RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 EFNB1P98172 346 aa13.38□□□□□ -0.27
NFIX-208ENST00000587260 PDK3Q15120 406 aa13.38□□□□□ -0.27
NFIX-208ENST00000587260 OR7A5Q15622 319 aa13.38□□□□□ -0.27
NFIX-208ENST00000587260 ZNF239Q16600 458 aaKnown RBP13.38□□□□□ -0.27
NFIX-208ENST00000587260 CTU2Q2VPK5 515 aaKnown RBP13.38□□□□□ -0.27
NFIX-208ENST00000587260 TMEM236Q5W0B7 351 aa13.38□□□□□ -0.27
NFIX-208ENST00000587260 VASNQ6EMK4 673 aa13.38□□□□□ -0.27
NFIX-208ENST00000587260 ACSM5Q6NUN0 579 aa13.38□□□□□ -0.27
NFIX-208ENST00000587260 ARHGAP11AQ6P4F7 1023 aa13.38□□□□□ -0.27
NFIX-208ENST00000587260 THSD4Q6ZMP0 1018 aa13.38□□□□□ -0.27
NFIX-208ENST00000587260 HIST3H2AQ7L7L0 130 aa13.38□□□□□ -0.27
NFIX-208ENST00000587260 DEPDC4Q8N2C3 294 aa13.38□□□□□ -0.27
NFIX-208ENST00000587260 GHDCQ8N2G8 530 aa13.38□□□□□ -0.27
NFIX-208ENST00000587260 LNX2Q8N448 690 aa13.38□□□□□ -0.27
NFIX-208ENST00000587260 OR2T33Q8NG76 320 aa13.38□□□□□ -0.27
NFIX-208ENST00000587260 OR52L1Q8NGH7 329 aa13.38□□□□□ -0.27
NFIX-208ENST00000587260 HIST1H2ACQ93077 130 aa13.38□□□□□ -0.27
NFIX-208ENST00000587260 SLC25A36Q96CQ1 311 aa13.38□□□□□ -0.27
NFIX-208ENST00000587260 CNBD2Q96M20 576 aa13.38□□□□□ -0.27
NFIX-208ENST00000587260 BBC3Q96PG8 261 aaPredicted RBP13.38□□□□□ -0.27
NFIX-208ENST00000587260 TIMP4Q99727 224 aa13.38□□□□□ -0.27
NFIX-208ENST00000587260 SLX1AQ9BQ83 275 aa13.38□□□□□ -0.27
NFIX-208ENST00000587260 TAPBPLQ9BX59 468 aa13.38□□□□□ -0.27
NFIX-208ENST00000587260 ASPNQ9BXN1 380 aa13.38□□□□□ -0.27
NFIX-208ENST00000587260 ENKD1Q9H0I2 346 aa13.38□□□□□ -0.27
NFIX-208ENST00000587260 FANCFQ9NPI8 374 aa13.38□□□□□ -0.27
NFIX-208ENST00000587260 TBC1D23Q9NUY8 699 aa13.38□□□□□ -0.27
NFIX-208ENST00000587260 ALKBH4Q9NXW9 302 aa13.38□□□□□ -0.27
NFIX-208ENST00000587260 TAS2R5Q9NYW4 299 aa13.38□□□□□ -0.27
NFIX-208ENST00000587260 CAMK2AQ9UQM7 478 aa13.38□□□□□ -0.27
NFIX-208ENST00000587260 A0A1B0GVC2 190 aa13.37□□□□□ -0.27
NFIX-208ENST00000587260 ARPC3O15145 178 aa13.37□□□□□ -0.27
NFIX-208ENST00000587260 DNPH1O43598 174 aa13.37□□□□□ -0.27
NFIX-208ENST00000587260 HMGN1P05114 100 aa13.37□□□□□ -0.27
NFIX-208ENST00000587260 APEHP13798 732 aaKnown RBP13.37□□□□□ -0.27
NFIX-208ENST00000587260 EIF1AXP47813 144 aaKnown RBP13.37□□□□□ -0.27
NFIX-208ENST00000587260 CLDN15P56746 228 aa13.37□□□□□ -0.27
NFIX-208ENST00000587260 ZP4Q12836 540 aa13.37□□□□□ -0.27
NFIX-208ENST00000587260 BCL2A1Q16548 175 aa13.37□□□□□ -0.27
NFIX-208ENST00000587260 GXYLT1Q4G148 440 aa13.37□□□□□ -0.27
NFIX-208ENST00000587260 HBMQ6B0K9 141 aa13.37□□□□□ -0.27
NFIX-208ENST00000587260 DPY19L2P2Q6ZN68 376 aa13.37□□□□□ -0.27
NFIX-208ENST00000587260 ESPNLQ6ZVH7 1005 aa13.37□□□□□ -0.27
NFIX-208ENST00000587260 NANOGNBQ7Z5D8 188 aa13.37□□□□□ -0.27
NFIX-208ENST00000587260 FGD2Q7Z6J4 655 aa13.37□□□□□ -0.27
NFIX-208ENST00000587260 MEIOBQ8N635 442 aa13.37□□□□□ -0.27
NFIX-208ENST00000587260 ADPRHL1Q8NDY3 354 aa13.37□□□□□ -0.27
NFIX-208ENST00000587260 OR4Q3Q8NH05 313 aa13.37□□□□□ -0.27
NFIX-208ENST00000587260 RHOXF1Q8NHV9 184 aa13.37□□□□□ -0.27
NFIX-208ENST00000587260 CPT1CQ8TCG5 803 aa13.37□□□□□ -0.27
NFIX-208ENST00000587260 NR1H4Q96RI1 486 aaPredicted RBP13.37□□□□□ -0.27
NFIX-208ENST00000587260 TEX12Q9BXU0 123 aa13.37□□□□□ -0.27
NFIX-208ENST00000587260 NRIP3Q9NQ35 241 aa13.37□□□□□ -0.27
NFIX-208ENST00000587260 SEC14L4Q9UDX3 406 aa13.37□□□□□ -0.27
NFIX-208ENST00000587260 B3GALT5Q9Y2C3 310 aa13.37□□□□□ -0.27
NFIX-208ENST00000587260 SVILO95425 2214 aa13.36□□□□□ -0.27
NFIX-208ENST00000587260 BLOC1S5-TXNDC5H3BN57 136 aa13.36□□□□□ -0.27
NFIX-208ENST00000587260 M0R082 166 aa13.36□□□□□ -0.27
NFIX-208ENST00000587260 SULT2B1O00204 365 aa13.36□□□□□ -0.27
NFIX-208ENST00000587260 PLPP3O14495 311 aa13.36□□□□□ -0.27
NFIX-208ENST00000587260 CXCL13O43927 109 aa13.36□□□□□ -0.27
NFIX-208ENST00000587260 MPZL2O60487 215 aa13.36□□□□□ -0.27
NFIX-208ENST00000587260 GABRB1P18505 474 aa13.36□□□□□ -0.27
NFIX-208ENST00000587260 GTF2E2P29084 291 aaKnown RBP13.36□□□□□ -0.27
NFIX-208ENST00000587260 GRK5P34947 590 aa13.36□□□□□ -0.27
NFIX-208ENST00000587260 AQP2P41181 271 aa13.36□□□□□ -0.27
NFIX-208ENST00000587260 DIO1P49895 249 aa13.36□□□□□ -0.27
NFIX-208ENST00000587260 OR2B6P58173 313 aa13.36□□□□□ -0.27
NFIX-208ENST00000587260 SLC35A1P78382 337 aa13.36□□□□□ -0.27
NFIX-208ENST00000587260 H3F3AP84243 136 aa13.36□□□□□ -0.27
NFIX-208ENST00000587260 TEKQ02763 1124 aa13.36□□□□□ -0.27
NFIX-208ENST00000587260 RPL18Q07020 188 aaKnown RBP13.36□□□□□ -0.27
NFIX-208ENST00000587260 CD47Q08722 323 aa13.36□□□□□ -0.27
NFIX-208ENST00000587260 PGGHGQ32M88 737 aa13.36□□□□□ -0.27
NFIX-208ENST00000587260 CLEC12AQ5QGZ9 265 aa13.36□□□□□ -0.27
NFIX-208ENST00000587260 CASP12Q6UXS9 341 aa13.36□□□□□ -0.27
NFIX-208ENST00000587260 GFRALQ6UXV0 394 aa13.36□□□□□ -0.27
NFIX-208ENST00000587260 H1FNTQ75WM6 255 aaPredicted RBP13.36□□□□□ -0.27
NFIX-208ENST00000587260 ENTHD1Q8IYW4 607 aa13.36□□□□□ -0.27
NFIX-208ENST00000587260 IQCF1Q8N6M8 205 aa13.36□□□□□ -0.27
NFIX-208ENST00000587260 OR5M9Q8NGP3 310 aa13.36□□□□□ -0.27
NFIX-208ENST00000587260 OR10D3Q8NH80 312 aa13.36□□□□□ -0.27
NFIX-208ENST00000587260 OR2V1Q8NHB1 315 aa13.36□□□□□ -0.27
NFIX-208ENST00000587260 ZNF417Q8TAU3 575 aa13.36□□□□□ -0.27
NFIX-208ENST00000587260 FAM81AQ8TBF8 368 aa13.36□□□□□ -0.27
NFIX-208ENST00000587260 SARAFQ96BY9 339 aa13.36□□□□□ -0.27
NFIX-208ENST00000587260 WDYHV1Q96HA8 205 aa13.36□□□□□ -0.27
NFIX-208ENST00000587260 ZNF845Q96IR2 970 aaPredicted RBP13.36□□□□□ -0.27
NFIX-208ENST00000587260 ADGRG7Q96K78 797 aa13.36□□□□□ -0.27
NFIX-208ENST00000587260 ZNF587Q96SQ5 575 aaPredicted RBP13.36□□□□□ -0.27
NFIX-208ENST00000587260 POLDIP3Q9BY77 421 aaKnown RBP13.36□□□□□ -0.27
NFIX-208ENST00000587260 SRXN1Q9BYN0 137 aa13.36□□□□□ -0.27
NFIX-208ENST00000587260 PRRG3Q9BZD7 231 aa13.36□□□□□ -0.27
NFIX-208ENST00000587260 NDEL1Q9GZM8 345 aa13.36□□□□□ -0.27
NFIX-208ENST00000587260 ZFYVE26Q68DK2 2539 aa13.36□□□□□ -0.27
NFIX-208ENST00000587260 IGHV3-15A0A0B4J1V0 119 aa13.35□□□□□ -0.27
NFIX-208ENST00000587260 IDH3BO43837 385 aa13.35□□□□□ -0.27
NFIX-208ENST00000587260 PRB1P04280 392 aa13.35□□□□□ -0.27
NFIX-208ENST00000587260 KLK2P20151 261 aa13.35□□□□□ -0.27
NFIX-208ENST00000587260 SNRPGP62308 76 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms