RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 DGAT2L6Q6ZPD8 337 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 SYT13Q7L8C5 426 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 NUP54Q7Z3B4 507 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 FAM220AQ7Z4H9 259 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 ARL14Q8N4G2 192 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 SDR9C7Q8NEX9 313 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 TSTD1Q8NFU3 115 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 OR4M2Q8NGB6 313 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 OR6K6Q8NGW6 343 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 OR4C3Q8NH37 302 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 OR51Q1Q8NH59 317 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 ZMYND19Q96E35 227 aaPredicted RBP6.77□□□□□ -1.33
ZNF540-206ENST00000589117 SLC46A1Q96NT5 459 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 MAP3K3Q99759 626 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 C7orf50Q9BRJ6 194 aaKnown RBP6.77□□□□□ -1.33
ZNF540-206ENST00000589117 TRAF4Q9BUZ4 470 aaPredicted RBP6.77□□□□□ -1.33
ZNF540-206ENST00000589117 LRRC61Q9BV99 259 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 SLITRK2Q9H156 845 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 ABCG5Q9H222 651 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 SLA2Q9H6Q3 261 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 MARCH7Q9H992 704 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 NANSQ9NR45 359 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 NUFIP1Q9UHK0 495 aaKnown RBP6.77□□□□□ -1.33
ZNF540-206ENST00000589117 GNG8Q9UK08 70 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 CLCA3PQ9Y6N3 262 aa6.77□□□□□ -1.33
ZNF540-206ENST00000589117 ATG2AQ2TAZ0 1938 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 SHISA3A0PJX4 238 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 ANKRD61A6NGH8 418 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 OR6C70A6NIJ9 312 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 FAM47E-STBD1D6RA91 191 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 E9PI62 339 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 IMPA2O14732 288 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 GNB5O14775 395 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 UBL3O95164 117 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 NGFRP08138 427 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 UBL4AP11441 157 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 IL9P15248 144 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 EDNRAP25101 427 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 MAPK3P27361 379 aaPredicted RBP6.76□□□□□ -1.33
ZNF540-206ENST00000589117 CD38P28907 300 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 SLC6A1P30531 599 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 SLC6A8P48029 635 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 DCAF7P61962 342 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 E2F1Q01094 437 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 CD83Q01151 205 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 MAB21L1Q13394 359 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 ODF1Q14990 250 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 CDK5R1Q15078 307 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 ANGPT1Q15389 498 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 CDONQ4KMG0 1287 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 HSD17B12Q53GQ0 312 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 EMC4Q5J8M3 183 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 TRILQ7L0X0 811 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 KRT74Q7RTS7 529 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 CDH24Q86UP0 819 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 SLC35F3Q8IY50 421 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 TOMM5Q8N4H5 51 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 ZNF671Q8TAW3 534 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 PHOSPHO1Q8TCT1 267 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 C15orf40Q8WUR7 153 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 ADAMTS14Q8WXS8 1223 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 AKAP1Q92667 903 aaKnown RBP eCLIP6.76□□□□□ -1.33
ZNF540-206ENST00000589117 MVB12AQ96EY5 273 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 PGLYRP3Q96LB9 341 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 HSPA12BQ96MM6 686 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 MNTQ99583 582 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 YIPF2Q9BWQ6 316 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 ACTR6Q9GZN1 396 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 NIPAL2Q9H841 368 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 RANGRFQ9HD47 186 aaPredicted RBP6.76□□□□□ -1.33
ZNF540-206ENST00000589117 NRIP3Q9NQ35 241 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 EXOSC3Q9NQT5 275 aaKnown RBP6.76□□□□□ -1.33
ZNF540-206ENST00000589117 LRIT1Q9P2V4 623 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 MMACHCQ9Y4U1 282 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 FANCMQ8IYD8 2048 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 A0A1W2PRG6 482 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 A8MU76 341 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 C17orf105B2RV13 164 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 MCIDASD6RGH6 385 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 BLOC1S5-TXNDC5H3BN57 136 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 ZNF264O43296 627 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 GLCEO94923 617 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 CD14P08571 375 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 UCHL1P09936 223 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 SPI1P17947 270 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 MAOAP21397 527 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 AHCYP23526 432 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 CD27P26842 260 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 CD1CP29017 333 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 LTBRP36941 435 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 MMP15P51511 669 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 CCR4P51679 360 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 MAZP56270 477 aaKnown RBP6.76□□□□□ -1.33
ZNF540-206ENST00000589117 HNRNPKP61978 463 aaKnown RBP eCLIP6.76□□□□□ -1.33
ZNF540-206ENST00000589117 RRAS2P62070 204 aaPredicted RBP6.76□□□□□ -1.33
ZNF540-206ENST00000589117 BTG2P78543 158 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 MADCAM1Q13477 382 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 TP53I3Q53FA7 332 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 YIF1BQ5BJH7 314 aa6.76□□□□□ -1.33
ZNF540-206ENST00000589117 HLA-DQA1Q5Y7H0 255 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms