RNA–Protein interactions for RNA: ENST00000600648.1

FARP1-231, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

TSL 5

Gene FARP1, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-231	ENST00000600648	BMP4	P12644	408 aa		18.8	■□□□□ 0.6
FARP1-231	ENST00000600648	ETS2	P15036	469 aa		18.8	■□□□□ 0.6
FARP1-231	ENST00000600648	ZNF43	P17038	809 aa		18.8	■□□□□ 0.6
FARP1-231	ENST00000600648	PRKAR1B	P31321	381 aa		18.8	■□□□□ 0.6
FARP1-231	ENST00000600648	AQP5	P55064	265 aa		18.8	■□□□□ 0.6
FARP1-231	ENST00000600648	DSCR9	P59020	149 aa		18.8	■□□□□ 0.6
FARP1-231	ENST00000600648	CDK6	Q00534	326 aa		18.8	■□□□□ 0.6
FARP1-231	ENST00000600648	ROR2	Q01974	943 aa	Known RBP	18.8	■□□□□ 0.6
FARP1-231	ENST00000600648	C1D	Q13901	141 aa	Known RBP	18.8	■□□□□ 0.6
FARP1-231	ENST00000600648	GLIPR1L2	Q4G1C9	344 aa		18.8	■□□□□ 0.6
FARP1-231	ENST00000600648	LRIF1	Q5T3J3	769 aa		18.8	■□□□□ 0.6
FARP1-231	ENST00000600648	NANOS1	Q8WY41	292 aa	Known RBP	18.8	■□□□□ 0.6
FARP1-231	ENST00000600648	SLC35B4	Q969S0	331 aa		18.8	■□□□□ 0.6
FARP1-231	ENST00000600648	OBP2B	Q9NPH6	170 aa		18.8	■□□□□ 0.6
FARP1-231	ENST00000600648	VAPA	Q9P0L0	249 aa		18.8	■□□□□ 0.6
FARP1-231	ENST00000600648	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	18.8	■□□□□ 0.6
FARP1-231	ENST00000600648	COL6A5	A8TX70	2615 aa		18.8	■□□□□ 0.6
FARP1-231	ENST00000600648	OR6C65	A6NJZ3	312 aa		18.79	■□□□□ 0.6
FARP1-231	ENST00000600648		A8MV72	311 aa	Predicted RBP	18.79	■□□□□ 0.6
FARP1-231	ENST00000600648		M0R082	166 aa		18.79	■□□□□ 0.6
FARP1-231	ENST00000600648	TGDS	O95455	350 aa		18.79	■□□□□ 0.6
FARP1-231	ENST00000600648	AQP1	P29972	269 aa		18.79	■□□□□ 0.6
FARP1-231	ENST00000600648	MRPL19	P49406	292 aa	Known RBP	18.79	■□□□□ 0.6
FARP1-231	ENST00000600648	EFNA4	P52798	201 aa		18.79	■□□□□ 0.6
FARP1-231	ENST00000600648	ARF1	P84077	181 aa	Known RBP	18.79	■□□□□ 0.6
FARP1-231	ENST00000600648	MST1L	Q2TV78	715 aa		18.79	■□□□□ 0.6
FARP1-231	ENST00000600648	TMEM249	Q2WGJ8	235 aa		18.79	■□□□□ 0.6
FARP1-231	ENST00000600648	AGK	Q53H12	422 aa		18.79	■□□□□ 0.6
FARP1-231	ENST00000600648	REEP3	Q6NUK4	255 aa		18.79	■□□□□ 0.6
FARP1-231	ENST00000600648	VHLL	Q6RSH7	139 aa		18.79	■□□□□ 0.6
FARP1-231	ENST00000600648	KRT73	Q86Y46	540 aa		18.79	■□□□□ 0.6
FARP1-231	ENST00000600648	ZNF417	Q8TAU3	575 aa		18.79	■□□□□ 0.6
FARP1-231	ENST00000600648	TNFRSF13C	Q96RJ3	184 aa		18.79	■□□□□ 0.6
FARP1-231	ENST00000600648	ZNF587	Q96SQ5	575 aa	Predicted RBP	18.79	■□□□□ 0.6
FARP1-231	ENST00000600648	IKZF5	Q9H5V7	419 aa		18.79	■□□□□ 0.6
FARP1-231	ENST00000600648	SEC61A2	Q9H9S3	476 aa		18.79	■□□□□ 0.6
FARP1-231	ENST00000600648	B3GAT1	Q9P2W7	334 aa		18.79	■□□□□ 0.6
FARP1-231	ENST00000600648	IGKV1D-42	A0A075B6H8	117 aa		18.78	■□□□□ 0.6
FARP1-231	ENST00000600648	GRPR	P30550	384 aa		18.78	■□□□□ 0.6
FARP1-231	ENST00000600648	ALG10B	Q5I7T1	473 aa		18.78	■□□□□ 0.6
FARP1-231	ENST00000600648	C1QTNF12	Q5T7M4	302 aa		18.78	■□□□□ 0.6
FARP1-231	ENST00000600648	ANKRD16	Q6P6B7	361 aa		18.78	■□□□□ 0.6
FARP1-231	ENST00000600648	C6orf89	Q6UWU4	347 aa		18.78	■□□□□ 0.6
FARP1-231	ENST00000600648	C10orf105	Q8TEF2	133 aa		18.78	■□□□□ 0.6
FARP1-231	ENST00000600648	SLC38A4	Q969I6	547 aa		18.78	■□□□□ 0.6
FARP1-231	ENST00000600648	BOD1	Q96IK1	185 aa		18.78	■□□□□ 0.6
FARP1-231	ENST00000600648	OXGR1	Q96P68	337 aa		18.78	■□□□□ 0.6
FARP1-231	ENST00000600648	CCDC28B	Q9BUN5	200 aa		18.78	■□□□□ 0.6
FARP1-231	ENST00000600648	LINC00470	Q9BZP3	86 aa		18.78	■□□□□ 0.6
FARP1-231	ENST00000600648	NELFA	Q9H3P2	528 aa		18.78	■□□□□ 0.6
FARP1-231	ENST00000600648	SLC52A3	Q9NQ40	469 aa		18.78	■□□□□ 0.6
FARP1-231	ENST00000600648	RTTN	Q86VV8	2226 aa		18.78	■□□□□ 0.6
FARP1-231	ENST00000600648	AIM2	O14862	343 aa		18.77	■□□□□ 0.6
FARP1-231	ENST00000600648	SLC43A1	O75387	559 aa		18.77	■□□□□ 0.6
FARP1-231	ENST00000600648	ZNF432	O94892	652 aa		18.77	■□□□□ 0.6
FARP1-231	ENST00000600648	CRYAA	P02489	173 aa		18.77	■□□□□ 0.6
FARP1-231	ENST00000600648	CECR9	P0C854	216 aa		18.77	■□□□□ 0.6
FARP1-231	ENST00000600648	SLC25A16	P16260	332 aa		18.77	■□□□□ 0.6
FARP1-231	ENST00000600648	PPIB	P23284	216 aa	Known RBP	18.77	■□□□□ 0.6
FARP1-231	ENST00000600648	NCALD	P61601	193 aa		18.77	■□□□□ 0.6
FARP1-231	ENST00000600648	NAAA	Q02083	359 aa		18.77	■□□□□ 0.6
FARP1-231	ENST00000600648	SCARB2	Q14108	478 aa		18.77	■□□□□ 0.6
FARP1-231	ENST00000600648	SWI5	Q1ZZU3	235 aa		18.77	■□□□□ 0.6
FARP1-231	ENST00000600648	C6orf52	Q5T4I8	152 aa		18.77	■□□□□ 0.6
FARP1-231	ENST00000600648	FAM69A	Q5T7M9	428 aa		18.77	■□□□□ 0.6
FARP1-231	ENST00000600648	DHRS4L2	Q6PKH6	230 aa		18.77	■□□□□ 0.6
FARP1-231	ENST00000600648	CXXC5	Q7LFL8	322 aa	Known RBP	18.77	■□□□□ 0.6
FARP1-231	ENST00000600648	HIPK1	Q86Z02	1210 aa		18.77	■□□□□ 0.6
FARP1-231	ENST00000600648	LSMEM1	Q8N8F7	131 aa		18.77	■□□□□ 0.6
FARP1-231	ENST00000600648	DYDC1	Q8WWB3	177 aa		18.77	■□□□□ 0.6
FARP1-231	ENST00000600648	SPATA5L1	Q9BVQ7	753 aa		18.77	■□□□□ 0.6
FARP1-231	ENST00000600648	C12orf10	Q9HB07	376 aa		18.77	■□□□□ 0.6
FARP1-231	ENST00000600648	CA10	Q9NS85	328 aa		18.77	■□□□□ 0.6
FARP1-231	ENST00000600648	RCE1	Q9Y256	329 aa		18.77	■□□□□ 0.6
FARP1-231	ENST00000600648	CUBN	O60494	3623 aa		18.77	■□□□□ 0.6
FARP1-231	ENST00000600648	TRAV36DV7	A0A075B6V5	113 aa		18.76	■□□□□ 0.59
FARP1-231	ENST00000600648	ARPC4-TTLL3	A0A0A6YYG9	625 aa		18.76	■□□□□ 0.59
FARP1-231	ENST00000600648	OR2T1	O43869	369 aa		18.76	■□□□□ 0.59
FARP1-231	ENST00000600648	SEC14L2	O76054	403 aa		18.76	■□□□□ 0.59
FARP1-231	ENST00000600648	CELA3B	P08861	270 aa		18.76	■□□□□ 0.59
FARP1-231	ENST00000600648	SERPINF1	P36955	418 aa		18.76	■□□□□ 0.59
FARP1-231	ENST00000600648	RGS8	P57771	180 aa	Predicted RBP	18.76	■□□□□ 0.59
FARP1-231	ENST00000600648	SNRPD2	P62316	118 aa	Known RBP	18.76	■□□□□ 0.59
FARP1-231	ENST00000600648	LOXL1	Q08397	574 aa	Predicted RBP	18.76	■□□□□ 0.59
FARP1-231	ENST00000600648	CARTPT	Q16568	116 aa		18.76	■□□□□ 0.59
FARP1-231	ENST00000600648	CARD17	Q5XLA6	110 aa		18.76	■□□□□ 0.59
FARP1-231	ENST00000600648	H1FNT	Q75WM6	255 aa	Predicted RBP	18.76	■□□□□ 0.59
FARP1-231	ENST00000600648	SLC46A3	Q7Z3Q1	461 aa		18.76	■□□□□ 0.59
FARP1-231	ENST00000600648	GPR137C	Q8N3F9	429 aa		18.76	■□□□□ 0.59
FARP1-231	ENST00000600648	ANKS4B	Q8N8V4	417 aa		18.76	■□□□□ 0.59
FARP1-231	ENST00000600648	DNAJA4	Q8WW22	397 aa	Predicted RBP	18.76	■□□□□ 0.59
FARP1-231	ENST00000600648	ZNF837	Q96EG3	531 aa	Predicted RBP	18.76	■□□□□ 0.59
FARP1-231	ENST00000600648	THOC1	Q96FV9	657 aa	Known RBP	18.76	■□□□□ 0.59
FARP1-231	ENST00000600648	SORCS2	Q96PQ0	1159 aa		18.76	■□□□□ 0.59
FARP1-231	ENST00000600648	VRK1	Q99986	396 aa	Predicted RBP	18.76	■□□□□ 0.59
FARP1-231	ENST00000600648	WFDC6	Q9BQY6	131 aa		18.76	■□□□□ 0.59
FARP1-231	ENST00000600648	KATNB1	Q9BVA0	655 aa		18.76	■□□□□ 0.59
FARP1-231	ENST00000600648	CRLF2	Q9HC73	371 aa		18.76	■□□□□ 0.59
FARP1-231	ENST00000600648	GPR35	Q9HC97	309 aa		18.76	■□□□□ 0.59
FARP1-231	ENST00000600648	SELENON	Q9NZV5	590 aa		18.76	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms