RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 PLA2G4DQ86XP0 818 aa2.36□□□□□ -2.03
SMAD4-207ENST00000589076 PNKDQ8N490 385 aa2.36□□□□□ -2.03
SMAD4-207ENST00000589076 DCAF4L2Q8NA75 395 aa2.36□□□□□ -2.03
SMAD4-207ENST00000589076 FNDC5Q8NAU1 212 aa2.36□□□□□ -2.03
SMAD4-207ENST00000589076 OR8J1Q8NGP2 316 aa2.36□□□□□ -2.03
SMAD4-207ENST00000589076 NT5C3BQ969T7 300 aa2.36□□□□□ -2.03
SMAD4-207ENST00000589076 ELSPBP1Q96BH3 223 aa2.36□□□□□ -2.03
SMAD4-207ENST00000589076 ITCHQ96J02 903 aa2.36□□□□□ -2.03
SMAD4-207ENST00000589076 IFT74Q96LB3 600 aa2.36□□□□□ -2.03
SMAD4-207ENST00000589076 TCEANC2Q96MN5 208 aa2.36□□□□□ -2.03
SMAD4-207ENST00000589076 ZNF641Q96N77 438 aaPredicted RBP2.36□□□□□ -2.03
SMAD4-207ENST00000589076 TSG101Q99816 390 aa2.36□□□□□ -2.03
SMAD4-207ENST00000589076 RIOK1Q9BRS2 568 aaKnown RBP2.36□□□□□ -2.03
SMAD4-207ENST00000589076 ACTR6Q9GZN1 396 aa2.36□□□□□ -2.03
SMAD4-207ENST00000589076 ANKRD19PQ9H560 264 aa2.36□□□□□ -2.03
SMAD4-207ENST00000589076 NANOGQ9H9S0 305 aa2.36□□□□□ -2.03
SMAD4-207ENST00000589076 GLRX2Q9NS18 164 aa2.36□□□□□ -2.03
SMAD4-207ENST00000589076 HOXC10Q9NYD6 342 aa2.36□□□□□ -2.03
SMAD4-207ENST00000589076 KCNIP1Q9NZI2 227 aa2.36□□□□□ -2.03
SMAD4-207ENST00000589076 COL16A1Q07092 1604 aaPredicted RBP2.35□□□□□ -2.03
SMAD4-207ENST00000589076 CDC42BPBQ9Y5S2 1711 aa2.35□□□□□ -2.03
SMAD4-207ENST00000589076 NSG1A0A0A6YYJ2 146 aa2.35□□□□□ -2.03
SMAD4-207ENST00000589076 FOXE1O00358 373 aaPredicted RBP2.35□□□□□ -2.03
SMAD4-207ENST00000589076 SLC2A3P11169 496 aa2.35□□□□□ -2.03
SMAD4-207ENST00000589076 HSD17B2P37059 387 aa2.35□□□□□ -2.03
SMAD4-207ENST00000589076 ATP5IP56385 69 aaPredicted RBP2.35□□□□□ -2.03
SMAD4-207ENST00000589076 PRPS1P60891 318 aa2.35□□□□□ -2.03
SMAD4-207ENST00000589076 ERVK-25P63136 954 aa2.35□□□□□ -2.03
SMAD4-207ENST00000589076 SCRN3Q0VDG4 424 aa2.35□□□□□ -2.03
SMAD4-207ENST00000589076 PSG7Q13046 419 aa2.35□□□□□ -2.03
SMAD4-207ENST00000589076 NRF1Q16656 503 aa2.35□□□□□ -2.03
SMAD4-207ENST00000589076 DGUOKQ16854 277 aa2.35□□□□□ -2.03
SMAD4-207ENST00000589076 RABL6Q3YEC7 729 aaPredicted RBP2.35□□□□□ -2.03
SMAD4-207ENST00000589076 BOLA3Q53S33 107 aa2.35□□□□□ -2.03
SMAD4-207ENST00000589076 CTSL3PQ5NE16 218 aa2.35□□□□□ -2.03
SMAD4-207ENST00000589076 PHYHD1Q5SRE7 291 aa2.35□□□□□ -2.03
SMAD4-207ENST00000589076 ENPP6Q6UWR7 440 aa2.35□□□□□ -2.03
SMAD4-207ENST00000589076 H2BFWTQ7Z2G1 175 aa2.35□□□□□ -2.03
SMAD4-207ENST00000589076 UBE2J2Q8N2K1 259 aa2.35□□□□□ -2.03
SMAD4-207ENST00000589076 LINC01555Q8NAE3 123 aa2.35□□□□□ -2.03
SMAD4-207ENST00000589076 C20orf203Q8NBC4 194 aa2.35□□□□□ -2.03
SMAD4-207ENST00000589076 PYROXD1Q8WU10 500 aa2.35□□□□□ -2.03
SMAD4-207ENST00000589076 RNF138Q8WVD3 245 aa2.35□□□□□ -2.03
SMAD4-207ENST00000589076 N4BP2L2Q92802 583 aaPredicted RBP2.35□□□□□ -2.03
SMAD4-207ENST00000589076 FBXO32Q969P5 355 aa2.35□□□□□ -2.03
SMAD4-207ENST00000589076 KCNA7Q96RP8 456 aa2.35□□□□□ -2.03
SMAD4-207ENST00000589076 CNN2Q99439 309 aaKnown RBP2.35□□□□□ -2.03
SMAD4-207ENST00000589076 NAT9Q9BTE0 207 aa2.35□□□□□ -2.03
SMAD4-207ENST00000589076 TRIM62Q9BVG3 475 aa2.35□□□□□ -2.03
SMAD4-207ENST00000589076 RIOK2Q9BVS4 552 aaKnown RBP2.35□□□□□ -2.03
SMAD4-207ENST00000589076 PKIBQ9C010 78 aa2.35□□□□□ -2.03
SMAD4-207ENST00000589076 GBA3Q9H227 469 aa2.35□□□□□ -2.03
SMAD4-207ENST00000589076 PPA2Q9H2U2 334 aa2.35□□□□□ -2.03
SMAD4-207ENST00000589076 NMRAL1Q9HBL8 299 aa2.35□□□□□ -2.03
SMAD4-207ENST00000589076 MMP26Q9NRE1 261 aa2.35□□□□□ -2.03
SMAD4-207ENST00000589076 GIN1Q9NXP7 522 aa2.35□□□□□ -2.03
SMAD4-207ENST00000589076 ANAPC11Q9NYG5 84 aa2.35□□□□□ -2.03
SMAD4-207ENST00000589076 RPS6KB2Q9UBS0 482 aa2.35□□□□□ -2.03
SMAD4-207ENST00000589076 SUN2Q9UH99 717 aa2.35□□□□□ -2.03
SMAD4-207ENST00000589076 KCNIP3Q9Y2W7 256 aa2.35□□□□□ -2.03
SMAD4-207ENST00000589076 ARHGAP21Q5T5U3 1957 aa2.35□□□□□ -2.03
SMAD4-207ENST00000589076 MEGF6O75095 1541 aa2.34□□□□□ -2.03
SMAD4-207ENST00000589076 TRIM49D1C9J1S8 452 aa2.34□□□□□ -2.03
SMAD4-207ENST00000589076 E9PBE3 544 aa2.34□□□□□ -2.03
SMAD4-207ENST00000589076 KRTAP4-16G5E9R7 235 aaPredicted RBP2.34□□□□□ -2.03
SMAD4-207ENST00000589076 HAS3O00219 553 aa2.34□□□□□ -2.03
SMAD4-207ENST00000589076 TOM1O60784 492 aa2.34□□□□□ -2.03
SMAD4-207ENST00000589076 NPIPB7O75200 414 aa2.34□□□□□ -2.03
SMAD4-207ENST00000589076 SNX4O95219 450 aa2.34□□□□□ -2.03
SMAD4-207ENST00000589076 NDUFB10O96000 172 aa2.34□□□□□ -2.03
SMAD4-207ENST00000589076 ABOP16442 354 aa2.34□□□□□ -2.03
SMAD4-207ENST00000589076 NCF2P19878 526 aaPredicted RBP2.34□□□□□ -2.03
SMAD4-207ENST00000589076 FDFT1P37268 417 aa2.34□□□□□ -2.03
SMAD4-207ENST00000589076 TAGLN2P37802 199 aaKnown RBP2.34□□□□□ -2.03
SMAD4-207ENST00000589076 VDAC2P45880 294 aaPredicted RBP2.34□□□□□ -2.03
SMAD4-207ENST00000589076 GSSP48637 474 aa2.34□□□□□ -2.03
SMAD4-207ENST00000589076 BST1Q10588 318 aa2.34□□□□□ -2.03
SMAD4-207ENST00000589076 MRPL28Q13084 256 aaKnown RBP2.34□□□□□ -2.03
SMAD4-207ENST00000589076 ZNF77Q15935 545 aa2.34□□□□□ -2.03
SMAD4-207ENST00000589076 SSX2Q16385 188 aa2.34□□□□□ -2.03
SMAD4-207ENST00000589076 PRAMEF5Q5TYX0 476 aa2.34□□□□□ -2.03
SMAD4-207ENST00000589076 GPR157Q5UAW9 335 aa2.34□□□□□ -2.03
SMAD4-207ENST00000589076 PRAMEF6Q5VXH4 476 aa2.34□□□□□ -2.03
SMAD4-207ENST00000589076 LRRC31Q6UY01 552 aa2.34□□□□□ -2.03
SMAD4-207ENST00000589076 NANOGNBQ7Z5D8 188 aa2.34□□□□□ -2.03
SMAD4-207ENST00000589076 PAQR7Q86WK9 346 aa2.34□□□□□ -2.03
SMAD4-207ENST00000589076 TPRX1Q8N7U7 411 aa2.34□□□□□ -2.03
SMAD4-207ENST00000589076 NECAB1Q8N987 351 aa2.34□□□□□ -2.03
SMAD4-207ENST00000589076 SUMF2Q8NBJ7 301 aa2.34□□□□□ -2.03
SMAD4-207ENST00000589076 FAM151AQ8WW52 585 aa2.34□□□□□ -2.03
SMAD4-207ENST00000589076 ACOT11Q8WXI4 607 aaPredicted RBP2.34□□□□□ -2.03
SMAD4-207ENST00000589076 STMN2Q93045 179 aa2.34□□□□□ -2.03
SMAD4-207ENST00000589076 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.34□□□□□ -2.03
SMAD4-207ENST00000589076 TPD52L3Q96J77 140 aa2.34□□□□□ -2.03
SMAD4-207ENST00000589076 NRTNQ99748 197 aa2.34□□□□□ -2.03
SMAD4-207ENST00000589076 ROPN1BQ9BZX4 212 aaPredicted RBP2.34□□□□□ -2.03
SMAD4-207ENST00000589076 OR11A1Q9GZK7 315 aa2.34□□□□□ -2.03
SMAD4-207ENST00000589076 ROGDIQ9GZN7 287 aa2.34□□□□□ -2.03
SMAD4-207ENST00000589076 MFFQ9GZY8 342 aa2.34□□□□□ -2.03
SMAD4-207ENST00000589076 RANBP3Q9H6Z4 567 aaPredicted RBP2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms