RNA–Protein interactions for RNA: ENST00000592839.6

SF3A2-207, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-207ENST00000592839 TRMT5Q32P41 509 aaKnown RBP13.02□□□□□ -0.33
SF3A2-207ENST00000592839 ELOA3BQ3SY89 546 aa13.02□□□□□ -0.33
SF3A2-207ENST00000592839 TMEM225Q6GV28 225 aa13.02□□□□□ -0.33
SF3A2-207ENST00000592839 ZNF544Q6NX49 715 aa13.02□□□□□ -0.33
SF3A2-207ENST00000592839 ZNF627Q7L945 461 aa13.02□□□□□ -0.33
SF3A2-207ENST00000592839 PATL1Q86TB9 770 aaKnown RBP13.02□□□□□ -0.33
SF3A2-207ENST00000592839 CALHM3Q86XJ0 350 aa13.02□□□□□ -0.33
SF3A2-207ENST00000592839 ARMC8Q8IUR7 673 aa13.02□□□□□ -0.33
SF3A2-207ENST00000592839 ELOA3Q8NG57 546 aa13.02□□□□□ -0.33
SF3A2-207ENST00000592839 GPR32P1Q8NGA4 272 aa13.02□□□□□ -0.33
SF3A2-207ENST00000592839 OR8J3Q8NGG0 315 aa13.02□□□□□ -0.33
SF3A2-207ENST00000592839 Q96MF0 132 aa13.02□□□□□ -0.33
SF3A2-207ENST00000592839 OXGR1Q96P68 337 aa13.02□□□□□ -0.33
SF3A2-207ENST00000592839 NELFAQ9H3P2 528 aa13.02□□□□□ -0.33
SF3A2-207ENST00000592839 ADPRHL2Q9NX46 363 aa13.02□□□□□ -0.33
SF3A2-207ENST00000592839 CISD1Q9NZ45 108 aaKnown RBP13.02□□□□□ -0.33
SF3A2-207ENST00000592839 UPB1Q9UBR1 384 aa13.02□□□□□ -0.33
SF3A2-207ENST00000592839 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.02□□□□□ -0.33
SF3A2-207ENST00000592839 LAMP3Q9UQV4 416 aa13.02□□□□□ -0.33
SF3A2-207ENST00000592839 ARFGEF3Q5TH69 2177 aa13.02□□□□□ -0.33
SF3A2-207ENST00000592839 ANK3Q12955 4377 aaKnown RBP13.02□□□□□ -0.33
SF3A2-207ENST00000592839 FBP2O00757 339 aa13.01□□□□□ -0.33
SF3A2-207ENST00000592839 CLOCKO15516 846 aa13.01□□□□□ -0.33
SF3A2-207ENST00000592839 TRAF3IP2O43734 574 aaPredicted RBP13.01□□□□□ -0.33
SF3A2-207ENST00000592839 CHP2O43745 196 aa13.01□□□□□ -0.33
SF3A2-207ENST00000592839 IGF2P01344 180 aa13.01□□□□□ -0.33
SF3A2-207ENST00000592839 SELENOPP49908 381 aa13.01□□□□□ -0.33
SF3A2-207ENST00000592839 RGS8P57771 180 aaPredicted RBP13.01□□□□□ -0.33
SF3A2-207ENST00000592839 HOXC5Q00444 222 aa13.01□□□□□ -0.33
SF3A2-207ENST00000592839 VEZF1Q14119 521 aa13.01□□□□□ -0.33
SF3A2-207ENST00000592839 SELPLGQ14242 412 aa13.01□□□□□ -0.33
SF3A2-207ENST00000592839 DUSP7Q16829 419 aa13.01□□□□□ -0.33
SF3A2-207ENST00000592839 CGB2Q6NT52 195 aa13.01□□□□□ -0.33
SF3A2-207ENST00000592839 RANBP3LQ86VV4 465 aaPredicted RBP13.01□□□□□ -0.33
SF3A2-207ENST00000592839 TMEM123Q8N131 208 aa13.01□□□□□ -0.33
SF3A2-207ENST00000592839 RASSF5Q8WWW0 418 aa13.01□□□□□ -0.33
SF3A2-207ENST00000592839 NEUROG1Q92886 237 aa13.01□□□□□ -0.33
SF3A2-207ENST00000592839 TAAR8Q969N4 342 aa13.01□□□□□ -0.33
SF3A2-207ENST00000592839 DNAJA3Q96EY1 480 aa13.01□□□□□ -0.33
SF3A2-207ENST00000592839 EPYCQ99645 322 aa13.01□□□□□ -0.33
SF3A2-207ENST00000592839 DHRS9Q9BPW9 319 aa13.01□□□□□ -0.33
SF3A2-207ENST00000592839 WFDC6Q9BQY6 131 aa13.01□□□□□ -0.33
SF3A2-207ENST00000592839 ZNF446Q9NWS9 450 aa13.01□□□□□ -0.33
SF3A2-207ENST00000592839 MRPL39Q9NYK5 338 aaKnown RBP13.01□□□□□ -0.33
SF3A2-207ENST00000592839 A0A0G2JND7 137 aa13□□□□□ -0.33
SF3A2-207ENST00000592839 CCT8L1PA6NM43 557 aa13□□□□□ -0.33
SF3A2-207ENST00000592839 E7EQL1 145 aa13□□□□□ -0.33
SF3A2-207ENST00000592839 ZNF587BE7ETH6 402 aa13□□□□□ -0.33
SF3A2-207ENST00000592839 H7C417 338 aa13□□□□□ -0.33
SF3A2-207ENST00000592839 LYPD3O95274 346 aa13□□□□□ -0.33
SF3A2-207ENST00000592839 MT-ATP6P00846 226 aa13□□□□□ -0.33
SF3A2-207ENST00000592839 IGKV3-15P01624 115 aa13□□□□□ -0.33
SF3A2-207ENST00000592839 IGLV1-44P01699 117 aa13□□□□□ -0.33
SF3A2-207ENST00000592839 BGLAPP02818 100 aa13□□□□□ -0.33
SF3A2-207ENST00000592839 CD247P20963 164 aa13□□□□□ -0.33
SF3A2-207ENST00000592839 TTKP33981 857 aa13□□□□□ -0.33
SF3A2-207ENST00000592839 RPS5P46782 204 aaKnown RBP13□□□□□ -0.33
SF3A2-207ENST00000592839 CDH11P55287 796 aa13□□□□□ -0.33
SF3A2-207ENST00000592839 ATP5J2P56134 94 aa13□□□□□ -0.33
SF3A2-207ENST00000592839 MTPNP58546 118 aa13□□□□□ -0.33
SF3A2-207ENST00000592839 PRPS1P60891 318 aa13□□□□□ -0.33
SF3A2-207ENST00000592839 OR1Q1Q15612 314 aa13□□□□□ -0.33
SF3A2-207ENST00000592839 NPTX1Q15818 432 aa13□□□□□ -0.33
SF3A2-207ENST00000592839 INTS11Q5TA45 600 aaKnown RBP13□□□□□ -0.33
SF3A2-207ENST00000592839 CLEC9AQ6UXN8 241 aa13□□□□□ -0.33
SF3A2-207ENST00000592839 Q71RC1 249 aaPredicted RBP13□□□□□ -0.33
SF3A2-207ENST00000592839 H1FNTQ75WM6 255 aaPredicted RBP13□□□□□ -0.33
SF3A2-207ENST00000592839 LINGO2Q7L985 606 aa13□□□□□ -0.33
SF3A2-207ENST00000592839 GPAT4Q86UL3 456 aa13□□□□□ -0.33
SF3A2-207ENST00000592839 CIARTQ8N365 385 aaPredicted RBP13□□□□□ -0.33
SF3A2-207ENST00000592839 OR1K1Q8NGR3 316 aa13□□□□□ -0.33
SF3A2-207ENST00000592839 OR52N5Q8NH56 324 aa13□□□□□ -0.33
SF3A2-207ENST00000592839 TRMT61AQ96FX7 289 aaKnown RBP13□□□□□ -0.33
SF3A2-207ENST00000592839 LRR1Q96L50 414 aa13□□□□□ -0.33
SF3A2-207ENST00000592839 SMR3AQ99954 134 aa13□□□□□ -0.33
SF3A2-207ENST00000592839 SH3GL1Q99961 368 aa13□□□□□ -0.33
SF3A2-207ENST00000592839 TMEM120AQ9BXJ8 343 aa13□□□□□ -0.33
SF3A2-207ENST00000592839 SLC19A3Q9BZV2 496 aa13□□□□□ -0.33
SF3A2-207ENST00000592839 TMEM27Q9HBJ8 222 aa13□□□□□ -0.33
SF3A2-207ENST00000592839 RPS6KB2Q9UBS0 482 aa13□□□□□ -0.33
SF3A2-207ENST00000592839 ABCA1O95477 2261 aa12.99□□□□□ -0.33
SF3A2-207ENST00000592839 M0QX08 132 aa12.99□□□□□ -0.33
SF3A2-207ENST00000592839 M0R082 166 aa12.99□□□□□ -0.33
SF3A2-207ENST00000592839 AKAP8O43823 692 aaKnown RBP12.99□□□□□ -0.33
SF3A2-207ENST00000592839 WNT11O96014 354 aa12.99□□□□□ -0.33
SF3A2-207ENST00000592839 TROVE2P10155 538 aaKnown RBP eCLIP12.99□□□□□ -0.33
SF3A2-207ENST00000592839 ZNF43P17038 809 aa12.99□□□□□ -0.33
SF3A2-207ENST00000592839 GRPRP30550 384 aa12.99□□□□□ -0.33
SF3A2-207ENST00000592839 NCALDP61601 193 aa12.99□□□□□ -0.33
SF3A2-207ENST00000592839 NFYCQ13952 458 aa12.99□□□□□ -0.33
SF3A2-207ENST00000592839 CYP51A1Q16850 503 aa12.99□□□□□ -0.33
SF3A2-207ENST00000592839 VMACQ2NL98 169 aa12.99□□□□□ -0.33
SF3A2-207ENST00000592839 TBRG1Q3YBR2 411 aa12.99□□□□□ -0.33
SF3A2-207ENST00000592839 AGAP6Q5VW22 663 aa12.99□□□□□ -0.33
SF3A2-207ENST00000592839 NANOGP8Q6NSW7 305 aa12.99□□□□□ -0.33
SF3A2-207ENST00000592839 B3GLCTQ6Y288 498 aa12.99□□□□□ -0.33
SF3A2-207ENST00000592839 LSRQ86X29 649 aaPredicted RBP12.99□□□□□ -0.33
SF3A2-207ENST00000592839 ZNF417Q8TAU3 575 aa12.99□□□□□ -0.33
SF3A2-207ENST00000592839 BCL2L2Q92843 193 aaPredicted RBP12.99□□□□□ -0.33
SF3A2-207ENST00000592839 MPP4Q96JB8 637 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms