RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 TPK1Q9H3S4 243 aa11.88□□□□□ -0.51
SHKBP1-208ENST00000595726 RMND5AQ9H871 391 aa11.88□□□□□ -0.51
SHKBP1-208ENST00000595726 SEC61A2Q9H9S3 476 aa11.88□□□□□ -0.51
SHKBP1-208ENST00000595726 DCTN4Q9UJW0 460 aa11.88□□□□□ -0.51
SHKBP1-208ENST00000595726 PPIAL4AQ9Y536 164 aa11.88□□□□□ -0.51
SHKBP1-208ENST00000595726 ETV2O00321 342 aaPredicted RBP11.87□□□□□ -0.51
SHKBP1-208ENST00000595726 GPR171O14626 319 aa11.87□□□□□ -0.51
SHKBP1-208ENST00000595726 DNAJA2O60884 412 aa11.87□□□□□ -0.51
SHKBP1-208ENST00000595726 BCAS1O75363 584 aaPredicted RBP11.87□□□□□ -0.51
SHKBP1-208ENST00000595726 WNT11O96014 354 aa11.87□□□□□ -0.51
SHKBP1-208ENST00000595726 CSTAP01040 98 aa11.87□□□□□ -0.51
SHKBP1-208ENST00000595726 CRYAAP02489 173 aa11.87□□□□□ -0.51
SHKBP1-208ENST00000595726 CHRM4P08173 479 aa11.87□□□□□ -0.51
SHKBP1-208ENST00000595726 ADRA2AP08913 450 aa11.87□□□□□ -0.51
SHKBP1-208ENST00000595726 ZCCHC18P0CG32 403 aa11.87□□□□□ -0.51
SHKBP1-208ENST00000595726 TFPIP10646 304 aa11.87□□□□□ -0.51
SHKBP1-208ENST00000595726 ADRA2CP18825 462 aa11.87□□□□□ -0.51
SHKBP1-208ENST00000595726 CALCRP30988 508 aa11.87□□□□□ -0.51
SHKBP1-208ENST00000595726 THBS4P35443 961 aa11.87□□□□□ -0.51
SHKBP1-208ENST00000595726 PGM1P36871 562 aa11.87□□□□□ -0.51
SHKBP1-208ENST00000595726 SLC1A3P43003 542 aa11.87□□□□□ -0.51
SHKBP1-208ENST00000595726 ANXA11P50995 505 aaKnown RBP11.87□□□□□ -0.51
SHKBP1-208ENST00000595726 STX1BP61266 288 aa11.87□□□□□ -0.51
SHKBP1-208ENST00000595726 CSNK2A1P68400 391 aaPredicted RBP11.87□□□□□ -0.51
SHKBP1-208ENST00000595726 PLAURQ03405 335 aa11.87□□□□□ -0.51
SHKBP1-208ENST00000595726 HGFACQ04756 655 aa11.87□□□□□ -0.51
SHKBP1-208ENST00000595726 MERTKQ12866 999 aa11.87□□□□□ -0.51
SHKBP1-208ENST00000595726 CBFBQ13951 182 aa11.87□□□□□ -0.51
SHKBP1-208ENST00000595726 SYPL1Q16563 259 aa11.87□□□□□ -0.51
SHKBP1-208ENST00000595726 ANKRD16Q6P6B7 361 aa11.87□□□□□ -0.51
SHKBP1-208ENST00000595726 EIF3MQ7L2H7 374 aaKnown RBP11.87□□□□□ -0.51
SHKBP1-208ENST00000595726 SPATA21Q7Z572 469 aa11.87□□□□□ -0.51
SHKBP1-208ENST00000595726 HMGN2P46Q86SG4 172 aa11.87□□□□□ -0.51
SHKBP1-208ENST00000595726 ANKFN1Q8N957 763 aa11.87□□□□□ -0.51
SHKBP1-208ENST00000595726 C1orf162Q8NEQ5 155 aaPredicted RBP11.87□□□□□ -0.51
SHKBP1-208ENST00000595726 ZG16BQ96DA0 208 aa11.87□□□□□ -0.51
SHKBP1-208ENST00000595726 ITCHQ96J02 903 aa11.87□□□□□ -0.51
SHKBP1-208ENST00000595726 DUX5Q96PT3 197 aa11.87□□□□□ -0.51
SHKBP1-208ENST00000595726 TRNT1Q96Q11 434 aaKnown RBP11.87□□□□□ -0.51
SHKBP1-208ENST00000595726 SLC38A2Q96QD8 506 aa11.87□□□□□ -0.51
SHKBP1-208ENST00000595726 THUMPD3Q9BV44 507 aaKnown RBP11.87□□□□□ -0.51
SHKBP1-208ENST00000595726 SUCNR1Q9BXA5 334 aa11.87□□□□□ -0.51
SHKBP1-208ENST00000595726 LAT2Q9GZY6 243 aa11.87□□□□□ -0.51
SHKBP1-208ENST00000595726 SLC38A1Q9H2H9 487 aa11.87□□□□□ -0.51
SHKBP1-208ENST00000595726 NR5A2O00482 541 aa11.86□□□□□ -0.51
SHKBP1-208ENST00000595726 CYP7B1O75881 506 aa11.86□□□□□ -0.51
SHKBP1-208ENST00000595726 PDE5AO76074 875 aa11.86□□□□□ -0.51
SHKBP1-208ENST00000595726 ANP32DO95626 131 aa11.86□□□□□ -0.51
SHKBP1-208ENST00000595726 KRT75O95678 551 aa11.86□□□□□ -0.51
SHKBP1-208ENST00000595726 ERCC1P07992 297 aaPredicted RBP11.86□□□□□ -0.51
SHKBP1-208ENST00000595726 UBTFL6P0CB48 400 aaPredicted RBP11.86□□□□□ -0.51
SHKBP1-208ENST00000595726 HOXB9P17482 250 aaPredicted RBP11.86□□□□□ -0.51
SHKBP1-208ENST00000595726 COL8A2P25067 703 aa11.86□□□□□ -0.51
SHKBP1-208ENST00000595726 SESN3P58005 492 aa11.86□□□□□ -0.51
SHKBP1-208ENST00000595726 TUBA1BP68363 451 aa11.86□□□□□ -0.51
SHKBP1-208ENST00000595726 TUBA4AP68366 448 aa11.86□□□□□ -0.51
SHKBP1-208ENST00000595726 NAAAQ02083 359 aa11.86□□□□□ -0.51
SHKBP1-208ENST00000595726 TGFBR3Q03167 851 aa11.86□□□□□ -0.51
SHKBP1-208ENST00000595726 SYT14P1Q58G82 188 aa11.86□□□□□ -0.51
SHKBP1-208ENST00000595726 C6orf10Q5SRN2 563 aa11.86□□□□□ -0.51
SHKBP1-208ENST00000595726 SLC2A7Q6PXP3 512 aa11.86□□□□□ -0.51
SHKBP1-208ENST00000595726 KLHL24Q6TFL4 600 aa11.86□□□□□ -0.51
SHKBP1-208ENST00000595726 LRRC74BQ6ZQY2 392 aa11.86□□□□□ -0.51
SHKBP1-208ENST00000595726 TUBA1AQ71U36 451 aa11.86□□□□□ -0.51
SHKBP1-208ENST00000595726 FUNDC1Q8IVP5 155 aa11.86□□□□□ -0.51
SHKBP1-208ENST00000595726 CDK20Q8IZL9 346 aa11.86□□□□□ -0.51
SHKBP1-208ENST00000595726 STON2Q8WXE9 905 aa11.86□□□□□ -0.51
SHKBP1-208ENST00000595726 GTF2H4Q92759 462 aa11.86□□□□□ -0.51
SHKBP1-208ENST00000595726 AURKBQ96GD4 344 aaPredicted RBP11.86□□□□□ -0.51
SHKBP1-208ENST00000595726 ARL5BQ96KC2 179 aa11.86□□□□□ -0.51
SHKBP1-208ENST00000595726 KATNB1Q9BVA0 655 aa11.86□□□□□ -0.51
SHKBP1-208ENST00000595726 UNKLQ9H9P5 680 aaKnown RBP11.86□□□□□ -0.51
SHKBP1-208ENST00000595726 TPT1P8Q9HAU6 139 aa11.86□□□□□ -0.51
SHKBP1-208ENST00000595726 DYNLRB1Q9NP97 96 aa11.86□□□□□ -0.51
SHKBP1-208ENST00000595726 SERINC1Q9NRX5 453 aa11.86□□□□□ -0.51
SHKBP1-208ENST00000595726 ZNF446Q9NWS9 450 aa11.86□□□□□ -0.51
SHKBP1-208ENST00000595726 SLC35A3Q9Y2D2 325 aa11.86□□□□□ -0.51
SHKBP1-208ENST00000595726 CLDN24A6NM45 220 aa11.85□□□□□ -0.51
SHKBP1-208ENST00000595726 BCL10O95999 233 aa11.85□□□□□ -0.51
SHKBP1-208ENST00000595726 PNPP00491 289 aa11.85□□□□□ -0.51
SHKBP1-208ENST00000595726 CECR9P0C854 216 aa11.85□□□□□ -0.51
SHKBP1-208ENST00000595726 GAAP10253 952 aa11.85□□□□□ -0.51
SHKBP1-208ENST00000595726 ETFAP13804 333 aa11.85□□□□□ -0.51
SHKBP1-208ENST00000595726 RPS4Y1P22090 263 aaKnown RBP11.85□□□□□ -0.51
SHKBP1-208ENST00000595726 MPGP29372 298 aa11.85□□□□□ -0.51
SHKBP1-208ENST00000595726 MAGEA8P43361 318 aa11.85□□□□□ -0.51
SHKBP1-208ENST00000595726 SLC16A1P53985 500 aa11.85□□□□□ -0.51
SHKBP1-208ENST00000595726 LMO4P61968 165 aa11.85□□□□□ -0.51
SHKBP1-208ENST00000595726 MAPK11Q15759 364 aa11.85□□□□□ -0.51
SHKBP1-208ENST00000595726 ELFN2Q5R3F8 820 aa11.85□□□□□ -0.51
SHKBP1-208ENST00000595726 OR51F2Q8NH61 342 aa11.85□□□□□ -0.51
SHKBP1-208ENST00000595726 ST8SIA1Q92185 356 aa11.85□□□□□ -0.51
SHKBP1-208ENST00000595726 OR11A1Q9GZK7 315 aa11.85□□□□□ -0.51
SHKBP1-208ENST00000595726 PAIP1Q9H074 479 aaKnown RBP11.85□□□□□ -0.51
SHKBP1-208ENST00000595726 RACGAP1Q9H0H5 632 aa11.85□□□□□ -0.51
SHKBP1-208ENST00000595726 EXOSC3Q9NQT5 275 aaKnown RBP11.85□□□□□ -0.51
SHKBP1-208ENST00000595726 DDX28Q9NUL7 540 aaKnown RBP11.85□□□□□ -0.51
SHKBP1-208ENST00000595726 CCDC167Q9P0B6 97 aa11.85□□□□□ -0.51
SHKBP1-208ENST00000595726 P2RX2Q9UBL9 471 aa11.85□□□□□ -0.51
SHKBP1-208ENST00000595726 DSPPQ9NZW4 1301 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms