RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 GRK5P34947 590 aa13.14□□□□□ -0.31
VRK3-212ENST00000596814 SUCLG1P53597 346 aaKnown RBP13.14□□□□□ -0.31
VRK3-212ENST00000596814 CLDN18P56856 261 aa13.14□□□□□ -0.31
VRK3-212ENST00000596814 MYBPC1Q00872 1141 aa13.14□□□□□ -0.31
VRK3-212ENST00000596814 PUDPQ08623 228 aa13.14□□□□□ -0.31
VRK3-212ENST00000596814 PDSS1Q5T2R2 415 aa13.14□□□□□ -0.31
VRK3-212ENST00000596814 PAQR6Q6TCH4 344 aa13.14□□□□□ -0.31
VRK3-212ENST00000596814 SIAH3Q8IW03 269 aa13.14□□□□□ -0.31
VRK3-212ENST00000596814 ENTHD1Q8IYW4 607 aa13.14□□□□□ -0.31
VRK3-212ENST00000596814 LNX2Q8N448 690 aa13.14□□□□□ -0.31
VRK3-212ENST00000596814 MEIOBQ8N635 442 aa13.14□□□□□ -0.31
VRK3-212ENST00000596814 ZHX1-C8orf76Q96EF9 292 aa13.14□□□□□ -0.31
VRK3-212ENST00000596814 KATNB1Q9BVA0 655 aa13.14□□□□□ -0.31
VRK3-212ENST00000596814 TAS2R5Q9NYW4 299 aa13.14□□□□□ -0.31
VRK3-212ENST00000596814 UBAP1Q9NZ09 502 aa13.14□□□□□ -0.31
VRK3-212ENST00000596814 SPRR3Q9UBC9 169 aa13.14□□□□□ -0.31
VRK3-212ENST00000596814 RNF6Q9Y252 685 aa13.14□□□□□ -0.31
VRK3-212ENST00000596814 A0A1W2PNV4 684 aa13.13□□□□□ -0.31
VRK3-212ENST00000596814 NPIPA5E9PKD4 350 aa13.13□□□□□ -0.31
VRK3-212ENST00000596814 EIF1BO60739 113 aaKnown RBP13.13□□□□□ -0.31
VRK3-212ENST00000596814 CRYABP02511 175 aaKnown RBP13.13□□□□□ -0.31
VRK3-212ENST00000596814 HMGN1P05114 100 aa13.13□□□□□ -0.31
VRK3-212ENST00000596814 F13BP05160 661 aa13.13□□□□□ -0.31
VRK3-212ENST00000596814 CD14P08571 375 aa13.13□□□□□ -0.31
VRK3-212ENST00000596814 AHCYP23526 432 aa13.13□□□□□ -0.31
VRK3-212ENST00000596814 NOS3P29474 1203 aa13.13□□□□□ -0.31
VRK3-212ENST00000596814 EIF1AXP47813 144 aaKnown RBP13.13□□□□□ -0.31
VRK3-212ENST00000596814 PCYT1AP49585 367 aa13.13□□□□□ -0.31
VRK3-212ENST00000596814 CTXN1P60606 82 aa13.13□□□□□ -0.31
VRK3-212ENST00000596814 RAC3P60763 192 aa13.13□□□□□ -0.31
VRK3-212ENST00000596814 ISL1P61371 349 aa13.13□□□□□ -0.31
VRK3-212ENST00000596814 CD47Q08722 323 aa13.13□□□□□ -0.31
VRK3-212ENST00000596814 MAD2L1BPQ15013 274 aaPredicted RBP13.13□□□□□ -0.31
VRK3-212ENST00000596814 SNAPC1Q16533 368 aa13.13□□□□□ -0.31
VRK3-212ENST00000596814 BCL2A1Q16548 175 aa13.13□□□□□ -0.31
VRK3-212ENST00000596814 VASNQ6EMK4 673 aa13.13□□□□□ -0.31
VRK3-212ENST00000596814 ARHGAP11AQ6P4F7 1023 aa13.13□□□□□ -0.31
VRK3-212ENST00000596814 TMEM99Q8N816 258 aa13.13□□□□□ -0.31
VRK3-212ENST00000596814 OR10D3Q8NH80 312 aa13.13□□□□□ -0.31
VRK3-212ENST00000596814 ERMAPQ96PL5 475 aaPredicted RBP13.13□□□□□ -0.31
VRK3-212ENST00000596814 POLDIP3Q9BY77 421 aaKnown RBP13.13□□□□□ -0.31
VRK3-212ENST00000596814 SRXN1Q9BYN0 137 aa13.13□□□□□ -0.31
VRK3-212ENST00000596814 NRIP3Q9NQ35 241 aa13.13□□□□□ -0.31
VRK3-212ENST00000596814 INIPQ9NRY2 104 aa13.13□□□□□ -0.31
VRK3-212ENST00000596814 NPIPA1Q9UND3 350 aa13.13□□□□□ -0.31
VRK3-212ENST00000596814 ADAM18Q9Y3Q7 739 aa13.13□□□□□ -0.31
VRK3-212ENST00000596814 PCDHGB5Q9Y5G0 923 aa13.13□□□□□ -0.31
VRK3-212ENST00000596814 ACACBO00763 2458 aa13.13□□□□□ -0.31
VRK3-212ENST00000596814 AQP7P3A6NL99 342 aa13.13□□□□□ -0.31
VRK3-212ENST00000596814 SURF4O15260 269 aa13.13□□□□□ -0.31
VRK3-212ENST00000596814 CXCL13O43927 109 aa13.13□□□□□ -0.31
VRK3-212ENST00000596814 MPZL2O60487 215 aa13.13□□□□□ -0.31
VRK3-212ENST00000596814 MLLT10P55197 1068 aa13.13□□□□□ -0.31
VRK3-212ENST00000596814 CLDN15P56746 228 aa13.13□□□□□ -0.31
VRK3-212ENST00000596814 CARD18P57730 90 aa13.13□□□□□ -0.31
VRK3-212ENST00000596814 ERVK-25P63136 954 aa13.13□□□□□ -0.31
VRK3-212ENST00000596814 SRYQ05066 204 aa13.13□□□□□ -0.31
VRK3-212ENST00000596814 ZP4Q12836 540 aa13.13□□□□□ -0.31
VRK3-212ENST00000596814 ZNF239Q16600 458 aaKnown RBP13.13□□□□□ -0.31
VRK3-212ENST00000596814 FAM180AQ6UWF9 173 aa13.13□□□□□ -0.31
VRK3-212ENST00000596814 PTCHD4Q6ZW05 846 aa13.13□□□□□ -0.31
VRK3-212ENST00000596814 UBE2FQ969M7 185 aa13.13□□□□□ -0.31
VRK3-212ENST00000596814 PLEKHA8Q96JA3 519 aa13.13□□□□□ -0.31
VRK3-212ENST00000596814 NAA11Q9BSU3 229 aaPredicted RBP13.13□□□□□ -0.31
VRK3-212ENST00000596814 TIGARQ9NQ88 270 aa13.13□□□□□ -0.31
VRK3-212ENST00000596814 RASSF1Q9NS23 344 aa13.13□□□□□ -0.31
VRK3-212ENST00000596814 PNPLA3Q9NST1 481 aa13.13□□□□□ -0.31
VRK3-212ENST00000596814 ZNF226Q9NYT6 803 aa13.13□□□□□ -0.31
VRK3-212ENST00000596814 IER3IP1Q9Y5U9 82 aa13.13□□□□□ -0.31
VRK3-212ENST00000596814 A0A1B0GVC2 190 aa13.12□□□□□ -0.31
VRK3-212ENST00000596814 MS4A18H0YCH9 400 aa13.12□□□□□ -0.31
VRK3-212ENST00000596814 ARPC3O15145 178 aa13.12□□□□□ -0.31
VRK3-212ENST00000596814 PRKYO43930 277 aa13.12□□□□□ -0.31
VRK3-212ENST00000596814 SERPINI2O75830 405 aa13.12□□□□□ -0.31
VRK3-212ENST00000596814 APEHP13798 732 aaKnown RBP13.12□□□□□ -0.31
VRK3-212ENST00000596814 P2RY4P51582 365 aa13.12□□□□□ -0.31
VRK3-212ENST00000596814 RPS3AP61247 264 aaKnown RBP13.12□□□□□ -0.31
VRK3-212ENST00000596814 FOXK2Q01167 660 aa13.12□□□□□ -0.31
VRK3-212ENST00000596814 TOP3AQ13472 1001 aaPredicted RBP13.12□□□□□ -0.31
VRK3-212ENST00000596814 MS4A18Q3C1V0 323 aa13.12□□□□□ -0.31
VRK3-212ENST00000596814 SLC35F1Q5T1Q4 408 aa13.12□□□□□ -0.31
VRK3-212ENST00000596814 C19orf48Q6RUI8 117 aa13.12□□□□□ -0.31
VRK3-212ENST00000596814 FAM122BQ7Z309 247 aa13.12□□□□□ -0.31
VRK3-212ENST00000596814 TCEANCQ8N8B7 351 aa13.12□□□□□ -0.31
VRK3-212ENST00000596814 Q8NA96 180 aa13.12□□□□□ -0.31
VRK3-212ENST00000596814 ANKK1Q8NFD2 765 aa13.12□□□□□ -0.31
VRK3-212ENST00000596814 OR8J1Q8NGP2 316 aa13.12□□□□□ -0.31
VRK3-212ENST00000596814 CNIH3Q8TBE1 160 aa13.12□□□□□ -0.31
VRK3-212ENST00000596814 FBLIM1Q8WUP2 373 aa13.12□□□□□ -0.31
VRK3-212ENST00000596814 TRUB1Q8WWH5 349 aaKnown RBP13.12□□□□□ -0.31
VRK3-212ENST00000596814 CPNE4Q96A23 557 aaPredicted RBP13.12□□□□□ -0.31
VRK3-212ENST00000596814 IL4I1Q96RQ9 567 aa13.12□□□□□ -0.31
VRK3-212ENST00000596814 FANCFQ9NPI8 374 aa13.12□□□□□ -0.31
VRK3-212ENST00000596814 PLSCR2Q9NRY7 297 aa13.12□□□□□ -0.31
VRK3-212ENST00000596814 ATMQ13315 3056 aa13.12□□□□□ -0.31
VRK3-212ENST00000596814 PIEZO2Q9H5I5 2752 aa13.12□□□□□ -0.31
VRK3-212ENST00000596814 IGHV3-15A0A0B4J1V0 119 aa13.11□□□□□ -0.31
VRK3-212ENST00000596814 RIIAD1A6NNX1 92 aa13.11□□□□□ -0.31
VRK3-212ENST00000596814 ZNF814B7Z6K7 855 aa13.11□□□□□ -0.31
VRK3-212ENST00000596814 AQP7O14520 342 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms