RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 MANSC1Q9H8J5 431 aa8.86□□□□□ -0.99
VMP1-214ENST00000592106 SDR39U1Q9NRG7 319 aaPredicted RBP8.86□□□□□ -0.99
VMP1-214ENST00000592106 SELENONQ9NZV5 590 aa8.86□□□□□ -0.99
VMP1-214ENST00000592106 RCE1Q9Y256 329 aa8.86□□□□□ -0.99
VMP1-214ENST00000592106 NSD1Q96L73 2696 aaPredicted RBP8.85□□□□□ -0.99
VMP1-214ENST00000592106 ARPC4-TTLL3A0A0A6YYG9 625 aa8.85□□□□□ -0.99
VMP1-214ENST00000592106 TMEM229AB2RXF0 380 aa8.85□□□□□ -0.99
VMP1-214ENST00000592106 B9A039 149 aa8.85□□□□□ -0.99
VMP1-214ENST00000592106 AIM2O14862 343 aa8.85□□□□□ -0.99
VMP1-214ENST00000592106 SLC43A1O75387 559 aa8.85□□□□□ -0.99
VMP1-214ENST00000592106 LGI1O95970 557 aa8.85□□□□□ -0.99
VMP1-214ENST00000592106 C1QCP02747 245 aa8.85□□□□□ -0.99
VMP1-214ENST00000592106 ZNF16P17020 682 aaPredicted RBP8.85□□□□□ -0.99
VMP1-214ENST00000592106 HNF1AP20823 631 aa8.85□□□□□ -0.99
VMP1-214ENST00000592106 PPIBP23284 216 aaKnown RBP8.85□□□□□ -0.99
VMP1-214ENST00000592106 SELENOPP49908 381 aa8.85□□□□□ -0.99
VMP1-214ENST00000592106 POLR2JP52435 117 aaKnown RBP8.85□□□□□ -0.99
VMP1-214ENST00000592106 IL1RL1Q01638 556 aa8.85□□□□□ -0.99
VMP1-214ENST00000592106 BNIP2Q12982 314 aa8.85□□□□□ -0.99
VMP1-214ENST00000592106 C1DQ13901 141 aaKnown RBP8.85□□□□□ -0.99
VMP1-214ENST00000592106 HIKESHIQ53FT3 197 aa8.85□□□□□ -0.99
VMP1-214ENST00000592106 RPS26P11Q5JNZ5 115 aaPredicted RBP8.85□□□□□ -0.99
VMP1-214ENST00000592106 ANKRD16Q6P6B7 361 aa8.85□□□□□ -0.99
VMP1-214ENST00000592106 CREB3L2Q70SY1 520 aa8.85□□□□□ -0.99
VMP1-214ENST00000592106 KRT73Q86Y46 540 aa8.85□□□□□ -0.99
VMP1-214ENST00000592106 GPR137CQ8N3F9 429 aa8.85□□□□□ -0.99
VMP1-214ENST00000592106 ZNF540Q8NDQ6 660 aa8.85□□□□□ -0.99
VMP1-214ENST00000592106 OR4F15Q8NGB8 312 aa8.85□□□□□ -0.99
VMP1-214ENST00000592106 SLC38A5Q8WUX1 472 aa8.85□□□□□ -0.99
VMP1-214ENST00000592106 HTRA1Q92743 480 aa8.85□□□□□ -0.99
VMP1-214ENST00000592106 SLC38A4Q969I6 547 aa8.85□□□□□ -0.99
VMP1-214ENST00000592106 SLC25A36Q96CQ1 311 aa8.85□□□□□ -0.99
VMP1-214ENST00000592106 SPATA5L1Q9BVQ7 753 aa8.85□□□□□ -0.99
VMP1-214ENST00000592106 BEX2Q9BXY8 128 aa8.85□□□□□ -0.99
VMP1-214ENST00000592106 C12orf10Q9HB07 376 aa8.85□□□□□ -0.99
VMP1-214ENST00000592106 A4GALTQ9NPC4 353 aa8.85□□□□□ -0.99
VMP1-214ENST00000592106 KCNS2Q9ULS6 477 aa8.85□□□□□ -0.99
VMP1-214ENST00000592106 CADP27708 2225 aa8.85□□□□□ -0.99
VMP1-214ENST00000592106 A0A096LNT2 108 aa8.84□□□□□ -0.99
VMP1-214ENST00000592106 IGHV1-18A0A0C4DH31 117 aa8.84□□□□□ -0.99
VMP1-214ENST00000592106 CLIC1O00299 241 aa8.84□□□□□ -0.99
VMP1-214ENST00000592106 KLF11O14901 512 aa8.84□□□□□ -0.99
VMP1-214ENST00000592106 POLR3GO15318 223 aaPredicted RBP8.84□□□□□ -0.99
VMP1-214ENST00000592106 GPRIN2O60269 458 aa8.84□□□□□ -0.99
VMP1-214ENST00000592106 NPIPB7O75200 414 aa8.84□□□□□ -0.99
VMP1-214ENST00000592106 ERLIN1O75477 346 aa8.84□□□□□ -0.99
VMP1-214ENST00000592106 VIMP08670 466 aaKnown RBP8.84□□□□□ -0.99
VMP1-214ENST00000592106 PNMTP11086 282 aa8.84□□□□□ -0.99
VMP1-214ENST00000592106 APEHP13798 732 aaKnown RBP8.84□□□□□ -0.99
VMP1-214ENST00000592106 MVDP53602 400 aa8.84□□□□□ -0.99
VMP1-214ENST00000592106 SLC18A1P54219 525 aa8.84□□□□□ -0.99
VMP1-214ENST00000592106 CLDN17P56750 224 aa8.84□□□□□ -0.99
VMP1-214ENST00000592106 ROR2Q01974 943 aaKnown RBP8.84□□□□□ -0.99
VMP1-214ENST00000592106 GGTLC2Q14390 218 aa8.84□□□□□ -0.99
VMP1-214ENST00000592106 MFSD13AQ14CX5 517 aa8.84□□□□□ -0.99
VMP1-214ENST00000592106 CARTPTQ16568 116 aa8.84□□□□□ -0.99
VMP1-214ENST00000592106 GTDC1Q4AE62 458 aa8.84□□□□□ -0.99
VMP1-214ENST00000592106 SLC9B1Q4ZJI4 515 aa8.84□□□□□ -0.99
VMP1-214ENST00000592106 FAM69AQ5T7M9 428 aa8.84□□□□□ -0.99
VMP1-214ENST00000592106 FAM166AQ6J272 317 aa8.84□□□□□ -0.99
VMP1-214ENST00000592106 CSPG4Q6UVK1 2322 aa8.84□□□□□ -0.99
VMP1-214ENST00000592106 C6orf89Q6UWU4 347 aa8.84□□□□□ -0.99
VMP1-214ENST00000592106 SERPINA11Q86U17 422 aa8.84□□□□□ -0.99
VMP1-214ENST00000592106 FAM169BQ8N8A8 192 aa8.84□□□□□ -0.99
VMP1-214ENST00000592106 ZIC4Q8N9L1 334 aa8.84□□□□□ -0.99
VMP1-214ENST00000592106 PIK3C3Q8NEB9 887 aa8.84□□□□□ -0.99
VMP1-214ENST00000592106 VRK1Q99986 396 aaPredicted RBP8.84□□□□□ -0.99
VMP1-214ENST00000592106 RAB1BQ9H0U4 201 aa8.84□□□□□ -0.99
VMP1-214ENST00000592106 EVA1AQ9H8M9 152 aa8.84□□□□□ -0.99
VMP1-214ENST00000592106 BCL2L10Q9HD36 194 aa8.84□□□□□ -0.99
VMP1-214ENST00000592106 B3GAT2Q9NPZ5 323 aa8.84□□□□□ -0.99
VMP1-214ENST00000592106 CA10Q9NS85 328 aa8.84□□□□□ -0.99
VMP1-214ENST00000592106 TESQ9UGI8 421 aaKnown RBP8.84□□□□□ -0.99
VMP1-214ENST00000592106 SLC13A4Q9UKG4 626 aa8.84□□□□□ -0.99
VMP1-214ENST00000592106 CORO2BQ9UQ03 480 aa8.84□□□□□ -0.99
VMP1-214ENST00000592106 LOC390937A0A1W2PQ73 354 aa8.83□□□□□ -1
VMP1-214ENST00000592106 PRORSD1PA6NEY8 169 aa8.83□□□□□ -1
VMP1-214ENST00000592106 RPL36A-HNRNPH2H7BZ11 118 aa8.83□□□□□ -1
VMP1-214ENST00000592106 LMX1BO60663 402 aa8.83□□□□□ -1
VMP1-214ENST00000592106 IGHV4-31P0DP07 118 aa8.83□□□□□ -1
VMP1-214ENST00000592106 PRG2P13727 222 aa8.83□□□□□ -1
VMP1-214ENST00000592106 ETS2P15036 469 aa8.83□□□□□ -1
VMP1-214ENST00000592106 PRKAR1BP31321 381 aa8.83□□□□□ -1
VMP1-214ENST00000592106 SERPINF1P36955 418 aa8.83□□□□□ -1
VMP1-214ENST00000592106 NR4A2P43354 598 aa8.83□□□□□ -1
VMP1-214ENST00000592106 RPS5P46782 204 aaKnown RBP8.83□□□□□ -1
VMP1-214ENST00000592106 PPOXP50336 477 aa8.83□□□□□ -1
VMP1-214ENST00000592106 P2RY4P51582 365 aa8.83□□□□□ -1
VMP1-214ENST00000592106 MAGOHP61326 146 aaKnown RBP8.83□□□□□ -1
VMP1-214ENST00000592106 NAAAQ02083 359 aa8.83□□□□□ -1
VMP1-214ENST00000592106 RGNQ15493 299 aa8.83□□□□□ -1
VMP1-214ENST00000592106 MAPK11Q15759 364 aa8.83□□□□□ -1
VMP1-214ENST00000592106 EFNB3Q15768 340 aa8.83□□□□□ -1
VMP1-214ENST00000592106 SWI5Q1ZZU3 235 aa8.83□□□□□ -1
VMP1-214ENST00000592106 IQCCQ4KMZ1 466 aa8.83□□□□□ -1
VMP1-214ENST00000592106 GCNT6Q5T4J0 391 aa8.83□□□□□ -1
VMP1-214ENST00000592106 VHLLQ6RSH7 139 aa8.83□□□□□ -1
VMP1-214ENST00000592106 NET1Q7Z628 596 aaPredicted RBP8.83□□□□□ -1
VMP1-214ENST00000592106 SNX32Q86XE0 403 aa8.83□□□□□ -1
VMP1-214ENST00000592106 CCDC36Q8IYA8 594 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms