RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 IGKV3-15P01624 115 aa16.44■□□□□ 0.22
CCDC43-205ENST00000592333 IGLV1-44P01699 117 aa16.44■□□□□ 0.22
CCDC43-205ENST00000592333 PNMTP11086 282 aa16.44■□□□□ 0.22
CCDC43-205ENST00000592333 ZNF43P17038 809 aa16.44■□□□□ 0.22
CCDC43-205ENST00000592333 GTF2E2P29084 291 aaKnown RBP16.44■□□□□ 0.22
CCDC43-205ENST00000592333 SERPINF1P36955 418 aa16.44■□□□□ 0.22
CCDC43-205ENST00000592333 SELENOPP49908 381 aa16.44■□□□□ 0.22
CCDC43-205ENST00000592333 SNRPD2P62316 118 aaKnown RBP16.44■□□□□ 0.22
CCDC43-205ENST00000592333 EGR4Q05215 589 aa16.44■□□□□ 0.22
CCDC43-205ENST00000592333 MFSD13AQ14CX5 517 aa16.44■□□□□ 0.22
CCDC43-205ENST00000592333 EFNB3Q15768 340 aa16.44■□□□□ 0.22
CCDC43-205ENST00000592333 FAM69AQ5T7M9 428 aa16.44■□□□□ 0.22
CCDC43-205ENST00000592333 CYB5R2Q6BCY4 276 aa16.44■□□□□ 0.22
CCDC43-205ENST00000592333 NIPAL3Q6P499 406 aa16.44■□□□□ 0.22
CCDC43-205ENST00000592333 EPGNQ6UW88 154 aa16.44■□□□□ 0.22
CCDC43-205ENST00000592333 MAVSQ7Z434 540 aa16.44■□□□□ 0.22
CCDC43-205ENST00000592333 GOLGA6L1Q8N7Z2 621 aa16.44■□□□□ 0.22
CCDC43-205ENST00000592333 BHLHE22Q8NFJ8 381 aaPredicted RBP16.44■□□□□ 0.22
CCDC43-205ENST00000592333 OR6S1Q8NH40 331 aa16.44■□□□□ 0.22
CCDC43-205ENST00000592333 MGARPQ8TDB4 240 aa16.44■□□□□ 0.22
CCDC43-205ENST00000592333 VPS33AQ96AX1 596 aa16.44■□□□□ 0.22
CCDC43-205ENST00000592333 OR52B2Q96RD2 323 aa16.44■□□□□ 0.22
CCDC43-205ENST00000592333 PTDSS2Q9BVG9 487 aa16.44■□□□□ 0.22
CCDC43-205ENST00000592333 SPATA5L1Q9BVQ7 753 aa16.44■□□□□ 0.22
CCDC43-205ENST00000592333 CA10Q9NS85 328 aa16.44■□□□□ 0.22
CCDC43-205ENST00000592333 RPS6KB2Q9UBS0 482 aa16.44■□□□□ 0.22
CCDC43-205ENST00000592333 ANK3Q12955 4377 aaKnown RBP16.43■□□□□ 0.22
CCDC43-205ENST00000592333 VWC2LB2RUY7 222 aa16.43■□□□□ 0.22
CCDC43-205ENST00000592333 C5orf58C9J3I9 102 aa16.43■□□□□ 0.22
CCDC43-205ENST00000592333 AKAP8O43823 692 aaKnown RBP16.43■□□□□ 0.22
CCDC43-205ENST00000592333 ERLIN1O75477 346 aa16.43■□□□□ 0.22
CCDC43-205ENST00000592333 LGI1O95970 557 aa16.43■□□□□ 0.22
CCDC43-205ENST00000592333 HOXB9P17482 250 aaPredicted RBP16.43■□□□□ 0.22
CCDC43-205ENST00000592333 CDH2P19022 906 aaPredicted RBP16.43■□□□□ 0.22
CCDC43-205ENST00000592333 GZMKP49863 264 aa16.43■□□□□ 0.22
CCDC43-205ENST00000592333 PDLIM4P50479 330 aa16.43■□□□□ 0.22
CCDC43-205ENST00000592333 STX1BP61266 288 aa16.43■□□□□ 0.22
CCDC43-205ENST00000592333 MAGOHP61326 146 aaKnown RBP16.43■□□□□ 0.22
CCDC43-205ENST00000592333 LSM11P83369 360 aaKnown RBP eCLIP16.43■□□□□ 0.227e-6■■■■□ 19.8
CCDC43-205ENST00000592333 GTDC1Q4AE62 458 aa16.43■□□□□ 0.22
CCDC43-205ENST00000592333 RPS26P11Q5JNZ5 115 aaPredicted RBP16.43■□□□□ 0.22
CCDC43-205ENST00000592333 LRIF1Q5T3J3 769 aa16.43■□□□□ 0.22
CCDC43-205ENST00000592333 FAM91A1Q658Y4 838 aa16.43■□□□□ 0.22
CCDC43-205ENST00000592333 ZNF540Q8NDQ6 660 aa16.43■□□□□ 0.22
CCDC43-205ENST00000592333 ADPRHL1Q8NDY3 354 aa16.43■□□□□ 0.22
CCDC43-205ENST00000592333 NUP37Q8NFH4 326 aa16.43■□□□□ 0.22
CCDC43-205ENST00000592333 IL17RDQ8NFM7 739 aa16.43■□□□□ 0.22
CCDC43-205ENST00000592333 TMEM158Q8WZ71 300 aa16.43■□□□□ 0.22
CCDC43-205ENST00000592333 SLC38A4Q969I6 547 aa16.43■□□□□ 0.22
CCDC43-205ENST00000592333 C7orf26Q96N11 449 aa16.43■□□□□ 0.22
CCDC43-205ENST00000592333 STAB1Q9NY15 2570 aa16.43■□□□□ 0.22
CCDC43-205ENST00000592333 RTTNQ86VV8 2226 aa16.43■□□□□ 0.22
CCDC43-205ENST00000592333 LOC390937A0A1W2PQ73 354 aa16.42■□□□□ 0.22
CCDC43-205ENST00000592333 AIM2O14862 343 aa16.42■□□□□ 0.22
CCDC43-205ENST00000592333 SLC43A1O75387 559 aa16.42■□□□□ 0.22
CCDC43-205ENST00000592333 UPK3AO75631 287 aa16.42■□□□□ 0.22
CCDC43-205ENST00000592333 NAAAQ02083 359 aa16.42■□□□□ 0.22
CCDC43-205ENST00000592333 DHRS4L2Q6PKH6 230 aa16.42■□□□□ 0.22
CCDC43-205ENST00000592333 KRT73Q86Y46 540 aa16.42■□□□□ 0.22
CCDC43-205ENST00000592333 OR9I1Q8NGQ6 314 aa16.42■□□□□ 0.22
CCDC43-205ENST00000592333 FBXO17Q96EF6 278 aa16.42■□□□□ 0.22
CCDC43-205ENST00000592333 ALKBH3Q96Q83 286 aaPredicted RBP16.42■□□□□ 0.22
CCDC43-205ENST00000592333 PLK3Q9H4B4 646 aa16.42■□□□□ 0.22
CCDC43-205ENST00000592333 ZNF442Q9H7R0 627 aa16.42■□□□□ 0.22
CCDC43-205ENST00000592333 TMBIM4Q9HC24 238 aa16.42■□□□□ 0.22
CCDC43-205ENST00000592333 CORO2BQ9UQ03 480 aa16.42■□□□□ 0.22
CCDC43-205ENST00000592333 USH1CQ9Y6N9 552 aa16.42■□□□□ 0.22
CCDC43-205ENST00000592333 PRORSD1PA6NEY8 169 aa16.41■□□□□ 0.22
CCDC43-205ENST00000592333 CBR1P16152 277 aa16.41■□□□□ 0.22
CCDC43-205ENST00000592333 ARR3P36575 388 aa16.41■□□□□ 0.22
CCDC43-205ENST00000592333 RPS5P46782 204 aaKnown RBP16.41■□□□□ 0.22
CCDC43-205ENST00000592333 PPOXP50336 477 aa16.41■□□□□ 0.22
CCDC43-205ENST00000592333 CLDN17P56750 224 aa16.41■□□□□ 0.22
CCDC43-205ENST00000592333 ROR2Q01974 943 aaKnown RBP16.41■□□□□ 0.22
CCDC43-205ENST00000592333 REEP3Q6NUK4 255 aa16.41■□□□□ 0.22
CCDC43-205ENST00000592333 ULK3Q6PHR2 472 aa16.41■□□□□ 0.22
CCDC43-205ENST00000592333 BLOC1S3Q6QNY0 202 aa16.41■□□□□ 0.22
CCDC43-205ENST00000592333 H1FNTQ75WM6 255 aaPredicted RBP16.41■□□□□ 0.22
CCDC43-205ENST00000592333 PIK3C3Q8NEB9 887 aa16.41■□□□□ 0.22
CCDC43-205ENST00000592333 NANOS1Q8WY41 292 aaKnown RBP16.41■□□□□ 0.22
CCDC43-205ENST00000592333 SLC25A36Q96CQ1 311 aa16.41■□□□□ 0.22
CCDC43-205ENST00000592333 KTI12Q96EK9 354 aaPredicted RBP16.41■□□□□ 0.22
CCDC43-205ENST00000592333 KCNK17Q96T54 332 aa16.41■□□□□ 0.22
CCDC43-205ENST00000592333 PIMREGQ9BSJ6 248 aa16.41■□□□□ 0.22
CCDC43-205ENST00000592333 TCF7L2Q9NQB0 619 aa16.41■□□□□ 0.22
CCDC43-205ENST00000592333 B3GAT1Q9P2W7 334 aa16.41■□□□□ 0.22
CCDC43-205ENST00000592333 CORINQ9Y5Q5 1042 aa16.41■□□□□ 0.22
CCDC43-205ENST00000592333 YLPM1P49750 1951 aaKnown RBP16.4■□□□□ 0.22
CCDC43-205ENST00000592333 ARFGEF3Q5TH69 2177 aa16.4■□□□□ 0.22
CCDC43-205ENST00000592333 TRAV36DV7A0A075B6V5 113 aa16.4■□□□□ 0.22
CCDC43-205ENST00000592333 POLR3GO15318 223 aaPredicted RBP16.4■□□□□ 0.22
CCDC43-205ENST00000592333 NUDT7P0C024 238 aa16.4■□□□□ 0.22
CCDC43-205ENST00000592333 CECR9P0C854 216 aa16.4■□□□□ 0.22
CCDC43-205ENST00000592333 ARAFP10398 606 aa16.4■□□□□ 0.22
CCDC43-205ENST00000592333 NR4A2P43354 598 aa16.4■□□□□ 0.22
CCDC43-205ENST00000592333 ADIPOQQ15848 244 aa16.4■□□□□ 0.22
CCDC43-205ENST00000592333 SLC2A7Q6PXP3 512 aa16.4■□□□□ 0.22
CCDC43-205ENST00000592333 LINGO2Q7L985 606 aa16.4■□□□□ 0.22
CCDC43-205ENST00000592333 GPR137CQ8N3F9 429 aa16.4■□□□□ 0.22
CCDC43-205ENST00000592333 SCAIQ8N9R8 606 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms