RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 CECR9P0C854 216 aa12.18□□□□□ -0.46
ATG4D-206ENST00000586863 HNRNPCL4P0DMR1 293 aa12.18□□□□□ -0.46
ATG4D-206ENST00000586863 PNMTP11086 282 aa12.18□□□□□ -0.46
ATG4D-206ENST00000586863 PDLIM4P50479 330 aa12.18□□□□□ -0.46
ATG4D-206ENST00000586863 UBE2NP61088 152 aaKnown RBP12.18□□□□□ -0.46
ATG4D-206ENST00000586863 SNRPD2P62316 118 aaKnown RBP12.18□□□□□ -0.46
ATG4D-206ENST00000586863 LSM11P83369 360 aaKnown RBP eCLIP12.18□□□□□ -0.462e-15■□□□□ 8.5
ATG4D-206ENST00000586863 GGTLC2Q14390 218 aa12.18□□□□□ -0.46
ATG4D-206ENST00000586863 ZSWIM7Q19AV6 140 aa12.18□□□□□ -0.46
ATG4D-206ENST00000586863 CYB5R2Q6BCY4 276 aa12.18□□□□□ -0.46
ATG4D-206ENST00000586863 MSANTD1Q6ZTZ1 278 aa12.18□□□□□ -0.46
ATG4D-206ENST00000586863 ARIH2OSQ8N7S6 290 aa12.18□□□□□ -0.46
ATG4D-206ENST00000586863 ANKS4BQ8N8V4 417 aa12.18□□□□□ -0.46
ATG4D-206ENST00000586863 STK35Q8TDR2 534 aa12.18□□□□□ -0.46
ATG4D-206ENST00000586863 TMEM158Q8WZ71 300 aa12.18□□□□□ -0.46
ATG4D-206ENST00000586863 MAL2Q969L2 176 aa12.18□□□□□ -0.46
ATG4D-206ENST00000586863 SLC25A36Q96CQ1 311 aa12.18□□□□□ -0.46
ATG4D-206ENST00000586863 KCNS3Q9BQ31 491 aa12.18□□□□□ -0.46
ATG4D-206ENST00000586863 KATNB1Q9BVA0 655 aa12.18□□□□□ -0.46
ATG4D-206ENST00000586863 RSPO3Q9BXY4 272 aaPredicted RBP12.18□□□□□ -0.46
ATG4D-206ENST00000586863 RMND5AQ9H871 391 aa12.18□□□□□ -0.46
ATG4D-206ENST00000586863 MED4Q9NPJ6 270 aa12.18□□□□□ -0.46
ATG4D-206ENST00000586863 B3GAT1Q9P2W7 334 aa12.18□□□□□ -0.46
ATG4D-206ENST00000586863 CRNNQ9UBG3 495 aaPredicted RBP12.18□□□□□ -0.46
ATG4D-206ENST00000586863 PRDM4Q9UKN5 801 aa12.18□□□□□ -0.46
ATG4D-206ENST00000586863 FKBP7Q9Y680 259 aa12.18□□□□□ -0.46
ATG4D-206ENST00000586863 ZNF432O94892 652 aa12.17□□□□□ -0.46
ATG4D-206ENST00000586863 IGLV1-44P01699 117 aa12.17□□□□□ -0.46
ATG4D-206ENST00000586863 CRYAAP02489 173 aa12.17□□□□□ -0.46
ATG4D-206ENST00000586863 CELA3BP08861 270 aa12.17□□□□□ -0.46
ATG4D-206ENST00000586863 IGFBP5P24593 272 aa12.17□□□□□ -0.46
ATG4D-206ENST00000586863 CALCRP30988 508 aa12.17□□□□□ -0.46
ATG4D-206ENST00000586863 SERPINF1P36955 418 aa12.17□□□□□ -0.46
ATG4D-206ENST00000586863 NR4A2P43354 598 aa12.17□□□□□ -0.46
ATG4D-206ENST00000586863 RPS5P46782 204 aaKnown RBP12.17□□□□□ -0.46
ATG4D-206ENST00000586863 POLR2JP52435 117 aaKnown RBP12.17□□□□□ -0.46
ATG4D-206ENST00000586863 CLDN17P56750 224 aa12.17□□□□□ -0.46
ATG4D-206ENST00000586863 ROR2Q01974 943 aaKnown RBP12.17□□□□□ -0.46
ATG4D-206ENST00000586863 NAAAQ02083 359 aa12.17□□□□□ -0.46
ATG4D-206ENST00000586863 ADIPOQQ15848 244 aa12.17□□□□□ -0.46
ATG4D-206ENST00000586863 ZNF311Q5JNZ3 666 aa12.17□□□□□ -0.46
ATG4D-206ENST00000586863 ANKRD16Q6P6B7 361 aa12.17□□□□□ -0.46
ATG4D-206ENST00000586863 SLC2A7Q6PXP3 512 aa12.17□□□□□ -0.46
ATG4D-206ENST00000586863 VHLLQ6RSH7 139 aa12.17□□□□□ -0.46
ATG4D-206ENST00000586863 SLC46A3Q7Z3Q1 461 aa12.17□□□□□ -0.46
ATG4D-206ENST00000586863 MYPOPQ86VE0 399 aaPredicted RBP12.17□□□□□ -0.46
ATG4D-206ENST00000586863 COMTD1Q86VU5 262 aa12.17□□□□□ -0.46
ATG4D-206ENST00000586863 MFSD8Q8NHS3 518 aa12.17□□□□□ -0.46
ATG4D-206ENST00000586863 MAGEE2Q8TD90 523 aaPredicted RBP12.17□□□□□ -0.46
ATG4D-206ENST00000586863 GTF2H4Q92759 462 aa12.17□□□□□ -0.46
ATG4D-206ENST00000586863 KTI12Q96EK9 354 aaPredicted RBP12.17□□□□□ -0.46
ATG4D-206ENST00000586863 ZNF317Q96PQ6 595 aaPredicted RBP12.17□□□□□ -0.46
ATG4D-206ENST00000586863 PIMREGQ9BSJ6 248 aa12.17□□□□□ -0.46
ATG4D-206ENST00000586863 PRR14Q9BWN1 585 aa12.17□□□□□ -0.46
ATG4D-206ENST00000586863 BEX2Q9BXY8 128 aa12.17□□□□□ -0.46
ATG4D-206ENST00000586863 LINC00470Q9BZP3 86 aa12.17□□□□□ -0.46
ATG4D-206ENST00000586863 PAIP1Q9H074 479 aaKnown RBP12.17□□□□□ -0.46
ATG4D-206ENST00000586863 CACYBPQ9HB71 228 aaKnown RBP12.17□□□□□ -0.46
ATG4D-206ENST00000586863 THUMPD1Q9NXG2 353 aaKnown RBP12.17□□□□□ -0.46
ATG4D-206ENST00000586863 ZNF232Q9UNY5 417 aa12.17□□□□□ -0.46
ATG4D-206ENST00000586863 IFT52Q9Y366 437 aa12.17□□□□□ -0.46
ATG4D-206ENST00000586863 PCDHB14Q9Y5E9 798 aa12.17□□□□□ -0.46
ATG4D-206ENST00000586863 IGHV4-61A0A0C4DH41 118 aa12.16□□□□□ -0.46
ATG4D-206ENST00000586863 SLC35F4A4IF30 521 aa12.16□□□□□ -0.46
ATG4D-206ENST00000586863 TMEM247A6NEH6 219 aa12.16□□□□□ -0.46
ATG4D-206ENST00000586863 OR6C65A6NJZ3 312 aa12.16□□□□□ -0.46
ATG4D-206ENST00000586863 UBDO15205 165 aa12.16□□□□□ -0.46
ATG4D-206ENST00000586863 LMX1BO60663 402 aa12.16□□□□□ -0.46
ATG4D-206ENST00000586863 FZD7O75084 574 aa12.16□□□□□ -0.46
ATG4D-206ENST00000586863 IGKV3-15P01624 115 aa12.16□□□□□ -0.46
ATG4D-206ENST00000586863 OR4A8P0C604 315 aa12.16□□□□□ -0.46
ATG4D-206ENST00000586863 BMP2P12643 396 aa12.16□□□□□ -0.46
ATG4D-206ENST00000586863 HOXB9P17482 250 aaPredicted RBP12.16□□□□□ -0.46
ATG4D-206ENST00000586863 GZMKP49863 264 aa12.16□□□□□ -0.46
ATG4D-206ENST00000586863 RGNQ15493 299 aa12.16□□□□□ -0.46
ATG4D-206ENST00000586863 CARTPTQ16568 116 aa12.16□□□□□ -0.46
ATG4D-206ENST00000586863 C6orf89Q6UWU4 347 aa12.16□□□□□ -0.46
ATG4D-206ENST00000586863 MSI2Q96DH6 328 aaKnown RBP12.16□□□□□ -0.46
ATG4D-206ENST00000586863 VRK1Q99986 396 aaPredicted RBP12.16□□□□□ -0.46
ATG4D-206ENST00000586863 SHARPINQ9H0F6 387 aa12.16□□□□□ -0.46
ATG4D-206ENST00000586863 ARMC7Q9H6L4 198 aa12.16□□□□□ -0.46
ATG4D-206ENST00000586863 CHODLQ9H9P2 273 aa12.16□□□□□ -0.46
ATG4D-206ENST00000586863 BCL2L10Q9HD36 194 aa12.16□□□□□ -0.46
ATG4D-206ENST00000586863 A4GALTQ9NPC4 353 aa12.16□□□□□ -0.46
ATG4D-206ENST00000586863 LPAR3Q9UBY5 353 aa12.16□□□□□ -0.46
ATG4D-206ENST00000586863 RCE1Q9Y256 329 aa12.16□□□□□ -0.46
ATG4D-206ENST00000586863 IGKV1D-42A0A075B6H8 117 aa12.15□□□□□ -0.46
ATG4D-206ENST00000586863 ZNF503-AS2A6NEH8 195 aa12.15□□□□□ -0.46
ATG4D-206ENST00000586863 B9A039 149 aa12.15□□□□□ -0.46
ATG4D-206ENST00000586863 M0R082 166 aa12.15□□□□□ -0.46
ATG4D-206ENST00000586863 NDUFS8O00217 210 aa12.15□□□□□ -0.46
ATG4D-206ENST00000586863 CLIC1O00299 241 aa12.15□□□□□ -0.46
ATG4D-206ENST00000586863 PDE5AO76074 875 aa12.15□□□□□ -0.46
ATG4D-206ENST00000586863 ZNF43P17038 809 aa12.15□□□□□ -0.46
ATG4D-206ENST00000586863 HTR2AP28223 471 aa12.15□□□□□ -0.46
ATG4D-206ENST00000586863 GTF2E2P29084 291 aaKnown RBP12.15□□□□□ -0.46
ATG4D-206ENST00000586863 SH3BGRP55822 239 aaPredicted RBP12.15□□□□□ -0.46
ATG4D-206ENST00000586863 CBX1P83916 185 aa12.15□□□□□ -0.46
ATG4D-206ENST00000586863 ARF1P84077 181 aaKnown RBP12.15□□□□□ -0.46
ATG4D-206ENST00000586863 HGFACQ04756 655 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms