RNA–Protein interactions for RNA: ENST00000589828.1

VAT1-207, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-207ENST00000589828 SPDYE7PQ495Y7 208 aa6.77□□□□□ -1.33
VAT1-207ENST00000589828 TYW3Q6IPR3 259 aaKnown RBP6.77□□□□□ -1.33
VAT1-207ENST00000589828 RBMS3Q6XE24 437 aaKnown RBP6.77□□□□□ -1.33
VAT1-207ENST00000589828 ZNF771Q7L3S4 317 aaPredicted RBP6.77□□□□□ -1.33
VAT1-207ENST00000589828 JAZF1Q86VZ6 243 aa6.77□□□□□ -1.33
VAT1-207ENST00000589828 KIR3DL3Q8N743 410 aa6.77□□□□□ -1.33
VAT1-207ENST00000589828 DEFB108BQ8NET1 73 aa6.77□□□□□ -1.33
VAT1-207ENST00000589828 SFXN5Q8TD22 340 aa6.77□□□□□ -1.33
VAT1-207ENST00000589828 PMM1Q92871 262 aa6.77□□□□□ -1.33
VAT1-207ENST00000589828 TMIGD2Q96BF3 282 aa6.77□□□□□ -1.33
VAT1-207ENST00000589828 DDIT4LQ96D03 193 aa6.77□□□□□ -1.33
VAT1-207ENST00000589828 MTERF3Q96E29 417 aa6.77□□□□□ -1.33
VAT1-207ENST00000589828 LINC00470Q9BZP3 86 aa6.77□□□□□ -1.33
VAT1-207ENST00000589828 MMP27Q9H306 513 aa6.77□□□□□ -1.33
VAT1-207ENST00000589828 PIF1Q9H611 641 aa6.77□□□□□ -1.33
VAT1-207ENST00000589828 MMP26Q9NRE1 261 aa6.77□□□□□ -1.33
VAT1-207ENST00000589828 B3GNT2Q9NY97 397 aa6.77□□□□□ -1.33
VAT1-207ENST00000589828 GIMAP2Q9UG22 337 aa6.77□□□□□ -1.33
VAT1-207ENST00000589828 EMCNQ9ULC0 261 aa6.77□□□□□ -1.33
VAT1-207ENST00000589828 UTP11Q9Y3A2 253 aaKnown RBP6.77□□□□□ -1.33
VAT1-207ENST00000589828 WIPI2Q9Y4P8 454 aa6.77□□□□□ -1.33
VAT1-207ENST00000589828 MMP24Q9Y5R2 645 aa6.77□□□□□ -1.33
VAT1-207ENST00000589828 WNK1Q9H4A3 2382 aa6.76□□□□□ -1.33
VAT1-207ENST00000589828 RYR3Q15413 4870 aa6.76□□□□□ -1.33
VAT1-207ENST00000589828 PRAMEF27A3QJZ7 478 aa6.76□□□□□ -1.33
VAT1-207ENST00000589828 CLDN34H7C241 214 aa6.76□□□□□ -1.33
VAT1-207ENST00000589828 SLC28A1O00337 649 aa6.76□□□□□ -1.33
VAT1-207ENST00000589828 LSM1O15116 133 aaKnown RBP6.76□□□□□ -1.33
VAT1-207ENST00000589828 CRCPO75575 148 aa6.76□□□□□ -1.33
VAT1-207ENST00000589828 ZNF432O94892 652 aa6.76□□□□□ -1.33
VAT1-207ENST00000589828 CLPTM1O96005 669 aa6.76□□□□□ -1.33
VAT1-207ENST00000589828 HLA-HP01893 362 aa6.76□□□□□ -1.33
VAT1-207ENST00000589828 SNRPAP09012 282 aaKnown RBP6.76□□□□□ -1.33
VAT1-207ENST00000589828 LINC00032P0C843 101 aa6.76□□□□□ -1.33
VAT1-207ENST00000589828 UROSP10746 265 aa6.76□□□□□ -1.33
VAT1-207ENST00000589828 ZNF14P17017 642 aaPredicted RBP6.76□□□□□ -1.33
VAT1-207ENST00000589828 MATN1P21941 496 aa6.76□□□□□ -1.33
VAT1-207ENST00000589828 GCAP28676 217 aa6.76□□□□□ -1.33
VAT1-207ENST00000589828 PCGF2P35227 344 aa6.76□□□□□ -1.33
VAT1-207ENST00000589828 PHBP35232 272 aa6.76□□□□□ -1.33
VAT1-207ENST00000589828 GLRXP35754 106 aa6.76□□□□□ -1.33
VAT1-207ENST00000589828 RBMXP38159 391 aaKnown RBP6.76□□□□□ -1.33
VAT1-207ENST00000589828 SH3BGRP55822 239 aaPredicted RBP6.76□□□□□ -1.33
VAT1-207ENST00000589828 GNG11P61952 73 aa6.76□□□□□ -1.33
VAT1-207ENST00000589828 ETF1P62495 437 aaKnown RBP6.76□□□□□ -1.33
VAT1-207ENST00000589828 HBA1P69905 142 aa6.76□□□□□ -1.33
VAT1-207ENST00000589828 KCNJ10P78508 379 aa6.76□□□□□ -1.33
VAT1-207ENST00000589828 CCL8P80075 99 aa6.76□□□□□ -1.33
VAT1-207ENST00000589828 BNIP2Q12982 314 aa6.76□□□□□ -1.33
VAT1-207ENST00000589828 CEACAM16Q2WEN9 425 aa6.76□□□□□ -1.33
VAT1-207ENST00000589828 PHYHD1Q5SRE7 291 aa6.76□□□□□ -1.33
VAT1-207ENST00000589828 ASPHD2Q6ICH7 369 aa6.76□□□□□ -1.33
VAT1-207ENST00000589828 FRRS1Q6ZNA5 592 aa6.76□□□□□ -1.33
VAT1-207ENST00000589828 TIFABQ6ZNK6 161 aa6.76□□□□□ -1.33
VAT1-207ENST00000589828 FRMD7Q6ZUT3 714 aa6.76□□□□□ -1.33
VAT1-207ENST00000589828 C6orf120Q7Z4R8 191 aa6.76□□□□□ -1.33
VAT1-207ENST00000589828 R3HCC1LQ7Z5L2 792 aaKnown RBP6.76□□□□□ -1.33
VAT1-207ENST00000589828 WDFY1Q8IWB7 410 aa6.76□□□□□ -1.33
VAT1-207ENST00000589828 KDM8Q8N371 416 aa6.76□□□□□ -1.33
VAT1-207ENST00000589828 ARFGAP2Q8N6H7 521 aa6.76□□□□□ -1.33
VAT1-207ENST00000589828 IL17RDQ8NFM7 739 aa6.76□□□□□ -1.33
VAT1-207ENST00000589828 GTF3AQ92664 365 aaKnown RBP6.76□□□□□ -1.33
VAT1-207ENST00000589828 RAB8BQ92930 207 aa6.76□□□□□ -1.33
VAT1-207ENST00000589828 RAB39BQ96DA2 213 aa6.76□□□□□ -1.33
VAT1-207ENST00000589828 TSPAN32Q96QS1 320 aa6.76□□□□□ -1.33
VAT1-207ENST00000589828 CCT8L2Q96SF2 557 aa6.76□□□□□ -1.33
VAT1-207ENST00000589828 NAPGQ99747 312 aaPredicted RBP6.76□□□□□ -1.33
VAT1-207ENST00000589828 CITED1Q99966 193 aa6.76□□□□□ -1.33
VAT1-207ENST00000589828 ZNF385DQ9H6B1 395 aa6.76□□□□□ -1.33
VAT1-207ENST00000589828 ZMAT3Q9HA38 289 aaKnown RBP6.76□□□□□ -1.33
VAT1-207ENST00000589828 GPR35Q9HC97 309 aa6.76□□□□□ -1.33
VAT1-207ENST00000589828 MOV10Q9HCE1 1003 aaKnown RBP6.76□□□□□ -1.33
VAT1-207ENST00000589828 EXOSC3Q9NQT5 275 aaKnown RBP6.76□□□□□ -1.33
VAT1-207ENST00000589828 PLEK2Q9NYT0 353 aa6.76□□□□□ -1.33
VAT1-207ENST00000589828 LEF1Q9UJU2 399 aaPredicted RBP6.76□□□□□ -1.33
VAT1-207ENST00000589828 ZNF180Q9UJW8 692 aa6.76□□□□□ -1.33
VAT1-207ENST00000589828 NUP50Q9UKX7 468 aa6.76□□□□□ -1.33
VAT1-207ENST00000589828 ZNF232Q9UNY5 417 aa6.76□□□□□ -1.33
VAT1-207ENST00000589828 SLC35A3Q9Y2D2 325 aa6.76□□□□□ -1.33
VAT1-207ENST00000589828 SCN2BO60939 215 aa6.75□□□□□ -1.33
VAT1-207ENST00000589828 AK1P00568 194 aa6.75□□□□□ -1.33
VAT1-207ENST00000589828 KNG1P01042 644 aa6.75□□□□□ -1.33
VAT1-207ENST00000589828 C1QCP02747 245 aa6.75□□□□□ -1.33
VAT1-207ENST00000589828 GPIP06744 558 aa6.75□□□□□ -1.33
VAT1-207ENST00000589828 OR12D1P0DN82 309 aa6.75□□□□□ -1.33
VAT1-207ENST00000589828 GATA3P23771 443 aa6.75□□□□□ -1.33
VAT1-207ENST00000589828 SOAT1P35610 550 aa6.75□□□□□ -1.33
VAT1-207ENST00000589828 HTR3AP46098 478 aa6.75□□□□□ -1.33
VAT1-207ENST00000589828 CAPZA2P47755 286 aa6.75□□□□□ -1.33
VAT1-207ENST00000589828 CLDN17P56750 224 aa6.75□□□□□ -1.33
VAT1-207ENST00000589828 SLC7A5Q01650 507 aa6.75□□□□□ -1.33
VAT1-207ENST00000589828 PIGFQ07326 219 aa6.75□□□□□ -1.33
VAT1-207ENST00000589828 GALNTL6Q49A17 601 aa6.75□□□□□ -1.33
VAT1-207ENST00000589828 SAXO2Q658L1 398 aa6.75□□□□□ -1.33
VAT1-207ENST00000589828 REP15Q6BDI9 236 aa6.75□□□□□ -1.33
VAT1-207ENST00000589828 TMEM225Q6GV28 225 aa6.75□□□□□ -1.33
VAT1-207ENST00000589828 C16orf87Q6PH81 154 aa6.75□□□□□ -1.33
VAT1-207ENST00000589828 Q6ZPA2 131 aa6.75□□□□□ -1.33
VAT1-207ENST00000589828 GSPT2Q8IYD1 628 aaKnown RBP6.75□□□□□ -1.33
VAT1-207ENST00000589828 KRTCAP2Q8N6L1 136 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms