RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 RIPK1Q13546 671 aa11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 SLC17A1Q14916 467 aa11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 POU4F3Q15319 338 aa11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 GUSBP1Q15486 140 aa11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 MS4A18Q3C1V0 323 aa11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 ANKDD1AQ495B1 522 aa11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 ANKRD34AQ69YU3 496 aa11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 NHLRC1Q6VVB1 395 aa11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 NANOGNBQ7Z5D8 188 aa11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 MARVELD2Q8N4S9 558 aa11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 LRRC75AQ8NAA5 344 aa11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 ABHD3Q8WU67 409 aa11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 TNFRSF13CQ96RJ3 184 aa11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 NIPSNAP1Q9BPW8 284 aa11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 SF3B5Q9BWJ5 86 aaKnown RBP11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 RNPEPL1Q9HAU8 725 aa11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 BCO1Q9HAY6 547 aa11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 MCCC2Q9HCC0 563 aa11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 GP6Q9HCN6 339 aa11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 NKX1-2Q9UD57 310 aaPredicted RBP11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 RASD1Q9Y272 281 aa11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 MEMO1Q9Y316 297 aa11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 NBASA2RRP1 2371 aa11.28□□□□□ -0.6
CHMP2A-206ENST00000600118 UNC119BA6NIH7 251 aa11.27□□□□□ -0.61
CHMP2A-206ENST00000600118 RCBTB2O95199 551 aa11.27□□□□□ -0.61
CHMP2A-206ENST00000600118 HIST1H2ABP04908 130 aa11.27□□□□□ -0.61
CHMP2A-206ENST00000600118 CEACAM8P31997 349 aaPredicted RBP11.27□□□□□ -0.61
CHMP2A-206ENST00000600118 AQP2P41181 271 aa11.27□□□□□ -0.61
CHMP2A-206ENST00000600118 DAPP51397 102 aa11.27□□□□□ -0.61
CHMP2A-206ENST00000600118 FXYD6P3P58550 94 aa11.27□□□□□ -0.61
CHMP2A-206ENST00000600118 PPP2R2BQ00005 443 aa11.27□□□□□ -0.61
CHMP2A-206ENST00000600118 PUDPQ08623 228 aa11.27□□□□□ -0.61
CHMP2A-206ENST00000600118 COX10Q12887 443 aa11.27□□□□□ -0.61
CHMP2A-206ENST00000600118 RNPS1Q15287 305 aaKnown RBP11.27□□□□□ -0.61
CHMP2A-206ENST00000600118 EIF2S3LQ2VIR3 472 aaKnown RBP11.27□□□□□ -0.61
CHMP2A-206ENST00000600118 ZBED5Q49AG3 693 aa11.27□□□□□ -0.61
CHMP2A-206ENST00000600118 RIPPLY2Q5TAB7 128 aa11.27□□□□□ -0.61
CHMP2A-206ENST00000600118 HIST3H2AQ7L7L0 130 aa11.27□□□□□ -0.61
CHMP2A-206ENST00000600118 OAFQ86UD1 273 aa11.27□□□□□ -0.61
CHMP2A-206ENST00000600118 STK32CQ86UX6 486 aa11.27□□□□□ -0.61
CHMP2A-206ENST00000600118 ICA1LQ8NDH6 482 aa11.27□□□□□ -0.61
CHMP2A-206ENST00000600118 MOSPD2Q8NHP6 518 aa11.27□□□□□ -0.61
CHMP2A-206ENST00000600118 HIST1H2ACQ93077 130 aa11.27□□□□□ -0.61
CHMP2A-206ENST00000600118 GTPBP3Q969Y2 492 aaKnown RBP11.27□□□□□ -0.61
CHMP2A-206ENST00000600118 OXGR1Q96P68 337 aa11.27□□□□□ -0.61
CHMP2A-206ENST00000600118 TM9SF2Q99805 663 aa11.27□□□□□ -0.61
CHMP2A-206ENST00000600118 OSBPL10Q9BXB5 764 aa11.27□□□□□ -0.61
CHMP2A-206ENST00000600118 PRRG4Q9BZD6 226 aa11.27□□□□□ -0.61
CHMP2A-206ENST00000600118 GLRX2Q9NS18 164 aa11.27□□□□□ -0.61
CHMP2A-206ENST00000600118 KLHL9Q9P2J3 617 aa11.27□□□□□ -0.61
CHMP2A-206ENST00000600118 SH3BGRL2Q9UJC5 107 aa11.27□□□□□ -0.61
CHMP2A-206ENST00000600118 TRAV27A0A087WT01 109 aa11.26□□□□□ -0.61
CHMP2A-206ENST00000600118 ZNF724A8MTY0 619 aa11.26□□□□□ -0.61
CHMP2A-206ENST00000600118 PDLIM1O00151 329 aa11.26□□□□□ -0.61
CHMP2A-206ENST00000600118 CASQ2O14958 399 aaPredicted RBP11.26□□□□□ -0.61
CHMP2A-206ENST00000600118 SS18L1O75177 396 aaPredicted RBP11.26□□□□□ -0.61
CHMP2A-206ENST00000600118 TP53P04637 393 aaPredicted RBP11.26□□□□□ -0.61
CHMP2A-206ENST00000600118 CRHP06850 196 aa11.26□□□□□ -0.61
CHMP2A-206ENST00000600118 ADORA3P0DMS8 318 aa11.26□□□□□ -0.61
CHMP2A-206ENST00000600118 POU2F1P14859 743 aa11.26□□□□□ -0.61
CHMP2A-206ENST00000600118 GSTM3P21266 225 aa11.26□□□□□ -0.61
CHMP2A-206ENST00000600118 RPL18Q07020 188 aaKnown RBP11.26□□□□□ -0.61
CHMP2A-206ENST00000600118 RASGEF1BQ0VAM2 473 aa11.26□□□□□ -0.61
CHMP2A-206ENST00000600118 KDM4DQ6B0I6 523 aa11.26□□□□□ -0.61
CHMP2A-206ENST00000600118 GTF2IRD2BQ6EKJ0 949 aa11.26□□□□□ -0.61
CHMP2A-206ENST00000600118 TMEM225Q6GV28 225 aa11.26□□□□□ -0.61
CHMP2A-206ENST00000600118 TMEM211Q6ICI0 200 aa11.26□□□□□ -0.61
CHMP2A-206ENST00000600118 OR2A2Q6IF42 318 aa11.26□□□□□ -0.61
CHMP2A-206ENST00000600118 PPP4R4Q6NUP7 873 aa11.26□□□□□ -0.61
CHMP2A-206ENST00000600118 KLHL17Q6TDP4 642 aa11.26□□□□□ -0.61
CHMP2A-206ENST00000600118 ZNF620Q6ZNG0 422 aa11.26□□□□□ -0.61
CHMP2A-206ENST00000600118 RASSF6Q6ZTQ3 369 aa11.26□□□□□ -0.61
CHMP2A-206ENST00000600118 P4HA3Q7Z4N8 544 aa11.26□□□□□ -0.61
CHMP2A-206ENST00000600118 PXKQ7Z7A4 578 aa11.26□□□□□ -0.61
CHMP2A-206ENST00000600118 GTF2IRD2Q86UP8 949 aa11.26□□□□□ -0.61
CHMP2A-206ENST00000600118 KIF18BQ86Y91 864 aa11.26□□□□□ -0.61
CHMP2A-206ENST00000600118 KDM8Q8N371 416 aa11.26□□□□□ -0.61
CHMP2A-206ENST00000600118 CLDN22Q8N7P3 220 aa11.26□□□□□ -0.61
CHMP2A-206ENST00000600118 ZIC4Q8N9L1 334 aa11.26□□□□□ -0.61
CHMP2A-206ENST00000600118 ATG16L2Q8NAA4 619 aa11.26□□□□□ -0.61
CHMP2A-206ENST00000600118 OR9K2Q8NGE7 335 aa11.26□□□□□ -0.61
CHMP2A-206ENST00000600118 OR51A7Q8NH64 312 aa11.26□□□□□ -0.61
CHMP2A-206ENST00000600118 DNAJC9Q8WXX5 260 aa11.26□□□□□ -0.61
CHMP2A-206ENST00000600118 GMPPAQ96IJ6 420 aaPredicted RBP11.26□□□□□ -0.61
CHMP2A-206ENST00000600118 ZFP3Q96NJ6 502 aa11.26□□□□□ -0.61
CHMP2A-206ENST00000600118 GPX7Q96SL4 187 aaPredicted RBP11.26□□□□□ -0.61
CHMP2A-206ENST00000600118 CIB1Q99828 191 aa11.26□□□□□ -0.61
CHMP2A-206ENST00000600118 UCK2Q9BZX2 261 aa11.26□□□□□ -0.61
CHMP2A-206ENST00000600118 ENKD1Q9H0I2 346 aa11.26□□□□□ -0.61
CHMP2A-206ENST00000600118 SMURF2Q9HAU4 748 aa11.26□□□□□ -0.61
CHMP2A-206ENST00000600118 USE1Q9NZ43 259 aa11.26□□□□□ -0.61
CHMP2A-206ENST00000600118 KLHL13Q9P2N7 655 aa11.26□□□□□ -0.61
CHMP2A-206ENST00000600118 REV1Q9UBZ9 1251 aa11.26□□□□□ -0.61
CHMP2A-206ENST00000600118 TMEFF2Q9UIK5 374 aaPredicted RBP11.26□□□□□ -0.61
CHMP2A-206ENST00000600118 RP1L1Q8IWN7 2480 aaPredicted RBP11.26□□□□□ -0.61
CHMP2A-206ENST00000600118 A0A1B0GUH1 482 aa11.25□□□□□ -0.61
CHMP2A-206ENST00000600118 NPIPB13A6NJU9 1138 aa11.25□□□□□ -0.61
CHMP2A-206ENST00000600118 NPIPB4C9JG80 1138 aa11.25□□□□□ -0.61
CHMP2A-206ENST00000600118 BLOC1S5-TXNDC5H3BN57 136 aa11.25□□□□□ -0.61
CHMP2A-206ENST00000600118 TRAF3IP2O43734 574 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms