RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 NTN1O95631 604 aa10.4□□□□□ -0.74
ZNF548-211ENST00000600927 NUDT14O95848 222 aa10.4□□□□□ -0.74
ZNF548-211ENST00000600927 MT-ND2P03891 347 aa10.4□□□□□ -0.74
ZNF548-211ENST00000600927 ASAH2BP0C7U1 165 aa10.4□□□□□ -0.74
ZNF548-211ENST00000600927 CD46P15529 392 aa10.4□□□□□ -0.74
ZNF548-211ENST00000600927 MST1P26927 711 aa10.4□□□□□ -0.74
ZNF548-211ENST00000600927 EIF1P41567 113 aaKnown RBP10.4□□□□□ -0.74
ZNF548-211ENST00000600927 PMP22Q01453 160 aa10.4□□□□□ -0.74
ZNF548-211ENST00000600927 EGR4Q05215 589 aa10.4□□□□□ -0.74
ZNF548-211ENST00000600927 GLYR1Q49A26 553 aaPredicted RBP10.4□□□□□ -0.74
ZNF548-211ENST00000600927 EMC4Q5J8M3 183 aa10.4□□□□□ -0.74
ZNF548-211ENST00000600927 FAM69AQ5T7M9 428 aa10.4□□□□□ -0.74
ZNF548-211ENST00000600927 FOXB2Q5VYV0 432 aa10.4□□□□□ -0.74
ZNF548-211ENST00000600927 SLC22A10Q63ZE4 541 aa10.4□□□□□ -0.74
ZNF548-211ENST00000600927 DESI1Q6ICB0 168 aa10.4□□□□□ -0.74
ZNF548-211ENST00000600927 C16orf47Q6ZP98 133 aaPredicted RBP10.4□□□□□ -0.74
ZNF548-211ENST00000600927 AHSA2Q719I0 299 aa10.4□□□□□ -0.74
ZNF548-211ENST00000600927 SLC46A3Q7Z3Q1 461 aa10.4□□□□□ -0.74
ZNF548-211ENST00000600927 GALNTL5Q7Z4T8 443 aa10.4□□□□□ -0.74
ZNF548-211ENST00000600927 ADGRG3Q86Y34 549 aa10.4□□□□□ -0.74
ZNF548-211ENST00000600927 EGFL6Q8IUX8 553 aa10.4□□□□□ -0.74
ZNF548-211ENST00000600927 SIAH3Q8IW03 269 aa10.4□□□□□ -0.74
ZNF548-211ENST00000600927 FADS6Q8N9I5 356 aa10.4□□□□□ -0.74
ZNF548-211ENST00000600927 OR4Q3Q8NH05 313 aa10.4□□□□□ -0.74
ZNF548-211ENST00000600927 THAP3Q8WTV1 239 aaPredicted RBP10.4□□□□□ -0.74
ZNF548-211ENST00000600927 C5orf34Q96MH7 638 aa10.4□□□□□ -0.74
ZNF548-211ENST00000600927 JAM3Q9BX67 310 aa10.4□□□□□ -0.74
ZNF548-211ENST00000600927 POTEKPQ9BYX7 375 aa10.4□□□□□ -0.74
ZNF548-211ENST00000600927 CCDC90BQ9GZT6 254 aa10.4□□□□□ -0.74
ZNF548-211ENST00000600927 MCCC2Q9HCC0 563 aa10.4□□□□□ -0.74
ZNF548-211ENST00000600927 NRIP3Q9NQ35 241 aa10.4□□□□□ -0.74
ZNF548-211ENST00000600927 NANSQ9NR45 359 aa10.4□□□□□ -0.74
ZNF548-211ENST00000600927 HAO2Q9NYQ3 351 aa10.4□□□□□ -0.74
ZNF548-211ENST00000600927 KLRF1Q9NZS2 232 aa10.4□□□□□ -0.74
ZNF548-211ENST00000600927 PPP4R1LQ9P1A2 415 aa10.4□□□□□ -0.74
ZNF548-211ENST00000600927 WARS2Q9UGM6 360 aaKnown RBP10.4□□□□□ -0.74
ZNF548-211ENST00000600927 RSL24D1Q9UHA3 163 aaKnown RBP10.4□□□□□ -0.74
ZNF548-211ENST00000600927 DIMT1Q9UNQ2 313 aaKnown RBP10.4□□□□□ -0.74
ZNF548-211ENST00000600927 COMMD3-BMI1R4GMX3 469 aa10.4□□□□□ -0.74
ZNF548-211ENST00000600927 USP9YO00507 2555 aaPredicted RBP10.4□□□□□ -0.74
ZNF548-211ENST00000600927 DOPEY1Q5JWR5 2465 aa10.4□□□□□ -0.75
ZNF548-211ENST00000600927 TMED7-TICAM2A0A0A6YYA0 188 aa10.39□□□□□ -0.75
ZNF548-211ENST00000600927 WIPF3A6NGB9 483 aa10.39□□□□□ -0.75
ZNF548-211ENST00000600927 TRIM64BA6NI03 449 aa10.39□□□□□ -0.75
ZNF548-211ENST00000600927 RIIAD1A6NNX1 92 aa10.39□□□□□ -0.75
ZNF548-211ENST00000600927 FAM47E-STBD1D6RA91 191 aa10.39□□□□□ -0.75
ZNF548-211ENST00000600927 H3BSA7 217 aa10.39□□□□□ -0.75
ZNF548-211ENST00000600927 TXNDC12O95881 172 aa10.39□□□□□ -0.75
ZNF548-211ENST00000600927 CH25HO95992 272 aa10.39□□□□□ -0.75
ZNF548-211ENST00000600927 CRYABP02511 175 aaKnown RBP10.39□□□□□ -0.75
ZNF548-211ENST00000600927 HIST1H2ABP04908 130 aa10.39□□□□□ -0.75
ZNF548-211ENST00000600927 DBTP11182 482 aaKnown RBP10.39□□□□□ -0.75
ZNF548-211ENST00000600927 PRKCAP17252 672 aa10.39□□□□□ -0.75
ZNF548-211ENST00000600927 PAICSP22234 425 aaKnown RBP10.39□□□□□ -0.75
ZNF548-211ENST00000600927 HTR1FP30939 366 aa10.39□□□□□ -0.75
ZNF548-211ENST00000600927 SOX3P41225 446 aa10.39□□□□□ -0.75
ZNF548-211ENST00000600927 RNF144AP50876 292 aaPredicted RBP10.39□□□□□ -0.75
ZNF548-211ENST00000600927 OC90Q02509 493 aaPredicted RBP10.39□□□□□ -0.75
ZNF548-211ENST00000600927 ZNF91Q05481 1191 aa10.39□□□□□ -0.75
ZNF548-211ENST00000600927 NEDD8Q15843 81 aa10.39□□□□□ -0.75
ZNF548-211ENST00000600927 EIF2S3LQ2VIR3 472 aaKnown RBP10.39□□□□□ -0.75
ZNF548-211ENST00000600927 ZNF362Q5T0B9 420 aaPredicted RBP10.39□□□□□ -0.75
ZNF548-211ENST00000600927 GPR139Q6DWJ6 353 aa10.39□□□□□ -0.75
ZNF548-211ENST00000600927 HIST3H2AQ7L7L0 130 aa10.39□□□□□ -0.75
ZNF548-211ENST00000600927 MAMDC2Q7Z304 686 aaPredicted RBP10.39□□□□□ -0.75
ZNF548-211ENST00000600927 MDGA2Q7Z553 956 aa10.39□□□□□ -0.75
ZNF548-211ENST00000600927 ANKRD13BQ86YJ7 626 aa10.39□□□□□ -0.75
ZNF548-211ENST00000600927 TMEM156Q8N614 296 aa10.39□□□□□ -0.75
ZNF548-211ENST00000600927 IQCF1Q8N6M8 205 aa10.39□□□□□ -0.75
ZNF548-211ENST00000600927 PROKR2Q8NFJ6 384 aa10.39□□□□□ -0.75
ZNF548-211ENST00000600927 OR10G3Q8NGC4 313 aa10.39□□□□□ -0.75
ZNF548-211ENST00000600927 OR13C2Q8NGS9 318 aa10.39□□□□□ -0.75
ZNF548-211ENST00000600927 RAB2BQ8WUD1 216 aa10.39□□□□□ -0.75
ZNF548-211ENST00000600927 HIST1H2ACQ93077 130 aa10.39□□□□□ -0.75
ZNF548-211ENST00000600927 SH3YL1Q96HL8 342 aaPredicted RBP10.39□□□□□ -0.75
ZNF548-211ENST00000600927 TMEM41AQ96HV5 264 aa10.39□□□□□ -0.75
ZNF548-211ENST00000600927 IFT27Q9BW83 186 aa10.39□□□□□ -0.75
ZNF548-211ENST00000600927 ISYNA1Q9NPH2 558 aa10.39□□□□□ -0.75
ZNF548-211ENST00000600927 KLHL1Q9NR64 748 aa10.39□□□□□ -0.75
ZNF548-211ENST00000600927 SERINC1Q9NRX5 453 aa10.39□□□□□ -0.75
ZNF548-211ENST00000600927 HPF1Q9NWY4 346 aa10.39□□□□□ -0.75
ZNF548-211ENST00000600927 AASSQ9UDR5 926 aa10.39□□□□□ -0.75
ZNF548-211ENST00000600927 CHRNA9Q9UGM1 479 aa10.39□□□□□ -0.75
ZNF548-211ENST00000600927 ERGIC3Q9Y282 383 aa10.39□□□□□ -0.75
ZNF548-211ENST00000600927 EXOGQ9Y2C4 368 aaKnown RBP10.39□□□□□ -0.75
ZNF548-211ENST00000600927 TMED7Q9Y3B3 224 aa10.39□□□□□ -0.75
ZNF548-211ENST00000600927 MRPS18CQ9Y3D5 142 aaKnown RBP10.39□□□□□ -0.75
ZNF548-211ENST00000600927 CORINQ9Y5Q5 1042 aa10.39□□□□□ -0.75
ZNF548-211ENST00000600927 SPIN1Q9Y657 262 aaPredicted RBP10.39□□□□□ -0.75
ZNF548-211ENST00000600927 HIVEP3Q5T1R4 2406 aa10.39□□□□□ -0.75
ZNF548-211ENST00000600927 HEATR5AQ86XA9 2040 aa10.39□□□□□ -0.75
ZNF548-211ENST00000600927 NBPF19A0A087WUL8 3843 aa10.39□□□□□ -0.75
ZNF548-211ENST00000600927 RP1L1Q8IWN7 2480 aaPredicted RBP10.39□□□□□ -0.75
ZNF548-211ENST00000600927 NPIPB13A6NJU9 1138 aa10.38□□□□□ -0.75
ZNF548-211ENST00000600927 SLC22A31A6NKX4 558 aa10.38□□□□□ -0.75
ZNF548-211ENST00000600927 NPIPB4C9JG80 1138 aa10.38□□□□□ -0.75
ZNF548-211ENST00000600927 PRR23D1E9PI22 279 aaPredicted RBP10.38□□□□□ -0.75
ZNF548-211ENST00000600927 KPNA4O00629 521 aaPredicted RBP10.38□□□□□ -0.75
ZNF548-211ENST00000600927 SUSD5O60279 629 aa10.38□□□□□ -0.75
ZNF548-211ENST00000600927 WISP2O76076 250 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms