RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 TMEM129A0AVI4 362 aa12.17□□□□□ -0.46
DNMT1-213ENST00000587604 FTCDNL1E5RQL4 147 aa12.17□□□□□ -0.46
DNMT1-213ENST00000587604 ZNF432O94892 652 aa12.17□□□□□ -0.46
DNMT1-213ENST00000587604 ZNF43P17038 809 aa12.17□□□□□ -0.46
DNMT1-213ENST00000587604 NCF2P19878 526 aaPredicted RBP12.17□□□□□ -0.46
DNMT1-213ENST00000587604 APEX1P27695 318 aaKnown RBP12.17□□□□□ -0.46
DNMT1-213ENST00000587604 ARR3P36575 388 aa12.17□□□□□ -0.46
DNMT1-213ENST00000587604 MVDP53602 400 aa12.17□□□□□ -0.46
DNMT1-213ENST00000587604 CRISP3P54108 245 aa12.17□□□□□ -0.46
DNMT1-213ENST00000587604 VSNL1P62760 191 aa12.17□□□□□ -0.46
DNMT1-213ENST00000587604 ARF1P84077 181 aaKnown RBP12.17□□□□□ -0.46
DNMT1-213ENST00000587604 LARS2Q15031 903 aaKnown RBP12.17□□□□□ -0.46
DNMT1-213ENST00000587604 UGT2A3Q6UWM9 527 aa12.17□□□□□ -0.46
DNMT1-213ENST00000587604 SPATA21Q7Z572 469 aa12.17□□□□□ -0.46
DNMT1-213ENST00000587604 ZCCHC24Q8N2G6 241 aaKnown RBP12.17□□□□□ -0.46
DNMT1-213ENST00000587604 KDM8Q8N371 416 aa12.17□□□□□ -0.46
DNMT1-213ENST00000587604 CLIP4Q8N3C7 705 aa12.17□□□□□ -0.46
DNMT1-213ENST00000587604 SVOPLQ8N434 492 aa12.17□□□□□ -0.46
DNMT1-213ENST00000587604 GLB1L3Q8NCI6 653 aaPredicted RBP12.17□□□□□ -0.46
DNMT1-213ENST00000587604 IL17RDQ8NFM7 739 aa12.17□□□□□ -0.46
DNMT1-213ENST00000587604 SLC38A5Q8WUX1 472 aa12.17□□□□□ -0.46
DNMT1-213ENST00000587604 ZBTB18Q99592 522 aa12.17□□□□□ -0.46
DNMT1-213ENST00000587604 ARMC7Q9H6L4 198 aa12.17□□□□□ -0.46
DNMT1-213ENST00000587604 SSU72Q9NP77 194 aaKnown RBP12.17□□□□□ -0.46
DNMT1-213ENST00000587604 PNPOQ9NVS9 261 aa12.17□□□□□ -0.46
DNMT1-213ENST00000587604 RCE1Q9Y256 329 aa12.17□□□□□ -0.46
DNMT1-213ENST00000587604 ZNF443Q9Y2A4 671 aaPredicted RBP12.17□□□□□ -0.46
DNMT1-213ENST00000587604 GPR45Q9Y5Y3 372 aa12.17□□□□□ -0.46
DNMT1-213ENST00000587604 RFXANKO14593 260 aa12.16□□□□□ -0.46
DNMT1-213ENST00000587604 TM9SF1O15321 606 aa12.16□□□□□ -0.46
DNMT1-213ENST00000587604 AHSA1O95433 338 aa12.16□□□□□ -0.46
DNMT1-213ENST00000587604 CELA3BP08861 270 aa12.16□□□□□ -0.46
DNMT1-213ENST00000587604 PNMTP11086 282 aa12.16□□□□□ -0.46
DNMT1-213ENST00000587604 PRG2P13727 222 aa12.16□□□□□ -0.46
DNMT1-213ENST00000587604 IL2RGP31785 369 aa12.16□□□□□ -0.46
DNMT1-213ENST00000587604 SRP14P37108 136 aaKnown RBP12.16□□□□□ -0.46
DNMT1-213ENST00000587604 CLDN17P56750 224 aa12.16□□□□□ -0.46
DNMT1-213ENST00000587604 STX3Q13277 289 aa12.16□□□□□ -0.46
DNMT1-213ENST00000587604 RIN1Q13671 783 aa12.16□□□□□ -0.46
DNMT1-213ENST00000587604 MYPOPQ86VE0 399 aaPredicted RBP12.16□□□□□ -0.46
DNMT1-213ENST00000587604 CCDC36Q8IYA8 594 aa12.16□□□□□ -0.46
DNMT1-213ENST00000587604 UBASH3BQ8TF42 649 aa12.16□□□□□ -0.46
DNMT1-213ENST00000587604 AENQ8WTP8 325 aaKnown RBP12.16□□□□□ -0.46
DNMT1-213ENST00000587604 SLC25A36Q96CQ1 311 aa12.16□□□□□ -0.46
DNMT1-213ENST00000587604 C1orf159Q96HA4 380 aa12.16□□□□□ -0.46
DNMT1-213ENST00000587604 OXGR1Q96P68 337 aa12.16□□□□□ -0.46
DNMT1-213ENST00000587604 SNX18Q96RF0 628 aa12.16□□□□□ -0.46
DNMT1-213ENST00000587604 PTDSS2Q9BVG9 487 aa12.16□□□□□ -0.46
DNMT1-213ENST00000587604 GPR35Q9HC97 309 aa12.16□□□□□ -0.46
DNMT1-213ENST00000587604 CHST2Q9Y4C5 530 aa12.16□□□□□ -0.46
DNMT1-213ENST00000587604 TENM1Q9UKZ4 2725 aa12.16□□□□□ -0.46
DNMT1-213ENST00000587604 DYSFO75923 2080 aa12.15□□□□□ -0.46
DNMT1-213ENST00000587604 IGHV2OR16-5A0A0B4J2B6 119 aa12.15□□□□□ -0.46
DNMT1-213ENST00000587604 A0A0G2JPF8 293 aa12.15□□□□□ -0.46
DNMT1-213ENST00000587604 SH3PXD2BA1X283 911 aa12.15□□□□□ -0.46
DNMT1-213ENST00000587604 HNRNPCL2B2RXH8 293 aa12.15□□□□□ -0.46
DNMT1-213ENST00000587604 HNRNPCL3B7ZW38 293 aa12.15□□□□□ -0.46
DNMT1-213ENST00000587604 SDHDO14521 159 aa12.15□□□□□ -0.46
DNMT1-213ENST00000587604 HNRNPCL1O60812 293 aaKnown RBP12.15□□□□□ -0.46
DNMT1-213ENST00000587604 SLC43A1O75387 559 aa12.15□□□□□ -0.46
DNMT1-213ENST00000587604 IL6P05231 212 aa12.15□□□□□ -0.46
DNMT1-213ENST00000587604 BCHEP06276 602 aa12.15□□□□□ -0.46
DNMT1-213ENST00000587604 HNRNPCL4P0DMR1 293 aa12.15□□□□□ -0.46
DNMT1-213ENST00000587604 ETFAP13804 333 aa12.15□□□□□ -0.46
DNMT1-213ENST00000587604 IFNGR1P15260 489 aa12.15□□□□□ -0.46
DNMT1-213ENST00000587604 BGNP21810 368 aa12.15□□□□□ -0.46
DNMT1-213ENST00000587604 GTF2E2P29084 291 aaKnown RBP12.15□□□□□ -0.46
DNMT1-213ENST00000587604 CRATP43155 626 aa12.15□□□□□ -0.46
DNMT1-213ENST00000587604 RPS5P46782 204 aaKnown RBP12.15□□□□□ -0.46
DNMT1-213ENST00000587604 CDH15P55291 814 aa12.15□□□□□ -0.46
DNMT1-213ENST00000587604 DSTNP60981 165 aa12.15□□□□□ -0.46
DNMT1-213ENST00000587604 POU3F1Q03052 451 aaPredicted RBP12.15□□□□□ -0.46
DNMT1-213ENST00000587604 EGR4Q05215 589 aa12.15□□□□□ -0.46
DNMT1-213ENST00000587604 ADRM1Q16186 407 aa12.15□□□□□ -0.46
DNMT1-213ENST00000587604 ATG16L1Q676U5 607 aa12.15□□□□□ -0.46
DNMT1-213ENST00000587604 SERPINA11Q86U17 422 aa12.15□□□□□ -0.46
DNMT1-213ENST00000587604 GPR137CQ8N3F9 429 aa12.15□□□□□ -0.46
DNMT1-213ENST00000587604 CKAP2Q8WWK9 683 aa12.15□□□□□ -0.46
DNMT1-213ENST00000587604 KTI12Q96EK9 354 aaPredicted RBP12.15□□□□□ -0.46
DNMT1-213ENST00000587604 SPATA9Q9BWV2 254 aa12.15□□□□□ -0.46
DNMT1-213ENST00000587604 CACYBPQ9HB71 228 aaKnown RBP12.15□□□□□ -0.46
DNMT1-213ENST00000587604 CRLF2Q9HC73 371 aa12.15□□□□□ -0.46
DNMT1-213ENST00000587604 DYNLRB1Q9NP97 96 aa12.15□□□□□ -0.46
DNMT1-213ENST00000587604 SLC6A13Q9NSD5 602 aa12.15□□□□□ -0.46
DNMT1-213ENST00000587604 THUMPD1Q9NXG2 353 aaKnown RBP12.15□□□□□ -0.46
DNMT1-213ENST00000587604 B3GAT1Q9P2W7 334 aa12.15□□□□□ -0.46
DNMT1-213ENST00000587604 IFT52Q9Y366 437 aa12.15□□□□□ -0.46
DNMT1-213ENST00000587604 LOC102725191A0A1B0GVB3 256 aa12.14□□□□□ -0.47
DNMT1-213ENST00000587604 TMEM247A6NEH6 219 aa12.14□□□□□ -0.47
DNMT1-213ENST00000587604 ZNF503-AS2A6NEH8 195 aa12.14□□□□□ -0.47
DNMT1-213ENST00000587604 RGS16O15492 202 aaPredicted RBP12.14□□□□□ -0.47
DNMT1-213ENST00000587604 OR2T1O43869 369 aa12.14□□□□□ -0.47
DNMT1-213ENST00000587604 FZD7O75084 574 aa12.14□□□□□ -0.47
DNMT1-213ENST00000587604 IGFBP1P08833 259 aaPredicted RBP12.14□□□□□ -0.47
DNMT1-213ENST00000587604 ADRA2AP08913 450 aa12.14□□□□□ -0.47
DNMT1-213ENST00000587604 ZCCHC18P0CG32 403 aa12.14□□□□□ -0.47
DNMT1-213ENST00000587604 ITGA2P17301 1181 aa12.14□□□□□ -0.47
DNMT1-213ENST00000587604 PCMT1P22061 227 aa12.14□□□□□ -0.47
DNMT1-213ENST00000587604 DVL1P1P54792 670 aaPredicted RBP12.14□□□□□ -0.47
DNMT1-213ENST00000587604 NPRL3Q12980 569 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms