RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 PCDHGB5Q9Y5G0 923 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 PCDHGB1Q9Y5G3 927 aa7.06□□□□□ -1.28
VMP1-204ENST00000587259 NSD1Q96L73 2696 aaPredicted RBP7.05□□□□□ -1.28
VMP1-204ENST00000587259 GXYLT2A0PJZ3 443 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 OR14I1A6ND48 311 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 EFCAB10A6NFE3 127 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 CCDC160A6NGH7 325 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 SERINC4A6NH21 518 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 RGS10O43665 173 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 PPM1BO75688 479 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 CSTAP01040 98 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 IGF2P01344 180 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 PNMTP11086 282 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 PIPP12273 146 aaPredicted RBP7.05□□□□□ -1.28
VMP1-204ENST00000587259 CHMP24386 653 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 ELK4P28324 431 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 PCSK6P29122 969 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 RFX3P48380 749 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 GSSP48637 474 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 ZNF136P52737 540 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 PNLIPRP2P54317 469 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 SNRPGP62308 76 aaKnown RBP7.05□□□□□ -1.28
VMP1-204ENST00000587259 SLC35A2P78381 396 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 EFR3AQ14156 821 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 EBPQ15125 230 aaKnown RBP7.05□□□□□ -1.28
VMP1-204ENST00000587259 SEC23BQ15437 767 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 OR1Q1Q15612 314 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 CTU2Q2VPK5 515 aaKnown RBP7.05□□□□□ -1.28
VMP1-204ENST00000587259 DEFB113Q30KQ7 82 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 SLC25A35Q3KQZ1 300 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 PDZK1Q5T2W1 519 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 RIPPLY2Q5TAB7 128 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 SLX4IPQ5VYV7 408 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 ULK3Q6PHR2 472 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 CLEC9AQ6UXN8 241 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 NPSR1Q6W5P4 371 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 PTCHD4Q6ZW05 846 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 PRSS48Q7RTY5 328 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 SATL1Q86VE3 508 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 RBM45Q8IUH3 476 aaKnown RBP7.05□□□□□ -1.28
VMP1-204ENST00000587259 ENTHD1Q8IYW4 607 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 CLIP4Q8N3C7 705 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 ZNF540Q8NDQ6 660 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 BPIFB6Q8NFQ5 453 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 OR10G3Q8NGC4 313 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 OR52L1Q8NGH7 329 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 OR5L2Q8NGL0 311 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 ZNF721Q8TF20 911 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 SLC19A3Q9BZV2 496 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 WWTR1Q9GZV5 400 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 RACGAP1Q9H0H5 632 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 DUSP21Q9H596 190 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 ZNF703Q9H7S9 590 aaPredicted RBP7.05□□□□□ -1.28
VMP1-204ENST00000587259 C12orf10Q9HB07 376 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 SH2D2AQ9NP31 389 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 RLIMQ9NVW2 624 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 RSL24D1Q9UHA3 163 aaKnown RBP7.05□□□□□ -1.28
VMP1-204ENST00000587259 SLC7A7Q9UM01 511 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 BAIAP2Q9UQB8 552 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 SLC6A5Q9Y345 797 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 MED31Q9Y3C7 131 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 COMMD3-BMI1R4GMX3 469 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 MED12Q93074 2177 aa7.05□□□□□ -1.28
VMP1-204ENST00000587259 A0A087WUU8 490 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 A0A0B4J2E0 115 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 A0A1B0GX12 115 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 OR6C70A6NIJ9 312 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 CLCA1A8K7I4 914 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 EEF1E1-BLOC1S5C9J1V9 151 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 CDK2AP1O14519 115 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 SMAD7O15105 426 aaKnown RBP7.04□□□□□ -1.28
VMP1-204ENST00000587259 ZNF264O43296 627 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 EEF1E1O43324 174 aaKnown RBP7.04□□□□□ -1.28
VMP1-204ENST00000587259 SUSD5O60279 629 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 WDR1O75083 606 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 RCBTB2O95199 551 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 LY6G6DO95868 133 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 RAF1P04049 648 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 CLPSP04118 112 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 HMGN1P05114 100 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 INHBBP09529 407 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 LINGO3P0C6S8 592 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 UBL4AP11441 157 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 POU2F1P14859 743 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 NAGAP17050 411 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 BMP7P18075 431 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 TBXA2RP21731 343 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 HOXC12P31275 282 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 CTBP2P56545 445 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 PLCXD2Q0VAA5 305 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 TBCEQ15813 527 aaPredicted RBP7.04□□□□□ -1.28
VMP1-204ENST00000587259 MAPK14Q16539 360 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 ZNF791Q3KP31 576 aaPredicted RBP7.04□□□□□ -1.28
VMP1-204ENST00000587259 ANKDD1AQ495B1 522 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 ACSF3Q4G176 576 aaPredicted RBP7.04□□□□□ -1.28
VMP1-204ENST00000587259 KLHL26Q53HC5 615 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 ALG10BQ5I7T1 473 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 TMEM201Q5SNT2 666 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 SLC25A30Q5SVS4 291 aa7.04□□□□□ -1.28
VMP1-204ENST00000587259 C12orf73Q69YU5 71 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms