RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 CCNIQ14094 377 aa12.09□□□□□ -0.47
SCAF1-203ENST00000598359 GABRA6Q16445 453 aa12.09□□□□□ -0.47
SCAF1-203ENST00000598359 PGGHGQ32M88 737 aa12.09□□□□□ -0.47
SCAF1-203ENST00000598359 SWT1Q5T5J6 900 aaKnown RBP12.09□□□□□ -0.47
SCAF1-203ENST00000598359 PRAMEF8Q5VWM4 474 aa12.09□□□□□ -0.47
SCAF1-203ENST00000598359 PRAMEF7Q5VXH5 474 aa12.09□□□□□ -0.47
SCAF1-203ENST00000598359 CLEC9AQ6UXN8 241 aa12.09□□□□□ -0.47
SCAF1-203ENST00000598359 DLEU7Q6UYE1 221 aa12.09□□□□□ -0.47
SCAF1-203ENST00000598359 BIVMQ86UB2 503 aa12.09□□□□□ -0.47
SCAF1-203ENST00000598359 KDM8Q8N371 416 aa12.09□□□□□ -0.47
SCAF1-203ENST00000598359 SMAP2Q8WU79 429 aaPredicted RBP12.09□□□□□ -0.47
SCAF1-203ENST00000598359 SLC25A36Q96CQ1 311 aa12.09□□□□□ -0.47
SCAF1-203ENST00000598359 COX4I2Q96KJ9 171 aa12.09□□□□□ -0.47
SCAF1-203ENST00000598359 USB1Q9BQ65 265 aaKnown RBP12.09□□□□□ -0.47
SCAF1-203ENST00000598359 WFDC6Q9BQY6 131 aa12.09□□□□□ -0.47
SCAF1-203ENST00000598359 CPPED1Q9BRF8 314 aaPredicted RBP12.09□□□□□ -0.47
SCAF1-203ENST00000598359 CXorf56Q9H5V9 222 aa12.09□□□□□ -0.47
SCAF1-203ENST00000598359 ARMC7Q9H6L4 198 aa12.09□□□□□ -0.47
SCAF1-203ENST00000598359 ZNF701Q9NV72 531 aaPredicted RBP12.09□□□□□ -0.47
SCAF1-203ENST00000598359 TAS2R16Q9NYV7 291 aa12.09□□□□□ -0.47
SCAF1-203ENST00000598359 UPB1Q9UBR1 384 aa12.09□□□□□ -0.47
SCAF1-203ENST00000598359 SEC14L4Q9UDX3 406 aa12.09□□□□□ -0.47
SCAF1-203ENST00000598359 NDUFAF1Q9Y375 327 aa12.09□□□□□ -0.47
SCAF1-203ENST00000598359 SLC25A15Q9Y619 301 aa12.09□□□□□ -0.47
SCAF1-203ENST00000598359 A0A1W2PP18 115 aa12.08□□□□□ -0.48
SCAF1-203ENST00000598359 PDLIM1O00151 329 aa12.08□□□□□ -0.48
SCAF1-203ENST00000598359 MRASO14807 208 aa12.08□□□□□ -0.48
SCAF1-203ENST00000598359 NPIPB7O75200 414 aa12.08□□□□□ -0.48
SCAF1-203ENST00000598359 PDE5AO76074 875 aa12.08□□□□□ -0.48
SCAF1-203ENST00000598359 LY6G6DO95868 133 aa12.08□□□□□ -0.48
SCAF1-203ENST00000598359 RPS5P46782 204 aaKnown RBP12.08□□□□□ -0.48
SCAF1-203ENST00000598359 CDH11P55287 796 aa12.08□□□□□ -0.48
SCAF1-203ENST00000598359 PSME3P61289 254 aa12.08□□□□□ -0.48
SCAF1-203ENST00000598359 EGR4Q05215 589 aa12.08□□□□□ -0.48
SCAF1-203ENST00000598359 SCARB2Q14108 478 aa12.08□□□□□ -0.48
SCAF1-203ENST00000598359 SELPLGQ14242 412 aa12.08□□□□□ -0.48
SCAF1-203ENST00000598359 ADRM1Q16186 407 aa12.08□□□□□ -0.48
SCAF1-203ENST00000598359 ZSWIM7Q19AV6 140 aa12.08□□□□□ -0.48
SCAF1-203ENST00000598359 SPATS1Q496A3 300 aa12.08□□□□□ -0.48
SCAF1-203ENST00000598359 TMEM225Q6GV28 225 aa12.08□□□□□ -0.48
SCAF1-203ENST00000598359 REEP3Q6NUK4 255 aa12.08□□□□□ -0.48
SCAF1-203ENST00000598359 PRSS57Q6UWY2 283 aa12.08□□□□□ -0.48
SCAF1-203ENST00000598359 AAED1Q7RTV5 226 aa12.08□□□□□ -0.48
SCAF1-203ENST00000598359 RETREG3Q86VR2 466 aa12.08□□□□□ -0.48
SCAF1-203ENST00000598359 P2RY8Q86VZ1 359 aa12.08□□□□□ -0.48
SCAF1-203ENST00000598359 PIAS4Q8N2W9 510 aaPredicted RBP12.08□□□□□ -0.48
SCAF1-203ENST00000598359 WDR31Q8NA23 367 aa12.08□□□□□ -0.48
SCAF1-203ENST00000598359 PCYOX1LQ8NBM8 494 aa12.08□□□□□ -0.48
SCAF1-203ENST00000598359 KTI12Q96EK9 354 aaPredicted RBP12.08□□□□□ -0.48
SCAF1-203ENST00000598359 PTDSS2Q9BVG9 487 aa12.08□□□□□ -0.48
SCAF1-203ENST00000598359 TAPBPLQ9BX59 468 aa12.08□□□□□ -0.48
SCAF1-203ENST00000598359 PARPBPQ9NWS1 579 aa12.08□□□□□ -0.48
SCAF1-203ENST00000598359 CISD1Q9NZ45 108 aaKnown RBP12.08□□□□□ -0.48
SCAF1-203ENST00000598359 COL6A5A8TX70 2615 aa12.08□□□□□ -0.48
SCAF1-203ENST00000598359 CADP27708 2225 aa12.07□□□□□ -0.48
SCAF1-203ENST00000598359 ZANQ9Y493 2812 aa12.07□□□□□ -0.48
SCAF1-203ENST00000598359 A0A1B0GWA3 101 aa12.07□□□□□ -0.48
SCAF1-203ENST00000598359 ELOA3DA6NLF2 546 aaPredicted RBP12.07□□□□□ -0.48
SCAF1-203ENST00000598359 FTCDNL1E5RQL4 147 aa12.07□□□□□ -0.48
SCAF1-203ENST00000598359 M0R1B8 84 aa12.07□□□□□ -0.48
SCAF1-203ENST00000598359 NDUFS7O75251 213 aa12.07□□□□□ -0.48
SCAF1-203ENST00000598359 CD8AP01732 235 aa12.07□□□□□ -0.48
SCAF1-203ENST00000598359 ETS2P15036 469 aa12.07□□□□□ -0.48
SCAF1-203ENST00000598359 PAX1P15863 534 aa12.07□□□□□ -0.48
SCAF1-203ENST00000598359 CBLP22681 906 aa12.07□□□□□ -0.48
SCAF1-203ENST00000598359 PPIBP23284 216 aaKnown RBP12.07□□□□□ -0.48
SCAF1-203ENST00000598359 PRKAR1BP31321 381 aa12.07□□□□□ -0.48
SCAF1-203ENST00000598359 SELENOPP49908 381 aa12.07□□□□□ -0.48
SCAF1-203ENST00000598359 MTPNP58546 118 aa12.07□□□□□ -0.48
SCAF1-203ENST00000598359 ELOA3BQ3SY89 546 aa12.07□□□□□ -0.48
SCAF1-203ENST00000598359 HIKESHIQ53FT3 197 aa12.07□□□□□ -0.48
SCAF1-203ENST00000598359 RUNDC3AQ59EK9 446 aa12.07□□□□□ -0.48
SCAF1-203ENST00000598359 DHDDSQ86SQ9 333 aa12.07□□□□□ -0.48
SCAF1-203ENST00000598359 ELOA3Q8NG57 546 aa12.07□□□□□ -0.48
SCAF1-203ENST00000598359 RNF217Q8TC41 542 aa12.07□□□□□ -0.48
SCAF1-203ENST00000598359 STK35Q8TDR2 534 aa12.07□□□□□ -0.48
SCAF1-203ENST00000598359 GTPBP3Q969Y2 492 aaKnown RBP12.07□□□□□ -0.48
SCAF1-203ENST00000598359 TMEM45BQ96B21 275 aa12.07□□□□□ -0.48
SCAF1-203ENST00000598359 MUS81Q96NY9 551 aa12.07□□□□□ -0.48
SCAF1-203ENST00000598359 CDRT15Q96T59 188 aa12.07□□□□□ -0.48
SCAF1-203ENST00000598359 S100A14Q9HCY8 104 aa12.07□□□□□ -0.48
SCAF1-203ENST00000598359 ABCD2Q9UBJ2 740 aa12.07□□□□□ -0.48
SCAF1-203ENST00000598359 RPS6KB2Q9UBS0 482 aa12.07□□□□□ -0.48
SCAF1-203ENST00000598359 FN1P02751 2386 aaKnown RBP12.07□□□□□ -0.48
SCAF1-203ENST00000598359 IGKV1D-42A0A075B6H8 117 aa12.06□□□□□ -0.48
SCAF1-203ENST00000598359 EVPLLA8MZ36 301 aa12.06□□□□□ -0.48
SCAF1-203ENST00000598359 OVOL3O00110 214 aa12.06□□□□□ -0.48
SCAF1-203ENST00000598359 ACOT8O14734 319 aa12.06□□□□□ -0.48
SCAF1-203ENST00000598359 AHSA1O95433 338 aa12.06□□□□□ -0.48
SCAF1-203ENST00000598359 OPN1SWP03999 348 aa12.06□□□□□ -0.48
SCAF1-203ENST00000598359 PNMTP11086 282 aa12.06□□□□□ -0.48
SCAF1-203ENST00000598359 ANPEPP15144 967 aa12.06□□□□□ -0.48
SCAF1-203ENST00000598359 GPX2P18283 190 aa12.06□□□□□ -0.48
SCAF1-203ENST00000598359 SLC6A2P23975 617 aa12.06□□□□□ -0.48
SCAF1-203ENST00000598359 CD40P25942 277 aa12.06□□□□□ -0.48
SCAF1-203ENST00000598359 VHLP40337 213 aa12.06□□□□□ -0.48
SCAF1-203ENST00000598359 PTDSS1P48651 473 aaKnown RBP12.06□□□□□ -0.48
SCAF1-203ENST00000598359 MMEL1Q495T6 779 aa12.06□□□□□ -0.48
SCAF1-203ENST00000598359 NIPAL3Q6P499 406 aa12.06□□□□□ -0.48
SCAF1-203ENST00000598359 DHRS4L2Q6PKH6 230 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms