RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 FAM183AA6NL82 134 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 FTCDNL1E5RQL4 147 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 PTHP01270 115 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 LCKP06239 509 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 LIFP15018 202 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 HIST1H1CP16403 213 aaKnown RBP10.89□□□□□ -0.67
CCBE1-203ENST00000589116 MYL12AP19105 171 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 SDHAP31040 664 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 CLK1P49759 484 aaKnown RBP10.89□□□□□ -0.67
CCBE1-203ENST00000589116 DSCR4P56555 118 aaPredicted RBP10.89□□□□□ -0.67
CCBE1-203ENST00000589116 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.89□□□□□ -0.67
CCBE1-203ENST00000589116 SELENBP1Q13228 472 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 RTP5Q14D33 572 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 GXYLT1Q4G148 440 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 GPR107Q5VW38 600 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 C1QL3Q5VWW1 255 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 TIGD3Q6B0B8 471 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 FAM122BQ7Z309 247 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 IGFN1Q86VF2 1251 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 GTPBP8Q8N3Z3 284 aaPredicted RBP10.89□□□□□ -0.67
CCBE1-203ENST00000589116 SCAIQ8N9R8 606 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 FAM98AQ8NCA5 519 aaKnown RBP10.89□□□□□ -0.67
CCBE1-203ENST00000589116 SLC37A3Q8NCC5 494 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 PSD4Q8NDX1 1056 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 PROKR2Q8NFJ6 384 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 BBS1Q8NFJ9 593 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 OR52E2Q8NGJ4 325 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 POC1BQ8TC44 478 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 RAB2BQ8WUD1 216 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 DTNBP1Q96EV8 351 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 UBL7Q96S82 380 aaPredicted RBP10.89□□□□□ -0.67
CCBE1-203ENST00000589116 MND1Q9BWT6 205 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 JAM3Q9BX67 310 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 OR11A1Q9GZK7 315 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 EXOGQ9Y2C4 368 aaKnown RBP10.89□□□□□ -0.67
CCBE1-203ENST00000589116 EXOSC1Q9Y3B2 195 aaKnown RBP10.89□□□□□ -0.67
CCBE1-203ENST00000589116 ADAM18Q9Y3Q7 739 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 FREM2Q5SZK8 3169 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 MYL12BO14950 172 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 TRIM3O75382 744 aaPredicted RBP10.89□□□□□ -0.67
CCBE1-203ENST00000589116 CBR3O75828 277 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 ZNF17P17021 662 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 SLC2A5P22732 501 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 ITGA3P26006 1051 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 GRPRP30550 384 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 IDUAP35475 653 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 RRADP55042 308 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 CTXN1P60606 82 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 C1DQ13901 141 aaKnown RBP10.89□□□□□ -0.67
CCBE1-203ENST00000589116 INPP5JQ15735 1006 aaPredicted RBP10.89□□□□□ -0.67
CCBE1-203ENST00000589116 TIGD6Q17RP2 521 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 MDGA2Q7Z553 956 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 ANKRD13BQ86YJ7 626 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 THAP4Q8WY91 577 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 PTP4A1Q93096 173 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 OTULINQ96BN8 352 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 SLC25A36Q96CQ1 311 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 COG8Q96MW5 612 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 NPAS1Q99742 590 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 FUNDC2Q9BWH2 189 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 TIMMDC1Q9NPL8 285 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 CHCHD3Q9NX63 227 aaKnown RBP10.89□□□□□ -0.67
CCBE1-203ENST00000589116 HAO2Q9NYQ3 351 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 STMN3Q9NZ72 180 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 PTTG2Q9NZH5 202 aa10.89□□□□□ -0.67
CCBE1-203ENST00000589116 TMEM129A0AVI4 362 aa10.88□□□□□ -0.67
CCBE1-203ENST00000589116 IGHMP01871 453 aa10.88□□□□□ -0.67
CCBE1-203ENST00000589116 IGHA1P01876 353 aa10.88□□□□□ -0.67
CCBE1-203ENST00000589116 ADRA2AP08913 450 aa10.88□□□□□ -0.67
CCBE1-203ENST00000589116 DPP4P27487 766 aa10.88□□□□□ -0.67
CCBE1-203ENST00000589116 GTF2E2P29084 291 aaKnown RBP10.88□□□□□ -0.67
CCBE1-203ENST00000589116 SH3BGRP55822 239 aaPredicted RBP10.88□□□□□ -0.67
CCBE1-203ENST00000589116 SOX8P57073 446 aa10.88□□□□□ -0.67
CCBE1-203ENST00000589116 ERVK-25P63136 954 aa10.88□□□□□ -0.67
CCBE1-203ENST00000589116 LGALS3BPQ08380 585 aa10.88□□□□□ -0.67
CCBE1-203ENST00000589116 POU4F2Q12837 409 aa10.88□□□□□ -0.67
CCBE1-203ENST00000589116 TGIF1Q15583 401 aa10.88□□□□□ -0.67
CCBE1-203ENST00000589116 GLYR1Q49A26 553 aaPredicted RBP10.88□□□□□ -0.67
CCBE1-203ENST00000589116 LCN1P1Q5VSP4 162 aa10.88□□□□□ -0.67
CCBE1-203ENST00000589116 SLC6A19Q695T7 634 aa10.88□□□□□ -0.67
CCBE1-203ENST00000589116 B3GNT6Q6ZMB0 384 aa10.88□□□□□ -0.67
CCBE1-203ENST00000589116 JAZF1Q86VZ6 243 aa10.88□□□□□ -0.67
CCBE1-203ENST00000589116 NANOGP1Q8N7R0 232 aa10.88□□□□□ -0.67
CCBE1-203ENST00000589116 LSM14AQ8ND56 463 aaKnown RBP10.88□□□□□ -0.67
CCBE1-203ENST00000589116 SDR9C7Q8NEX9 313 aa10.88□□□□□ -0.67
CCBE1-203ENST00000589116 OR4K13Q8NH42 304 aa10.88□□□□□ -0.67
CCBE1-203ENST00000589116 SLC39A7Q92504 469 aa10.88□□□□□ -0.67
CCBE1-203ENST00000589116 KISS1RQ969F8 398 aaPredicted RBP10.88□□□□□ -0.67
CCBE1-203ENST00000589116 C12orf43Q96C57 262 aaKnown RBP10.88□□□□□ -0.67
CCBE1-203ENST00000589116 YIPF6Q96EC8 236 aa10.88□□□□□ -0.67
CCBE1-203ENST00000589116 HCAR1Q9BXC0 346 aa10.88□□□□□ -0.67
CCBE1-203ENST00000589116 KLHL1Q9NR64 748 aa10.88□□□□□ -0.67
CCBE1-203ENST00000589116 INIPQ9NRY2 104 aa10.88□□□□□ -0.67
CCBE1-203ENST00000589116 ALKBH4Q9NXW9 302 aa10.88□□□□□ -0.67
CCBE1-203ENST00000589116 TAS2R16Q9NYV7 291 aa10.88□□□□□ -0.67
CCBE1-203ENST00000589116 TAS2R5Q9NYW4 299 aa10.88□□□□□ -0.67
CCBE1-203ENST00000589116 TNFRSF10DQ9UBN6 386 aa10.88□□□□□ -0.67
CCBE1-203ENST00000589116 ENPP5Q9UJA9 477 aa10.88□□□□□ -0.67
CCBE1-203ENST00000589116 LSM2Q9Y333 95 aaKnown RBP10.88□□□□□ -0.67
CCBE1-203ENST00000589116 TEX13CA0A0J9YWL9 993 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms