RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 GABRA6Q16445 453 aa12.46□□□□□ -0.41
LIG1-218ENST00000599322 NRF1Q16656 503 aa12.46□□□□□ -0.41
LIG1-218ENST00000599322 C9orf135Q5VTT2 229 aa12.46□□□□□ -0.41
LIG1-218ENST00000599322 UEVLDQ8IX04 471 aa12.46□□□□□ -0.41
LIG1-218ENST00000599322 LRRC75A-AS1Q8N1F1 130 aa12.46□□□□□ -0.41
LIG1-218ENST00000599322 GPR137CQ8N3F9 429 aa12.46□□□□□ -0.41
LIG1-218ENST00000599322 SCAIQ8N9R8 606 aa12.46□□□□□ -0.41
LIG1-218ENST00000599322 OR2T12Q8NG77 320 aa12.46□□□□□ -0.41
LIG1-218ENST00000599322 C10orf82Q8WW14 230 aa12.46□□□□□ -0.41
LIG1-218ENST00000599322 TAAR8Q969N4 342 aa12.46□□□□□ -0.41
LIG1-218ENST00000599322 CMTM5Q96DZ9 223 aa12.46□□□□□ -0.41
LIG1-218ENST00000599322 POM121Q96HA1 1249 aa12.46□□□□□ -0.41
LIG1-218ENST00000599322 MPP4Q96JB8 637 aa12.46□□□□□ -0.41
LIG1-218ENST00000599322 MUS81Q96NY9 551 aa12.46□□□□□ -0.41
LIG1-218ENST00000599322 ZNF385AQ96PM9 386 aaKnown RBP12.46□□□□□ -0.41
LIG1-218ENST00000599322 ZNF317Q96PQ6 595 aaPredicted RBP12.46□□□□□ -0.41
LIG1-218ENST00000599322 KCNS3Q9BQ31 491 aa12.46□□□□□ -0.41
LIG1-218ENST00000599322 ELAC2Q9BQ52 826 aaKnown RBP12.46□□□□□ -0.41
LIG1-218ENST00000599322 PRR14Q9BWN1 585 aa12.46□□□□□ -0.41
LIG1-218ENST00000599322 FAM107BQ9H098 131 aa12.46□□□□□ -0.41
LIG1-218ENST00000599322 ALG2Q9H553 416 aa12.46□□□□□ -0.41
LIG1-218ENST00000599322 MOV10Q9HCE1 1003 aaKnown RBP12.46□□□□□ -0.41
LIG1-218ENST00000599322 B3GAT2Q9NPZ5 323 aa12.46□□□□□ -0.41
LIG1-218ENST00000599322 ARMCX1Q9P291 453 aa12.46□□□□□ -0.41
LIG1-218ENST00000599322 RCE1Q9Y256 329 aa12.46□□□□□ -0.41
LIG1-218ENST00000599322 SH3GLB1Q9Y371 365 aa12.46□□□□□ -0.41
LIG1-218ENST00000599322 ACANP16112 2415 aa12.46□□□□□ -0.42
LIG1-218ENST00000599322 A0A1W2PPR1 153 aa12.45□□□□□ -0.42
LIG1-218ENST00000599322 ELOVL7A1L3X0 281 aa12.45□□□□□ -0.42
LIG1-218ENST00000599322 CPSF4LA6NMK7 179 aaKnown RBP12.45□□□□□ -0.42
LIG1-218ENST00000599322 ZNF726A6NNF4 738 aa12.45□□□□□ -0.42
LIG1-218ENST00000599322 FTCDNL1E5RQL4 147 aa12.45□□□□□ -0.42
LIG1-218ENST00000599322 M0R082 166 aa12.45□□□□□ -0.42
LIG1-218ENST00000599322 GMNNO75496 209 aa12.45□□□□□ -0.42
LIG1-218ENST00000599322 MT-ATP6P00846 226 aa12.45□□□□□ -0.42
LIG1-218ENST00000599322 COX4I1P13073 169 aa12.45□□□□□ -0.42
LIG1-218ENST00000599322 ZNF83P51522 516 aa12.45□□□□□ -0.42
LIG1-218ENST00000599322 SH3BGRP55822 239 aaPredicted RBP12.45□□□□□ -0.42
LIG1-218ENST00000599322 CLDN17P56750 224 aa12.45□□□□□ -0.42
LIG1-218ENST00000599322 EGR4Q05215 589 aa12.45□□□□□ -0.42
LIG1-218ENST00000599322 BSPH1Q075Z2 132 aa12.45□□□□□ -0.42
LIG1-218ENST00000599322 ENTPD8Q5MY95 495 aa12.45□□□□□ -0.42
LIG1-218ENST00000599322 ADAM5Q6NVV9 412 aa12.45□□□□□ -0.42
LIG1-218ENST00000599322 PIAS4Q8N2W9 510 aaPredicted RBP12.45□□□□□ -0.42
LIG1-218ENST00000599322 ADPRHL1Q8NDY3 354 aa12.45□□□□□ -0.42
LIG1-218ENST00000599322 PIK3C3Q8NEB9 887 aa12.45□□□□□ -0.42
LIG1-218ENST00000599322 OR6T1Q8NGN1 323 aa12.45□□□□□ -0.42
LIG1-218ENST00000599322 ZNF417Q8TAU3 575 aa12.45□□□□□ -0.42
LIG1-218ENST00000599322 GTPBP3Q969Y2 492 aaKnown RBP12.45□□□□□ -0.42
LIG1-218ENST00000599322 RCN3Q96D15 328 aa12.45□□□□□ -0.42
LIG1-218ENST00000599322 TRMT61AQ96FX7 289 aaKnown RBP12.45□□□□□ -0.42
LIG1-218ENST00000599322 ZNF587Q96SQ5 575 aaPredicted RBP12.45□□□□□ -0.42
LIG1-218ENST00000599322 TMEM204Q9BSN7 226 aa12.45□□□□□ -0.42
LIG1-218ENST00000599322 POLR2J2Q9GZM3 115 aaKnown RBP12.45□□□□□ -0.42
LIG1-218ENST00000599322 POLR2J3Q9H1A7 115 aaKnown RBP12.45□□□□□ -0.42
LIG1-218ENST00000599322 FKRPQ9H9S5 495 aa12.45□□□□□ -0.42
LIG1-218ENST00000599322 OBP2BQ9NPH6 170 aa12.45□□□□□ -0.42
LIG1-218ENST00000599322 VPS13CQ709C8 3753 aa12.45□□□□□ -0.42
LIG1-218ENST00000599322 LOC102725191A0A1B0GVB3 256 aa12.44□□□□□ -0.42
LIG1-218ENST00000599322 FAM220BPB1ANY3 271 aa12.44□□□□□ -0.42
LIG1-218ENST00000599322 M0R1B8 84 aa12.44□□□□□ -0.42
LIG1-218ENST00000599322 AHCYP23526 432 aa12.44□□□□□ -0.42
LIG1-218ENST00000599322 EDNRAP25101 427 aa12.44□□□□□ -0.42
LIG1-218ENST00000599322 LOXP28300 417 aaPredicted RBP12.44□□□□□ -0.42
LIG1-218ENST00000599322 TAS2R41P59536 307 aa12.44□□□□□ -0.42
LIG1-218ENST00000599322 RPS4XP62701 263 aaKnown RBP12.44□□□□□ -0.42
LIG1-218ENST00000599322 NPTX1Q15818 432 aa12.44□□□□□ -0.42
LIG1-218ENST00000599322 LRRC23Q53EV4 343 aaPredicted RBP12.44□□□□□ -0.42
LIG1-218ENST00000599322 SLC22A25Q6T423 547 aa12.44□□□□□ -0.42
LIG1-218ENST00000599322 CARM1Q86X55 608 aa12.44□□□□□ -0.42
LIG1-218ENST00000599322 CALHM3Q86XJ0 350 aa12.44□□□□□ -0.42
LIG1-218ENST00000599322 EPHX4Q8IUS5 362 aa12.44□□□□□ -0.42
LIG1-218ENST00000599322 KDM8Q8N371 416 aa12.44□□□□□ -0.42
LIG1-218ENST00000599322 POU5F2Q8N7G0 328 aa12.44□□□□□ -0.42
LIG1-218ENST00000599322 ZIC4Q8N9L1 334 aa12.44□□□□□ -0.42
LIG1-218ENST00000599322 ADAMTS16Q8TE57 1224 aa12.44□□□□□ -0.42
LIG1-218ENST00000599322 TAMM41Q96BW9 452 aa12.44□□□□□ -0.42
LIG1-218ENST00000599322 PTDSS2Q9BVG9 487 aa12.44□□□□□ -0.42
LIG1-218ENST00000599322 LINC00470Q9BZP3 86 aa12.44□□□□□ -0.42
LIG1-218ENST00000599322 SLC19A3Q9BZV2 496 aa12.44□□□□□ -0.42
LIG1-218ENST00000599322 SLC17A5Q9NRA2 495 aa12.44□□□□□ -0.42
LIG1-218ENST00000599322 NOX1Q9Y5S8 564 aa12.44□□□□□ -0.42
LIG1-218ENST00000599322 NAV3Q8IVL0 2385 aa12.43□□□□□ -0.42
LIG1-218ENST00000599322 GMNCA6NCL1 334 aa12.43□□□□□ -0.42
LIG1-218ENST00000599322 DPRXA6NFQ7 191 aa12.43□□□□□ -0.42
LIG1-218ENST00000599322 FXYD1O00168 92 aa12.43□□□□□ -0.42
LIG1-218ENST00000599322 ABCD4O14678 606 aa12.43□□□□□ -0.42
LIG1-218ENST00000599322 PLAUP00749 431 aa12.43□□□□□ -0.42
LIG1-218ENST00000599322 ITGA5P08648 1049 aa12.43□□□□□ -0.42
LIG1-218ENST00000599322 UMPSP11172 480 aa12.43□□□□□ -0.42
LIG1-218ENST00000599322 BMP4P12644 408 aa12.43□□□□□ -0.42
LIG1-218ENST00000599322 HOXB1P14653 301 aaPredicted RBP12.43□□□□□ -0.42
LIG1-218ENST00000599322 KDELR2P33947 212 aa12.43□□□□□ -0.42
LIG1-218ENST00000599322 NTF4P34130 210 aa12.43□□□□□ -0.42
LIG1-218ENST00000599322 SELENOPP49908 381 aa12.43□□□□□ -0.42
LIG1-218ENST00000599322 GZMMP51124 257 aa12.43□□□□□ -0.42
LIG1-218ENST00000599322 PUDPQ08623 228 aa12.43□□□□□ -0.42
LIG1-218ENST00000599322 ZNF672Q499Z4 452 aaPredicted RBP12.43□□□□□ -0.42
LIG1-218ENST00000599322 DEF8Q6ZN54 512 aa12.43□□□□□ -0.42
LIG1-218ENST00000599322 COMTD1Q86VU5 262 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms