RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 TFPIP10646 304 aa9.18□□□□□ -0.94
APOC1-201ENST00000586638 HIST1H1CP16403 213 aaKnown RBP9.18□□□□□ -0.94
APOC1-201ENST00000586638 ZNF3P17036 446 aa9.18□□□□□ -0.94
APOC1-201ENST00000586638 HK1P19367 917 aa9.18□□□□□ -0.94
APOC1-201ENST00000586638 GRPRP30550 384 aa9.18□□□□□ -0.94
APOC1-201ENST00000586638 HTR3AP46098 478 aa9.18□□□□□ -0.94
APOC1-201ENST00000586638 DNASE1L1P49184 302 aa9.18□□□□□ -0.94
APOC1-201ENST00000586638 DLX5P56178 289 aa9.18□□□□□ -0.94
APOC1-201ENST00000586638 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.18□□□□□ -0.94
APOC1-201ENST00000586638 SNTA1Q13424 505 aa9.18□□□□□ -0.94
APOC1-201ENST00000586638 DOC2BQ14184 412 aa9.18□□□□□ -0.94
APOC1-201ENST00000586638 CRMP1Q14194 572 aa9.18□□□□□ -0.94
APOC1-201ENST00000586638 C4orf17Q53FE4 359 aa9.18□□□□□ -0.94
APOC1-201ENST00000586638 GPR107Q5VW38 600 aa9.18□□□□□ -0.94
APOC1-201ENST00000586638 SLC22A10Q63ZE4 541 aa9.18□□□□□ -0.94
APOC1-201ENST00000586638 NIPAL3Q6P499 406 aa9.18□□□□□ -0.94
APOC1-201ENST00000586638 PAQR6Q6TCH4 344 aa9.18□□□□□ -0.94
APOC1-201ENST00000586638 PLCZ1Q86YW0 608 aa9.18□□□□□ -0.94
APOC1-201ENST00000586638 GHDCQ8N2G8 530 aa9.18□□□□□ -0.94
APOC1-201ENST00000586638 SLC43A2Q8N370 569 aa9.18□□□□□ -0.94
APOC1-201ENST00000586638 LRRC75AQ8NAA5 344 aa9.18□□□□□ -0.94
APOC1-201ENST00000586638 FAM98AQ8NCA5 519 aaKnown RBP9.18□□□□□ -0.94
APOC1-201ENST00000586638 SLC37A3Q8NCC5 494 aa9.18□□□□□ -0.94
APOC1-201ENST00000586638 BOD1L1Q8NFC6 3051 aa9.18□□□□□ -0.94
APOC1-201ENST00000586638 OR52I1Q8NGK6 324 aa9.18□□□□□ -0.94
APOC1-201ENST00000586638 OR9Q1Q8NGQ5 310 aa9.18□□□□□ -0.94
APOC1-201ENST00000586638 OR4K13Q8NH42 304 aa9.18□□□□□ -0.94
APOC1-201ENST00000586638 ZPLD1Q8TCW7 415 aa9.18□□□□□ -0.94
APOC1-201ENST00000586638 STK35Q8TDR2 534 aa9.18□□□□□ -0.94
APOC1-201ENST00000586638 LIPHQ8WWY8 451 aa9.18□□□□□ -0.94
APOC1-201ENST00000586638 RORBQ92753 470 aa9.18□□□□□ -0.94
APOC1-201ENST00000586638 NTNG2Q96CW9 530 aa9.18□□□□□ -0.94
APOC1-201ENST00000586638 GPX7Q96SL4 187 aaPredicted RBP9.18□□□□□ -0.94
APOC1-201ENST00000586638 TMEM185BQ9H7F4 350 aa9.18□□□□□ -0.94
APOC1-201ENST00000586638 ZNF71Q9NQZ8 489 aaPredicted RBP9.18□□□□□ -0.94
APOC1-201ENST00000586638 NDUFA13Q9P0J0 144 aa9.18□□□□□ -0.94
APOC1-201ENST00000586638 RSL24D1Q9UHA3 163 aaKnown RBP9.18□□□□□ -0.94
APOC1-201ENST00000586638 DKKL1Q9UK85 242 aa9.18□□□□□ -0.94
APOC1-201ENST00000586638 PCDHGB6Q9Y5F9 930 aa9.18□□□□□ -0.94
APOC1-201ENST00000586638 PCDHGB1Q9Y5G3 927 aa9.18□□□□□ -0.94
APOC1-201ENST00000586638 CREBBPQ92793 2442 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 FREM3P0C091 2139 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 HTR3EA5X5Y0 456 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 ARGFXA6NJG6 315 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 PRR23D1E9PI22 279 aaPredicted RBP9.17□□□□□ -0.94
APOC1-201ENST00000586638 M0R082 166 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 IMPA2O14732 288 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 NKX2-8O15522 239 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 EFNA2O43921 213 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 RAB36O95755 333 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 IFNGP01579 166 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 P04436 131 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 HIST1H2ABP04908 130 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 F13BP05160 661 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 GYPBP06028 91 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 PRR23D2P0DMB1 279 aaPredicted RBP9.17□□□□□ -0.94
APOC1-201ENST00000586638 CLUP10909 449 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 PEPDP12955 493 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 SHC1P29353 583 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 APOBEC1P41238 236 aaKnown RBP9.17□□□□□ -0.94
APOC1-201ENST00000586638 CTXN1P60606 82 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 OC90Q02509 493 aaPredicted RBP9.17□□□□□ -0.94
APOC1-201ENST00000586638 AIMP2Q13155 320 aaKnown RBP9.17□□□□□ -0.94
APOC1-201ENST00000586638 ITGADQ13349 1161 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 TMEM44Q2T9K0 475 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 KLHL12Q53G59 568 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 ALG10Q5BKT4 473 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 SLC25A53Q5H9E4 307 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 FAM69AQ5T7M9 428 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 UBE2UQ5VVX9 321 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 NXNL2Q5VZ03 156 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 SLC6A19Q695T7 634 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 JMJD6Q6NYC1 403 aaPredicted RBP9.17□□□□□ -0.94
APOC1-201ENST00000586638 B3GLCTQ6Y288 498 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 DPY19L2P2Q6ZN68 376 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 HIST3H2AQ7L7L0 130 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 ZNF367Q7RTV3 350 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 MAMDC2Q7Z304 686 aaPredicted RBP9.17□□□□□ -0.94
APOC1-201ENST00000586638 ZNF227Q86WZ6 799 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 GID4Q8IVV7 300 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 GPALPP1Q8IXQ4 340 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 PSD4Q8NDX1 1056 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 OR52E2Q8NGJ4 325 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 OR5J2Q8NH18 312 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 C9orf43Q8TAL5 461 aaPredicted RBP9.17□□□□□ -0.94
APOC1-201ENST00000586638 ZNF417Q8TAU3 575 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 FCGR1BQ92637 280 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 HIST1H2ACQ93077 130 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 KISS1RQ969F8 398 aaPredicted RBP9.17□□□□□ -0.94
APOC1-201ENST00000586638 ISOC1Q96CN7 298 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 DDIT4LQ96D03 193 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 NMD3Q96D46 503 aaKnown RBP9.17□□□□□ -0.94
APOC1-201ENST00000586638 TMEM80Q96HE8 168 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 TMEM41AQ96HV5 264 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 ARL5BQ96KC2 179 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 MRGPRX4Q96LA9 322 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 Q96M85 177 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 FRMD6Q96NE9 622 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 IP6K3Q96PC2 410 aa9.17□□□□□ -0.94
APOC1-201ENST00000586638 TSPAN32Q96QS1 320 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms