RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 HSDL2Q6YN16 418 aa2.45□□□□□ -2.02
RNU6-88P-201ENST00000606801 ARL6IP6Q8N6S5 226 aa2.45□□□□□ -2.02
RNU6-88P-201ENST00000606801 ARIH2OSQ8N7S6 290 aa2.45□□□□□ -2.02
RNU6-88P-201ENST00000606801 OR8J1Q8NGP2 316 aa2.45□□□□□ -2.02
RNU6-88P-201ENST00000606801 FGF14Q92915 247 aa2.45□□□□□ -2.02
RNU6-88P-201ENST00000606801 C10orf35Q96D05 121 aa2.45□□□□□ -2.02
RNU6-88P-201ENST00000606801 RBM14Q96PK6 669 aaKnown RBP2.45□□□□□ -2.02
RNU6-88P-201ENST00000606801 NPY6RQ99463 290 aa2.45□□□□□ -2.02
RNU6-88P-201ENST00000606801 TMEM246Q9BRR3 403 aa2.45□□□□□ -2.02
RNU6-88P-201ENST00000606801 DEFB127Q9H1M4 99 aa2.45□□□□□ -2.02
RNU6-88P-201ENST00000606801 AZI2Q9H6S1 392 aa2.45□□□□□ -2.02
RNU6-88P-201ENST00000606801 NHEJ1Q9H9Q4 299 aaPredicted RBP2.45□□□□□ -2.02
RNU6-88P-201ENST00000606801 LY9Q9HBG7 655 aa2.45□□□□□ -2.02
RNU6-88P-201ENST00000606801 MCCC2Q9HCC0 563 aa2.45□□□□□ -2.02
RNU6-88P-201ENST00000606801 QPCTLQ9NXS2 382 aa2.45□□□□□ -2.02
RNU6-88P-201ENST00000606801 TMCC3Q9ULS5 477 aa2.45□□□□□ -2.02
RNU6-88P-201ENST00000606801 IQANK1A0A1B0GTG1 560 aa2.44□□□□□ -2.02
RNU6-88P-201ENST00000606801 SNTNA6NMZ2 147 aa2.44□□□□□ -2.02
RNU6-88P-201ENST00000606801 A8MXQ7 604 aa2.44□□□□□ -2.02
RNU6-88P-201ENST00000606801 TRIM49D1C9J1S8 452 aa2.44□□□□□ -2.02
RNU6-88P-201ENST00000606801 C12orf77C9JDV5 145 aa2.44□□□□□ -2.02
RNU6-88P-201ENST00000606801 POLR2DO15514 142 aaKnown RBP2.44□□□□□ -2.02
RNU6-88P-201ENST00000606801 MED7O43513 233 aa2.44□□□□□ -2.02
RNU6-88P-201ENST00000606801 SCGNO76038 276 aa2.44□□□□□ -2.02
RNU6-88P-201ENST00000606801 PRB2P02812 416 aaPredicted RBP2.44□□□□□ -2.02
RNU6-88P-201ENST00000606801 PCCAP05165 728 aaPredicted RBP2.44□□□□□ -2.02
RNU6-88P-201ENST00000606801 TDGF1P13385 188 aa2.44□□□□□ -2.02
RNU6-88P-201ENST00000606801 CRISP2P16562 243 aa2.44□□□□□ -2.02
RNU6-88P-201ENST00000606801 FMO3P31513 532 aa2.44□□□□□ -2.02
RNU6-88P-201ENST00000606801 GLP1RP43220 463 aa2.44□□□□□ -2.02
RNU6-88P-201ENST00000606801 TDGF1P3P51864 188 aa2.44□□□□□ -2.02
RNU6-88P-201ENST00000606801 UCNP55089 124 aa2.44□□□□□ -2.02
RNU6-88P-201ENST00000606801 PDIA2Q13087 525 aaKnown RBP2.44□□□□□ -2.02
RNU6-88P-201ENST00000606801 OR5I1Q13606 314 aa2.44□□□□□ -2.02
RNU6-88P-201ENST00000606801 BOLA3Q53S33 107 aa2.44□□□□□ -2.02
RNU6-88P-201ENST00000606801 CENPPQ6IPU0 288 aa2.44□□□□□ -2.02
RNU6-88P-201ENST00000606801 PMF1Q6P1K2 205 aa2.44□□□□□ -2.02
RNU6-88P-201ENST00000606801 ZNF621Q6ZSS3 439 aa2.44□□□□□ -2.02
RNU6-88P-201ENST00000606801 Q8N9L7 120 aa2.44□□□□□ -2.02
RNU6-88P-201ENST00000606801 EIF1ADQ8N9N8 165 aaKnown RBP2.44□□□□□ -2.02
RNU6-88P-201ENST00000606801 BLOC1S5Q8TDH9 187 aa2.44□□□□□ -2.02
RNU6-88P-201ENST00000606801 ACOT11Q8WXI4 607 aaPredicted RBP2.44□□□□□ -2.02
RNU6-88P-201ENST00000606801 CLCC1Q96S66 551 aa2.44□□□□□ -2.02
RNU6-88P-201ENST00000606801 RIOK2Q9BVS4 552 aaKnown RBP2.44□□□□□ -2.02
RNU6-88P-201ENST00000606801 KRTAP4-3Q9BYR4 195 aa2.44□□□□□ -2.02
RNU6-88P-201ENST00000606801 TRAPPC4Q9Y296 219 aa2.44□□□□□ -2.02
RNU6-88P-201ENST00000606801 NUP214P35658 2090 aaPredicted RBP2.44□□□□□ -2.02
RNU6-88P-201ENST00000606801 PCM1Q15154 2024 aa2.44□□□□□ -2.02
RNU6-88P-201ENST00000606801 TRBV6-6A0A0A6YYG2 114 aa2.43□□□□□ -2.02
RNU6-88P-201ENST00000606801 A6NDX4 124 aa2.43□□□□□ -2.02
RNU6-88P-201ENST00000606801 OR5B21A6NL26 309 aa2.43□□□□□ -2.02
RNU6-88P-201ENST00000606801 CXCL11O14625 94 aa2.43□□□□□ -2.02
RNU6-88P-201ENST00000606801 TIMM8AO60220 97 aaPredicted RBP2.43□□□□□ -2.02
RNU6-88P-201ENST00000606801 FCMRO60667 390 aa2.43□□□□□ -2.02
RNU6-88P-201ENST00000606801 CA11O75493 328 aa2.43□□□□□ -2.02
RNU6-88P-201ENST00000606801 KLF8O95600 359 aaPredicted RBP2.43□□□□□ -2.02
RNU6-88P-201ENST00000606801 MMP1P03956 469 aa2.43□□□□□ -2.02
RNU6-88P-201ENST00000606801 GAPDHP04406 335 aaKnown RBP2.43□□□□□ -2.02
RNU6-88P-201ENST00000606801 TBPP20226 339 aa2.43□□□□□ -2.02
RNU6-88P-201ENST00000606801 CCNCP24863 283 aa2.43□□□□□ -2.02
RNU6-88P-201ENST00000606801 RDXP35241 583 aaKnown RBP2.43□□□□□ -2.02
RNU6-88P-201ENST00000606801 CCR6P51684 374 aa2.43□□□□□ -2.02
RNU6-88P-201ENST00000606801 KIAA0087Q14695 138 aa2.43□□□□□ -2.02
RNU6-88P-201ENST00000606801 PSG5Q15238 335 aa2.43□□□□□ -2.02
RNU6-88P-201ENST00000606801 RSPO1Q2MKA7 263 aaPredicted RBP2.43□□□□□ -2.02
RNU6-88P-201ENST00000606801 KLHL38Q2WGJ6 581 aa2.43□□□□□ -2.02
RNU6-88P-201ENST00000606801 CASC1Q6TDU7 716 aa2.43□□□□□ -2.02
RNU6-88P-201ENST00000606801 ENPP6Q6UWR7 440 aa2.43□□□□□ -2.02
RNU6-88P-201ENST00000606801 C6orf89Q6UWU4 347 aa2.43□□□□□ -2.02
RNU6-88P-201ENST00000606801 Q6ZN92 141 aa2.43□□□□□ -2.02
RNU6-88P-201ENST00000606801 ZNF546Q86UE3 836 aa2.43□□□□□ -2.02
RNU6-88P-201ENST00000606801 ZNF429Q86V71 674 aa2.43□□□□□ -2.02
RNU6-88P-201ENST00000606801 THOC6Q86W42 341 aaKnown RBP2.43□□□□□ -2.02
RNU6-88P-201ENST00000606801 Q8N9W7 124 aa2.43□□□□□ -2.02
RNU6-88P-201ENST00000606801 MDS2Q8NDY4 140 aa2.43□□□□□ -2.02
RNU6-88P-201ENST00000606801 OR1L4Q8NGR5 311 aa2.43□□□□□ -2.02
RNU6-88P-201ENST00000606801 FANK1Q8TC84 345 aa2.43□□□□□ -2.02
RNU6-88P-201ENST00000606801 ACER1Q8TDN7 264 aa2.43□□□□□ -2.02
RNU6-88P-201ENST00000606801 TMEM158Q8WZ71 300 aa2.43□□□□□ -2.02
RNU6-88P-201ENST00000606801 CXorf40BQ96DE9 158 aa2.43□□□□□ -2.02
RNU6-88P-201ENST00000606801 C12orf42Q96LP6 360 aa2.43□□□□□ -2.02
RNU6-88P-201ENST00000606801 COPS8Q99627 209 aa2.43□□□□□ -2.02
RNU6-88P-201ENST00000606801 TRIM62Q9BVG3 475 aa2.43□□□□□ -2.02
RNU6-88P-201ENST00000606801 SLC25A39Q9BZJ4 359 aaPredicted RBP2.43□□□□□ -2.02
RNU6-88P-201ENST00000606801 NT5C3AQ9H0P0 336 aa2.43□□□□□ -2.02
RNU6-88P-201ENST00000606801 SRMSQ9H3Y6 488 aa2.43□□□□□ -2.02
RNU6-88P-201ENST00000606801 PLGRKTQ9HBL7 147 aa2.43□□□□□ -2.02
RNU6-88P-201ENST00000606801 GIN1Q9NXP7 522 aa2.43□□□□□ -2.02
RNU6-88P-201ENST00000606801 KCNIP3Q9Y2W7 256 aa2.43□□□□□ -2.02
RNU6-88P-201ENST00000606801 WSB1Q9Y6I7 421 aa2.43□□□□□ -2.02
RNU6-88P-201ENST00000606801 IGHV3-64DA0A0J9YX35 117 aa2.42□□□□□ -2.02
RNU6-88P-201ENST00000606801 A0A1B0GVL5 298 aa2.42□□□□□ -2.02
RNU6-88P-201ENST00000606801 A0A1W2PPE3 182 aa2.42□□□□□ -2.02
RNU6-88P-201ENST00000606801 A0A1W2PPV9 198 aa2.42□□□□□ -2.02
RNU6-88P-201ENST00000606801 TSPAN12O95859 305 aa2.42□□□□□ -2.02
RNU6-88P-201ENST00000606801 GIPP09681 153 aaPredicted RBP2.42□□□□□ -2.02
RNU6-88P-201ENST00000606801 DBTP11182 482 aaKnown RBP2.42□□□□□ -2.02
RNU6-88P-201ENST00000606801 IL12AP29459 219 aa2.42□□□□□ -2.02
RNU6-88P-201ENST00000606801 SH3BGRP55822 239 aaPredicted RBP2.42□□□□□ -2.02
RNU6-88P-201ENST00000606801 SEC61GP60059 68 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms