RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 CDKN2CP42773 168 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 SEC24CP53992 1094 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 SH3BGRP55822 239 aaPredicted RBP5.25□□□□□ -1.57
VRK3-220ENST00000600259 TMEM33P57088 247 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 HILS1P60008 231 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 UBE2NP61088 152 aaKnown RBP5.25□□□□□ -1.57
VRK3-220ENST00000600259 ROR2Q01974 943 aaKnown RBP5.25□□□□□ -1.57
VRK3-220ENST00000600259 CCNIQ14094 377 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 FXNQ16595 210 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 SLC9B1Q4ZJI4 515 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 GPAT3Q53EU6 434 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 SPANXN4Q5MJ08 99 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 PHYHD1Q5SRE7 291 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 ANXA8L1Q5VT79 327 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 C1orf140Q5VVS0 124 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 NIPAL3Q6P499 406 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 RINLQ6ZS11 566 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 ZNF627Q7L945 461 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 PEG10Q86TG7 708 aaKnown RBP5.25□□□□□ -1.57
VRK3-220ENST00000600259 GPAT4Q86UL3 456 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 MDP1Q86V88 176 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 LRP11Q86VZ4 500 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 RNF130Q86XS8 419 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 VRK2Q86Y07 508 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 TMEM123Q8N131 208 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 EIF1ADQ8N9N8 165 aaKnown RBP5.25□□□□□ -1.57
VRK3-220ENST00000600259 IL17RDQ8NFM7 739 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 MFSD8Q8NHS3 518 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 STK35Q8TDR2 534 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 TCP10LQ8TDR4 215 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 CKAP2Q8WWK9 683 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 MRPL24Q96A35 216 aaKnown RBP5.25□□□□□ -1.57
VRK3-220ENST00000600259 TMEM186Q96B77 213 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 APOPT1Q96IL0 206 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 ANKRD27Q96NW4 1050 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 ALKBH3Q96Q83 286 aaPredicted RBP5.25□□□□□ -1.57
VRK3-220ENST00000600259 KCNS3Q9BQ31 491 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 RHOXF2Q9BQY4 288 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 SLC35A5Q9BS91 424 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 MRPL37Q9BZE1 423 aaKnown RBP5.25□□□□□ -1.57
VRK3-220ENST00000600259 DPY30Q9C005 99 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 TPK1Q9H3S4 243 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 PPCSQ9HAB8 311 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 NOX3Q9HBY0 568 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 MOV10Q9HCE1 1003 aaKnown RBP5.25□□□□□ -1.57
VRK3-220ENST00000600259 ESM1Q9NQ30 184 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 G6PC2Q9NQR9 355 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 HIF1ANQ9NWT6 349 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 ADPRHL2Q9NX46 363 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 TREM2Q9NZC2 230 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 ZNF224Q9NZL3 707 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 NOP53Q9NZM5 478 aaKnown RBP5.25□□□□□ -1.57
VRK3-220ENST00000600259 SEC14L4Q9UDX3 406 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 BTNL2Q9UIR0 455 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 RASD1Q9Y272 281 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 PCDHB14Q9Y5E9 798 aa5.25□□□□□ -1.57
VRK3-220ENST00000600259 DSPPQ9NZW4 1301 aa5.24□□□□□ -1.57
VRK3-220ENST00000600259 CCDC154A6NI56 674 aa5.24□□□□□ -1.57
VRK3-220ENST00000600259 VSTM5A8MXK1 200 aa5.24□□□□□ -1.57
VRK3-220ENST00000600259 MS4A18H0YCH9 400 aa5.24□□□□□ -1.57
VRK3-220ENST00000600259 TRAF3IP2O43734 574 aaPredicted RBP5.24□□□□□ -1.57
VRK3-220ENST00000600259 SYNGR3O43761 229 aa5.24□□□□□ -1.57
VRK3-220ENST00000600259 TYROBPO43914 113 aa5.24□□□□□ -1.57
VRK3-220ENST00000600259 SPAG7O75391 227 aa5.24□□□□□ -1.57
VRK3-220ENST00000600259 DEAF1O75398 565 aaPredicted RBP5.24□□□□□ -1.57
VRK3-220ENST00000600259 KRT33AO76009 404 aa5.24□□□□□ -1.57
VRK3-220ENST00000600259 NCR1O76036 304 aa5.24□□□□□ -1.57
VRK3-220ENST00000600259 FSHBP01225 129 aa5.24□□□□□ -1.57
VRK3-220ENST00000600259 DBIP07108 87 aaKnown RBP5.24□□□□□ -1.57
VRK3-220ENST00000600259 MSMBP08118 114 aa5.24□□□□□ -1.57
VRK3-220ENST00000600259 NUDT17P0C025 328 aa5.24□□□□□ -1.57
VRK3-220ENST00000600259 GAAP10253 952 aa5.24□□□□□ -1.57
VRK3-220ENST00000600259 PNMTP11086 282 aa5.24□□□□□ -1.57
VRK3-220ENST00000600259 IL7RP16871 459 aa5.24□□□□□ -1.57
VRK3-220ENST00000600259 ZNF14P17017 642 aaPredicted RBP5.24□□□□□ -1.57
VRK3-220ENST00000600259 TCN1P20061 433 aaPredicted RBP5.24□□□□□ -1.57
VRK3-220ENST00000600259 PCMT1P22061 227 aa5.24□□□□□ -1.57
VRK3-220ENST00000600259 ACHEP22303 614 aa5.24□□□□□ -1.57
VRK3-220ENST00000600259 GLRXP35754 106 aa5.24□□□□□ -1.57
VRK3-220ENST00000600259 ARR3P36575 388 aa5.24□□□□□ -1.57
VRK3-220ENST00000600259 CLDN17P56750 224 aa5.24□□□□□ -1.57
VRK3-220ENST00000600259 MRPS11P82912 194 aaKnown RBP5.24□□□□□ -1.57
VRK3-220ENST00000600259 IL1RL1Q01638 556 aa5.24□□□□□ -1.57
VRK3-220ENST00000600259 MAD2L1Q13257 205 aaPredicted RBP5.24□□□□□ -1.57
VRK3-220ENST00000600259 DAG1Q14118 895 aa5.24□□□□□ -1.57
VRK3-220ENST00000600259 CEACAM16Q2WEN9 425 aa5.24□□□□□ -1.57
VRK3-220ENST00000600259 MS4A18Q3C1V0 323 aa5.24□□□□□ -1.57
VRK3-220ENST00000600259 AWAT1Q58HT5 328 aa5.24□□□□□ -1.57
VRK3-220ENST00000600259 PRR31Q5SQ13 230 aa5.24□□□□□ -1.57
VRK3-220ENST00000600259 WBP2NLQ6ICG8 309 aa5.24□□□□□ -1.57
VRK3-220ENST00000600259 KRT80Q6KB66 452 aa5.24□□□□□ -1.57
VRK3-220ENST00000600259 ZNF836Q6ZNA1 936 aa5.24□□□□□ -1.57
VRK3-220ENST00000600259 GLCCI1Q86VQ1 547 aa5.24□□□□□ -1.57
VRK3-220ENST00000600259 CCDC36Q8IYA8 594 aa5.24□□□□□ -1.57
VRK3-220ENST00000600259 ZNF440Q8IYI8 595 aa5.24□□□□□ -1.57
VRK3-220ENST00000600259 RIBC1Q8N443 379 aaPredicted RBP5.24□□□□□ -1.57
VRK3-220ENST00000600259 C3orf56Q8N813 242 aa5.24□□□□□ -1.57
VRK3-220ENST00000600259 ZDHHC22Q8N966 263 aa5.24□□□□□ -1.57
VRK3-220ENST00000600259 OR52P1PQ8NH57 321 aa5.24□□□□□ -1.57
VRK3-220ENST00000600259 ZNF418Q8TF45 676 aaPredicted RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms