RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 YLPM1P49750 1951 aaKnown RBP11.45□□□□□ -0.58
RPS28-204ENST00000602140 ARPC4-TTLL3A0A0A6YYG9 625 aa11.44□□□□□ -0.58
RPS28-204ENST00000602140 B9A039 149 aa11.44□□□□□ -0.58
RPS28-204ENST00000602140 FTCDNL1E5RQL4 147 aa11.44□□□□□ -0.58
RPS28-204ENST00000602140 NDUFS8O00217 210 aa11.44□□□□□ -0.58
RPS28-204ENST00000602140 NUDT7P0C024 238 aa11.44□□□□□ -0.58
RPS28-204ENST00000602140 OR4A8P0C604 315 aa11.44□□□□□ -0.58
RPS28-204ENST00000602140 CECR9P0C854 216 aa11.44□□□□□ -0.58
RPS28-204ENST00000602140 GTF2E2P29084 291 aaKnown RBP11.44□□□□□ -0.58
RPS28-204ENST00000602140 CALCRP30988 508 aa11.44□□□□□ -0.58
RPS28-204ENST00000602140 POLR2JP52435 117 aaKnown RBP11.44□□□□□ -0.58
RPS28-204ENST00000602140 CLDN17P56750 224 aa11.44□□□□□ -0.58
RPS28-204ENST00000602140 ROR2Q01974 943 aaKnown RBP11.44□□□□□ -0.58
RPS28-204ENST00000602140 EGR4Q05215 589 aa11.44□□□□□ -0.58
RPS28-204ENST00000602140 ADIPOQQ15848 244 aa11.44□□□□□ -0.58
RPS28-204ENST00000602140 MSANTD1Q6ZTZ1 278 aa11.44□□□□□ -0.58
RPS28-204ENST00000602140 MAVSQ7Z434 540 aa11.44□□□□□ -0.58
RPS28-204ENST00000602140 OR9I1Q8NGQ6 314 aa11.44□□□□□ -0.58
RPS28-204ENST00000602140 MAGEE2Q8TD90 523 aaPredicted RBP11.44□□□□□ -0.58
RPS28-204ENST00000602140 MAL2Q969L2 176 aa11.44□□□□□ -0.58
RPS28-204ENST00000602140 KTI12Q96EK9 354 aaPredicted RBP11.44□□□□□ -0.58
RPS28-204ENST00000602140 ZNF317Q96PQ6 595 aaPredicted RBP11.44□□□□□ -0.58
RPS28-204ENST00000602140 OR52B2Q96RD2 323 aa11.44□□□□□ -0.58
RPS28-204ENST00000602140 PTDSS2Q9BVG9 487 aa11.44□□□□□ -0.58
RPS28-204ENST00000602140 PRR14Q9BWN1 585 aa11.44□□□□□ -0.58
RPS28-204ENST00000602140 NELFAQ9H3P2 528 aa11.44□□□□□ -0.58
RPS28-204ENST00000602140 CHODLQ9H9P2 273 aa11.44□□□□□ -0.58
RPS28-204ENST00000602140 SEC61A2Q9H9S3 476 aa11.44□□□□□ -0.58
RPS28-204ENST00000602140 SDR39U1Q9NRG7 319 aaPredicted RBP11.44□□□□□ -0.58
RPS28-204ENST00000602140 CRNNQ9UBG3 495 aaPredicted RBP11.44□□□□□ -0.58
RPS28-204ENST00000602140 SEC14L4Q9UDX3 406 aa11.44□□□□□ -0.58
RPS28-204ENST00000602140 RAB21Q9UL25 225 aa11.44□□□□□ -0.58
RPS28-204ENST00000602140 KCNS2Q9ULS6 477 aa11.44□□□□□ -0.58
RPS28-204ENST00000602140 PCDHB14Q9Y5E9 798 aa11.44□□□□□ -0.58
RPS28-204ENST00000602140 SVEP1Q4LDE5 3571 aa11.43□□□□□ -0.58
RPS28-204ENST00000602140 IGHV4-61A0A0C4DH41 118 aa11.43□□□□□ -0.58
RPS28-204ENST00000602140 LOC100289279A0A1B0GTE1 492 aa11.43□□□□□ -0.58
RPS28-204ENST00000602140 LOC390937A0A1W2PQ73 354 aa11.43□□□□□ -0.58
RPS28-204ENST00000602140 SLC35F4A4IF30 521 aa11.43□□□□□ -0.58
RPS28-204ENST00000602140 UBDO15205 165 aa11.43□□□□□ -0.58
RPS28-204ENST00000602140 ZNF432O94892 652 aa11.43□□□□□ -0.58
RPS28-204ENST00000602140 IGLV1-44P01699 117 aa11.43□□□□□ -0.58
RPS28-204ENST00000602140 APEHP13798 732 aaKnown RBP11.43□□□□□ -0.58
RPS28-204ENST00000602140 HOXB1P14653 301 aaPredicted RBP11.43□□□□□ -0.58
RPS28-204ENST00000602140 ZNF43P17038 809 aa11.43□□□□□ -0.58
RPS28-204ENST00000602140 IGFBP5P24593 272 aa11.43□□□□□ -0.58
RPS28-204ENST00000602140 SH3BGRP55822 239 aaPredicted RBP11.43□□□□□ -0.58
RPS28-204ENST00000602140 ARF1P84077 181 aaKnown RBP11.43□□□□□ -0.58
RPS28-204ENST00000602140 RGNQ15493 299 aa11.43□□□□□ -0.58
RPS28-204ENST00000602140 C3orf36Q3SXR2 165 aa11.43□□□□□ -0.58
RPS28-204ENST00000602140 FAM166AQ6J272 317 aa11.43□□□□□ -0.58
RPS28-204ENST00000602140 IL17RELQ6ZVW7 336 aa11.43□□□□□ -0.58
RPS28-204ENST00000602140 GTF2H4Q92759 462 aa11.43□□□□□ -0.58
RPS28-204ENST00000602140 MSI2Q96DH6 328 aaKnown RBP11.43□□□□□ -0.58
RPS28-204ENST00000602140 OXGR1Q96P68 337 aa11.43□□□□□ -0.58
RPS28-204ENST00000602140 PAIP1Q9H074 479 aaKnown RBP11.43□□□□□ -0.58
RPS28-204ENST00000602140 BCL2L10Q9HD36 194 aa11.43□□□□□ -0.58
RPS28-204ENST00000602140 MYOZ1Q9NP98 299 aaPredicted RBP11.43□□□□□ -0.58
RPS28-204ENST00000602140 A4GALTQ9NPC4 353 aa11.43□□□□□ -0.58
RPS28-204ENST00000602140 B3GAT1Q9P2W7 334 aa11.43□□□□□ -0.58
RPS28-204ENST00000602140 RCE1Q9Y256 329 aa11.43□□□□□ -0.58
RPS28-204ENST00000602140 ARFGEF3Q5TH69 2177 aa11.43□□□□□ -0.58
RPS28-204ENST00000602140 CLIC1O00299 241 aa11.42□□□□□ -0.58
RPS28-204ENST00000602140 SLC43A1O75387 559 aa11.42□□□□□ -0.58
RPS28-204ENST00000602140 PDE5AO76074 875 aa11.42□□□□□ -0.58
RPS28-204ENST00000602140 IGKV3-15P01624 115 aa11.42□□□□□ -0.58
RPS28-204ENST00000602140 CELA3BP08861 270 aa11.42□□□□□ -0.58
RPS28-204ENST00000602140 C1DQ13901 141 aaKnown RBP11.42□□□□□ -0.58
RPS28-204ENST00000602140 EFNB3Q15768 340 aa11.42□□□□□ -0.58
RPS28-204ENST00000602140 KRTAP24-1Q3LI83 254 aa11.42□□□□□ -0.58
RPS28-204ENST00000602140 IQCCQ4KMZ1 466 aa11.42□□□□□ -0.58
RPS28-204ENST00000602140 SLC2A7Q6PXP3 512 aa11.42□□□□□ -0.58
RPS28-204ENST00000602140 MYPOPQ86VE0 399 aaPredicted RBP11.42□□□□□ -0.58
RPS28-204ENST00000602140 MIER2Q8N344 545 aa11.42□□□□□ -0.58
RPS28-204ENST00000602140 GPR137CQ8N3F9 429 aa11.42□□□□□ -0.58
RPS28-204ENST00000602140 FAM169BQ8N8A8 192 aa11.42□□□□□ -0.58
RPS28-204ENST00000602140 OR4F15Q8NGB8 312 aa11.42□□□□□ -0.58
RPS28-204ENST00000602140 BBS10Q8TAM1 723 aa11.42□□□□□ -0.58
RPS28-204ENST00000602140 TAAR8Q969N4 342 aa11.42□□□□□ -0.58
RPS28-204ENST00000602140 SLC35B4Q969S0 331 aa11.42□□□□□ -0.58
RPS28-204ENST00000602140 PLK3Q9H4B4 646 aa11.42□□□□□ -0.58
RPS28-204ENST00000602140 RAD21L1Q9H4I0 556 aa11.42□□□□□ -0.58
RPS28-204ENST00000602140 MOV10Q9HCE1 1003 aaKnown RBP11.42□□□□□ -0.58
RPS28-204ENST00000602140 RPS6KB2Q9UBS0 482 aa11.42□□□□□ -0.58
RPS28-204ENST00000602140 C5orf58C9J3I9 102 aa11.41□□□□□ -0.58
RPS28-204ENST00000602140 RPL36A-HNRNPH2H7BZ11 118 aa11.41□□□□□ -0.58
RPS28-204ENST00000602140 M0R082 166 aa11.41□□□□□ -0.58
RPS28-204ENST00000602140 AIM2O14862 343 aa11.41□□□□□ -0.58
RPS28-204ENST00000602140 BMP2P12643 396 aa11.41□□□□□ -0.58
RPS28-204ENST00000602140 CBR1P16152 277 aa11.41□□□□□ -0.58
RPS28-204ENST00000602140 SRD5A1P18405 259 aa11.41□□□□□ -0.58
RPS28-204ENST00000602140 CBLP22681 906 aa11.41□□□□□ -0.58
RPS28-204ENST00000602140 THBS4P35443 961 aa11.41□□□□□ -0.58
RPS28-204ENST00000602140 PPOXP50336 477 aa11.41□□□□□ -0.58
RPS28-204ENST00000602140 IDH3GP51553 393 aaPredicted RBP11.41□□□□□ -0.58
RPS28-204ENST00000602140 SLC18A1P54219 525 aa11.41□□□□□ -0.58
RPS28-204ENST00000602140 MAGOHP61326 146 aaKnown RBP11.41□□□□□ -0.58
RPS28-204ENST00000602140 IL1RL1Q01638 556 aa11.41□□□□□ -0.58
RPS28-204ENST00000602140 HGFACQ04756 655 aa11.41□□□□□ -0.58
RPS28-204ENST00000602140 FADDQ13158 208 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms