RANBP3LQ86VV4 465 aaPredicted RBP16.9■□□□□ 0.3
SGMS1-208ENST00000608287 UBE2J2Q8N2K1 259 aa16.9■□□□□ 0.3
SGMS1-208ENST00000608287 OR10H5Q8NGA6 315 aa16.9■□□□□ 0.3
SGMS1-208ENST00000608287 RP9Q8TA86 221 aaKnown RBP16.9■□□□□ 0.3
SGMS1-208ENST00000608287 KISS1RQ969F8 398 aaPredicted RBP16.9■□□□□ 0.3
SGMS1-208ENST00000608287 APH1AQ96BI3 265 aa16.9■□□□□ 0.3
SGMS1-208ENST00000608287 RCN3Q96D15 328 aa16.9■□□□□ 0.3
SGMS1-208ENST00000608287 WFDC6Q9BQY6 131 aa16.9■□□□□ 0.3
SGMS1-208ENST00000608287 TRAF4Q9BUZ4 470 aaPredicted RBP16.9■□□□□ 0.3
SGMS1-208ENST00000608287 EVA1AQ9H8M9 152 aa16.9■□□□□ 0.3
SGMS1-208ENST00000608287 C12orf10Q9HB07 376 aa16.9■□□□□ 0.3
SGMS1-208ENST00000608287 KCNS2Q9ULS6 477 aa16.9■□□□□ 0.3
SGMS1-208ENST00000608287 IGHV4-30-2A0A087WSY4 118 aa16.89■□□□□ 0.29
SGMS1-208ENST00000608287 M0R3H8 397 aa16.89■□□□□ 0.29
SGMS1-208ENST00000608287 NPIPB7O75200 414 aa16.89■□□□□ 0.29
SGMS1-208ENST00000608287 LYZL6O75951 148 aa16.89■□□□□ 0.29
SGMS1-208ENST00000608287 LGI1O95970 557 aa16.89■□□□□ 0.29
SGMS1-208ENST00000608287 PNMTP11086 282 aa16.89■□□□□ 0.29
SGMS1-208ENST00000608287 RPS5P46782 204 aaKnown RBP16.89■□□□□ 0.29
SGMS1-208ENST00000608287 EGR4Q05215 589 aa16.89■□□□□ 0.29
SGMS1-208ENST00000608287 SLC17A1Q14916 467 aa16.89■□□□□ 0.29
SGMS1-208ENST00000608287 OR1Q1Q15612 314 aa16.89■□□□□ 0.29
SGMS1-208ENST00000608287 FAM91A1Q658Y4 838 aa16.89■□□□□ 0.29
SGMS1-208ENST00000608287 TMEM225Q6GV28 225 aa16.89■□□□□ 0.29
SGMS1-208ENST00000608287 ULK3Q6PHR2 472 aa16.89■□□□□ 0.29
SGMS1-208ENST00000608287 C6orf89Q6UWU4 347 aa16.89■□□□□ 0.29
SGMS1-208ENST00000608287 CASP12Q6UXS9 341 aa16.89■□□□□ 0.29
SGMS1-208ENST00000608287 BHLHA15Q7RTS1 189 aaPredicted RBP16.89■□□□□ 0.29
SGMS1-208ENST00000608287 SSX8Q7RTT4 187 aa16.89■□□□□ 0.29
SGMS1-208ENST00000608287 GPAT4Q86UL3 456 aa16.89■□□□□ 0.29
SGMS1-208ENST00000608287 CALHM3Q86XJ0 350 aa16.89■□□□□ 0.29
SGMS1-208ENST00000608287 GPR32P1Q8NGA4 272 aa16.89■□□□□ 0.29
SGMS1-208ENST00000608287 HSD17B8Q92506 261 aa16.89■□□□□ 0.29
SGMS1-208ENST00000608287 TAMM41Q96BW9 452 aa16.89■□□□□ 0.29
SGMS1-208ENST00000608287 SLC25A36Q96CQ1 311 aa16.89■□□□□ 0.29
SGMS1-208ENST00000608287 ZMYND19Q96E35 227 aaPredicted RBP16.89■□□□□ 0.29
SGMS1-208ENST00000608287 KTI12Q96EK9 354 aaPredicted RBP16.89■□□□□ 0.29
SGMS1-208ENST00000608287 SLC47A1Q96FL8 570 aa16.89■□□□□ 0.29
SGMS1-208ENST00000608287 ARHGDIGQ99819 225 aa16.89■□□□□ 0.29
SGMS1-208ENST00000608287 NSRP1Q9H0G5 558 aaKnown RBP16.89■□□□□ 0.29
SGMS1-208ENST00000608287 SLC9A8Q9Y2E8 581 aa16.89■□□□□ 0.29
SGMS1-208ENST00000608287 FLVCR1Q9Y5Y0 555 aa16.89■□□□□ 0.29
SGMS1-208ENST00000608287 AQP7P3A6NL99 342 aa16.88■□□□□ 0.29
SGMS1-208ENST00000608287 CSF3P09919 207 aa16.88■□□□□ 0.29
SGMS1-208ENST00000608287 COX4I1P13073 169 aa16.88■□□□□ 0.29
SGMS1-208ENST00000608287 GTF2E2P29084 291 aaKnown RBP16.88■□□□□ 0.29
SGMS1-208ENST00000608287 NTF4P34130 210 aa16.88■□□□□ 0.29
SGMS1-208ENST00000608287 GZMKP49863 264 aa16.88■□□□□ 0.29
SGMS1-208ENST00000608287 GYS2P54840 703 aa16.88■□□□□ 0.29
SGMS1-208ENST00000608287 AGAP6Q5VW22 663 aa16.88■□□□□ 0.29
SGMS1-208ENST00000608287 FBXW9Q5XUX1 488 aa16.88■□□□□ 0.29
SGMS1-208ENST00000608287 DTX2Q86UW9 622 aa16.88■□□□□ 0.29
SGMS1-208ENST00000608287 LILRB1Q8NHL6 650 aaPredicted RBP16.88■□□□□ 0.29
SGMS1-208ENST00000608287 MFSD8Q8NHS3 518 aa16.88■□□□□ 0.29
SGMS1-208ENST00000608287 VANGL1Q8TAA9 524 aaPredicted RBP16.88■□□□□ 0.29
SGMS1-208ENST00000608287 MCHR1Q99705 422 aa16.88■□□□□ 0.29
SGMS1-208ENST00000608287 PARPBPQ9NWS1 579 aa16.88■□□□□ 0.29
SGMS1-208ENST00000608287 USP22Q9UPT9 525 aa16.88■□□□□ 0.29
SGMS1-208ENST00000608287 A0A096LNT2 108 aa16.87■□□□□ 0.29
SGMS1-208ENST00000608287 AIM2O14862 343 aa16.87■□□□□ 0.29
SGMS1-208ENST00000608287 TPST2O60704 377 aa16.87■□□□□ 0.29
SGMS1-208ENST00000608287 CD247P20963 164 aa16.87■□□□□ 0.29
SGMS1-208ENST00000608287 IGHV1-2P23083 117 aa16.87■□□□□ 0.29
SGMS1-208ENST00000608287 LSP1P33241 339 aa16.87■□□□□ 0.29
SGMS1-208ENST00000608287 PGGHGQ32M88 737 aa16.87■□□□□ 0.29
SGMS1-208ENST00000608287 FAM166AQ6J272 317 aa16.87■□□□□ 0.29
SGMS1-208ENST00000608287 ERICH5Q6P6B1 374 aa16.87■□□□□ 0.29
SGMS1-208ENST00000608287 C5orf46Q6UWT4 87 aa16.87■□□□□ 0.29
SGMS1-208ENST00000608287 C12orf54Q6X4T0 127 aa16.87■□□□□ 0.29
SGMS1-208ENST00000608287 CCDC80Q76M96 950 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms