RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 SRP14P37108 136 aaKnown RBP14.9□□□□□ -0.02
SMG9-210ENST00000600097 CDKN2CP42773 168 aa14.9□□□□□ -0.02
SMG9-210ENST00000600097 SLC1A6P48664 564 aa14.9□□□□□ -0.02
SMG9-210ENST00000600097 UFM1P61960 85 aa14.9□□□□□ -0.02
SMG9-210ENST00000600097 TUBA1BP68363 451 aa14.9□□□□□ -0.02
SMG9-210ENST00000600097 TUBA4AP68366 448 aa14.9□□□□□ -0.02
SMG9-210ENST00000600097 ROR2Q01974 943 aaKnown RBP14.9□□□□□ -0.02
SMG9-210ENST00000600097 COX20Q5RI15 118 aa14.9□□□□□ -0.02
SMG9-210ENST00000600097 RNF220Q5VTB9 566 aa14.9□□□□□ -0.02
SMG9-210ENST00000600097 ZNF836Q6ZNA1 936 aa14.9□□□□□ -0.02
SMG9-210ENST00000600097 TUBA1AQ71U36 451 aa14.9□□□□□ -0.02
SMG9-210ENST00000600097 LINGO2Q7L985 606 aa14.9□□□□□ -0.02
SMG9-210ENST00000600097 VRK2Q86Y07 508 aa14.9□□□□□ -0.02
SMG9-210ENST00000600097 ZNF786Q8N393 782 aa14.9□□□□□ -0.02
SMG9-210ENST00000600097 LINC01356Q8N9X3 169 aa14.9□□□□□ -0.02
SMG9-210ENST00000600097 MFSD8Q8NHS3 518 aa14.9□□□□□ -0.02
SMG9-210ENST00000600097 PNPT1Q8TCS8 783 aaKnown RBP14.9□□□□□ -0.02
SMG9-210ENST00000600097 STK35Q8TDR2 534 aa14.9□□□□□ -0.02
SMG9-210ENST00000600097 SORT1Q99523 831 aa14.9□□□□□ -0.02
SMG9-210ENST00000600097 DOK1Q99704 481 aa14.9□□□□□ -0.02
SMG9-210ENST00000600097 PAIP2Q9BPZ3 127 aaKnown RBP14.9□□□□□ -0.02
SMG9-210ENST00000600097 C20orf27Q9GZN8 174 aa14.9□□□□□ -0.02
SMG9-210ENST00000600097 NELFAQ9H3P2 528 aa14.9□□□□□ -0.02
SMG9-210ENST00000600097 ARMC7Q9H6L4 198 aa14.9□□□□□ -0.02
SMG9-210ENST00000600097 MEAF6Q9HAF1 191 aa14.9□□□□□ -0.02
SMG9-210ENST00000600097 TMEFF2Q9UIK5 374 aaPredicted RBP14.9□□□□□ -0.02
SMG9-210ENST00000600097 RCE1Q9Y256 329 aa14.9□□□□□ -0.02
SMG9-210ENST00000600097 LILRA1O75019 489 aa14.89□□□□□ -0.03
SMG9-210ENST00000600097 GSNP06396 782 aa14.89□□□□□ -0.03
SMG9-210ENST00000600097 ZNF43P17038 809 aa14.89□□□□□ -0.03
SMG9-210ENST00000600097 NCF2P19878 526 aaPredicted RBP14.89□□□□□ -0.03
SMG9-210ENST00000600097 PCMT1P22061 227 aa14.89□□□□□ -0.03
SMG9-210ENST00000600097 APEX1P27695 318 aaKnown RBP14.89□□□□□ -0.03
SMG9-210ENST00000600097 THBS4P35443 961 aa14.89□□□□□ -0.03
SMG9-210ENST00000600097 ARR3P36575 388 aa14.89□□□□□ -0.03
SMG9-210ENST00000600097 CRISP3P54108 245 aa14.89□□□□□ -0.03
SMG9-210ENST00000600097 NME5P56597 212 aa14.89□□□□□ -0.03
SMG9-210ENST00000600097 HGFACQ04756 655 aa14.89□□□□□ -0.03
SMG9-210ENST00000600097 LARS2Q15031 903 aaKnown RBP14.89□□□□□ -0.03
SMG9-210ENST00000600097 MAPK11Q15759 364 aa14.89□□□□□ -0.03
SMG9-210ENST00000600097 SPATA21Q7Z572 469 aa14.89□□□□□ -0.03
SMG9-210ENST00000600097 CCDC36Q8IYA8 594 aa14.89□□□□□ -0.03
SMG9-210ENST00000600097 ANKRD42Q8N9B4 389 aa14.89□□□□□ -0.03
SMG9-210ENST00000600097 IL17RDQ8NFM7 739 aa14.89□□□□□ -0.03
SMG9-210ENST00000600097 ZBTB18Q99592 522 aa14.89□□□□□ -0.03
SMG9-210ENST00000600097 CACYBPQ9HB71 228 aaKnown RBP14.89□□□□□ -0.03
SMG9-210ENST00000600097 AIG1Q9NVV5 245 aa14.89□□□□□ -0.03
SMG9-210ENST00000600097 ZNF232Q9UNY5 417 aa14.89□□□□□ -0.03
SMG9-210ENST00000600097 SVEP1Q4LDE5 3571 aa14.89□□□□□ -0.03
SMG9-210ENST00000600097 TMEM229AB2RXF0 380 aa14.88□□□□□ -0.03
SMG9-210ENST00000600097 RFXANKO14593 260 aa14.88□□□□□ -0.03
SMG9-210ENST00000600097 ALDOCP09972 364 aaKnown RBP14.88□□□□□ -0.03
SMG9-210ENST00000600097 GTF2E2P29084 291 aaKnown RBP14.88□□□□□ -0.03
SMG9-210ENST00000600097 CLDN17P56750 224 aa14.88□□□□□ -0.03
SMG9-210ENST00000600097 ARF1P84077 181 aaKnown RBP14.88□□□□□ -0.03
SMG9-210ENST00000600097 MPP2Q14168 576 aa14.88□□□□□ -0.03
SMG9-210ENST00000600097 SVOPLQ8N434 492 aa14.88□□□□□ -0.03
SMG9-210ENST00000600097 GLB1L3Q8NCI6 653 aaPredicted RBP14.88□□□□□ -0.03
SMG9-210ENST00000600097 UBASH3BQ8TF42 649 aa14.88□□□□□ -0.03
SMG9-210ENST00000600097 ATP6V1G3Q96LB4 118 aa14.88□□□□□ -0.03
SMG9-210ENST00000600097 SEC61A2Q9H9S3 476 aa14.88□□□□□ -0.03
SMG9-210ENST00000600097 DYNLRB1Q9NP97 96 aa14.88□□□□□ -0.03
SMG9-210ENST00000600097 ZNF443Q9Y2A4 671 aaPredicted RBP14.88□□□□□ -0.03
SMG9-210ENST00000600097 IGHV2OR16-5A0A0B4J2B6 119 aa14.87□□□□□ -0.03
SMG9-210ENST00000600097 FTCDNL1E5RQL4 147 aa14.87□□□□□ -0.03
SMG9-210ENST00000600097 SLC43A1O75387 559 aa14.87□□□□□ -0.03
SMG9-210ENST00000600097 ZNF432O94892 652 aa14.87□□□□□ -0.03
SMG9-210ENST00000600097 PNMTP11086 282 aa14.87□□□□□ -0.03
SMG9-210ENST00000600097 PRG2P13727 222 aa14.87□□□□□ -0.03
SMG9-210ENST00000600097 IFNGR1P15260 489 aa14.87□□□□□ -0.03
SMG9-210ENST00000600097 IL12AP29459 219 aa14.87□□□□□ -0.03
SMG9-210ENST00000600097 IL2RGP31785 369 aa14.87□□□□□ -0.03
SMG9-210ENST00000600097 CRATP43155 626 aa14.87□□□□□ -0.03
SMG9-210ENST00000600097 MVDP53602 400 aa14.87□□□□□ -0.03
SMG9-210ENST00000600097 CDH15P55291 814 aa14.87□□□□□ -0.03
SMG9-210ENST00000600097 POU3F1Q03052 451 aaPredicted RBP14.87□□□□□ -0.03
SMG9-210ENST00000600097 RIN1Q13671 783 aa14.87□□□□□ -0.03
SMG9-210ENST00000600097 ADRM1Q16186 407 aa14.87□□□□□ -0.03
SMG9-210ENST00000600097 MEX3DQ86XN8 651 aaKnown RBP14.87□□□□□ -0.03
SMG9-210ENST00000600097 CLIP4Q8N3C7 705 aa14.87□□□□□ -0.03
SMG9-210ENST00000600097 GPR137CQ8N3F9 429 aa14.87□□□□□ -0.03
SMG9-210ENST00000600097 CKAP2Q8WWK9 683 aa14.87□□□□□ -0.03
SMG9-210ENST00000600097 SLC25A36Q96CQ1 311 aa14.87□□□□□ -0.03
SMG9-210ENST00000600097 C1orf159Q96HA4 380 aa14.87□□□□□ -0.03
SMG9-210ENST00000600097 SNX18Q96RF0 628 aa14.87□□□□□ -0.03
SMG9-210ENST00000600097 SPATA9Q9BWV2 254 aa14.87□□□□□ -0.03
SMG9-210ENST00000600097 THUMPD1Q9NXG2 353 aaKnown RBP14.87□□□□□ -0.03
SMG9-210ENST00000600097 ANK2Q01484 3957 aa14.86□□□□□ -0.03
SMG9-210ENST00000600097 A0A0G2JPF8 293 aa14.86□□□□□ -0.03
SMG9-210ENST00000600097 TMEM129A0AVI4 362 aa14.86□□□□□ -0.03
SMG9-210ENST00000600097 SH3PXD2BA1X283 911 aa14.86□□□□□ -0.03
SMG9-210ENST00000600097 TMEM247A6NEH6 219 aa14.86□□□□□ -0.03
SMG9-210ENST00000600097 HMGB1P1B2RPK0 211 aaPredicted RBP14.86□□□□□ -0.03
SMG9-210ENST00000600097 HNRNPCL2B2RXH8 293 aa14.86□□□□□ -0.03
SMG9-210ENST00000600097 HNRNPCL3B7ZW38 293 aa14.86□□□□□ -0.03
SMG9-210ENST00000600097 HNRNPCL1O60812 293 aaKnown RBP14.86□□□□□ -0.03
SMG9-210ENST00000600097 IL6P05231 212 aa14.86□□□□□ -0.03
SMG9-210ENST00000600097 BCHEP06276 602 aa14.86□□□□□ -0.03
SMG9-210ENST00000600097 CELA3BP08861 270 aa14.86□□□□□ -0.03
SMG9-210ENST00000600097 HNRNPCL4P0DMR1 293 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms