RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 NUP37Q8NFH4 326 aa13.06□□□□□ -0.32
VAPA-209ENST00000585042 IL17RDQ8NFM7 739 aa13.06□□□□□ -0.32
VAPA-209ENST00000585042 PNPT1Q8TCS8 783 aaKnown RBP13.06□□□□□ -0.32
VAPA-209ENST00000585042 FOXN4Q96NZ1 517 aa13.06□□□□□ -0.32
VAPA-209ENST00000585042 SORCS2Q96PQ0 1159 aa13.06□□□□□ -0.32
VAPA-209ENST00000585042 RAB1BQ9H0U4 201 aa13.06□□□□□ -0.32
VAPA-209ENST00000585042 PLK3Q9H4B4 646 aa13.06□□□□□ -0.32
VAPA-209ENST00000585042 TPT1P8Q9HAU6 139 aa13.06□□□□□ -0.32
VAPA-209ENST00000585042 C12orf10Q9HB07 376 aa13.06□□□□□ -0.32
VAPA-209ENST00000585042 INTS9Q9NV88 658 aaKnown RBP13.06□□□□□ -0.32
VAPA-209ENST00000585042 ADPRHL2Q9NX46 363 aa13.06□□□□□ -0.32
VAPA-209ENST00000585042 RCE1Q9Y256 329 aa13.06□□□□□ -0.32
VAPA-209ENST00000585042 ZNF443Q9Y2A4 671 aaPredicted RBP13.06□□□□□ -0.32
VAPA-209ENST00000585042 LOC100289279A0A1B0GTE1 492 aa13.05□□□□□ -0.32
VAPA-209ENST00000585042 LOC102725191A0A1B0GVB3 256 aa13.05□□□□□ -0.32
VAPA-209ENST00000585042 TMEM229AB2RXF0 380 aa13.05□□□□□ -0.32
VAPA-209ENST00000585042 OR2T1O43869 369 aa13.05□□□□□ -0.32
VAPA-209ENST00000585042 LY6HO94772 140 aa13.05□□□□□ -0.32
VAPA-209ENST00000585042 AHSA1O95433 338 aa13.05□□□□□ -0.32
VAPA-209ENST00000585042 ANP32DO95626 131 aa13.05□□□□□ -0.32
VAPA-209ENST00000585042 LGI1O95970 557 aa13.05□□□□□ -0.32
VAPA-209ENST00000585042 IGKV3-15P01624 115 aa13.05□□□□□ -0.32
VAPA-209ENST00000585042 OR4A8P0C604 315 aa13.05□□□□□ -0.32
VAPA-209ENST00000585042 KITP10721 976 aa13.05□□□□□ -0.32
VAPA-209ENST00000585042 APEHP13798 732 aaKnown RBP13.05□□□□□ -0.32
VAPA-209ENST00000585042 ETFAP13804 333 aa13.05□□□□□ -0.32
VAPA-209ENST00000585042 CBR1P16152 277 aa13.05□□□□□ -0.32
VAPA-209ENST00000585042 SRD5A1P18405 259 aa13.05□□□□□ -0.32
VAPA-209ENST00000585042 EPHA3P29320 983 aa13.05□□□□□ -0.32
VAPA-209ENST00000585042 SELENOPP49908 381 aa13.05□□□□□ -0.32
VAPA-209ENST00000585042 IDH3GP51553 393 aaPredicted RBP13.05□□□□□ -0.32
VAPA-209ENST00000585042 BNIP2Q12982 314 aa13.05□□□□□ -0.32
VAPA-209ENST00000585042 ADIPOQQ15848 244 aa13.05□□□□□ -0.32
VAPA-209ENST00000585042 HSP90B2PQ58FF3 399 aa13.05□□□□□ -0.32
VAPA-209ENST00000585042 NIPAL3Q6P499 406 aa13.05□□□□□ -0.32
VAPA-209ENST00000585042 SLC46A3Q7Z3Q1 461 aa13.05□□□□□ -0.32
VAPA-209ENST00000585042 CLIP4Q8N3C7 705 aa13.05□□□□□ -0.32
VAPA-209ENST00000585042 C3orf49Q96BT1 292 aa13.05□□□□□ -0.32
VAPA-209ENST00000585042 MSI2Q96DH6 328 aaKnown RBP13.05□□□□□ -0.32
VAPA-209ENST00000585042 ITCHQ96J02 903 aa13.05□□□□□ -0.32
VAPA-209ENST00000585042 MAELQ96JY0 434 aaKnown RBP13.05□□□□□ -0.32
VAPA-209ENST00000585042 VRK1Q99986 396 aaPredicted RBP13.05□□□□□ -0.32
VAPA-209ENST00000585042 PRR14Q9BWN1 585 aa13.05□□□□□ -0.32
VAPA-209ENST00000585042 ZNF442Q9H7R0 627 aa13.05□□□□□ -0.32
VAPA-209ENST00000585042 BCL2L10Q9HD36 194 aa13.05□□□□□ -0.32
VAPA-209ENST00000585042 ZIM2Q9NZV7 527 aa13.05□□□□□ -0.32
VAPA-209ENST00000585042 FTCDNL1E5RQL4 147 aa13.04□□□□□ -0.32
VAPA-209ENST00000585042 ZNF432O94892 652 aa13.04□□□□□ -0.32
VAPA-209ENST00000585042 BCHEP06276 602 aa13.04□□□□□ -0.32
VAPA-209ENST00000585042 ERCC1P07992 297 aaPredicted RBP13.04□□□□□ -0.32
VAPA-209ENST00000585042 ZNF16P17020 682 aaPredicted RBP13.04□□□□□ -0.32
VAPA-209ENST00000585042 ZNF23P17027 643 aa13.04□□□□□ -0.32
VAPA-209ENST00000585042 ZNF43P17038 809 aa13.04□□□□□ -0.32
VAPA-209ENST00000585042 GIFP27352 417 aa13.04□□□□□ -0.32
VAPA-209ENST00000585042 GGTLC2Q14390 218 aa13.04□□□□□ -0.32
VAPA-209ENST00000585042 SQLEQ14534 574 aa13.04□□□□□ -0.32
VAPA-209ENST00000585042 UGT2A3Q6UWM9 527 aa13.04□□□□□ -0.32
VAPA-209ENST00000585042 C6orf89Q6UWU4 347 aa13.04□□□□□ -0.32
VAPA-209ENST00000585042 NET1Q7Z628 596 aaPredicted RBP13.04□□□□□ -0.32
VAPA-209ENST00000585042 NEU4Q8WWR8 484 aaPredicted RBP13.04□□□□□ -0.32
VAPA-209ENST00000585042 C7orf26Q96N11 449 aa13.04□□□□□ -0.32
VAPA-209ENST00000585042 ANKRD27Q96NW4 1050 aa13.04□□□□□ -0.32
VAPA-209ENST00000585042 OXGR1Q96P68 337 aa13.04□□□□□ -0.32
VAPA-209ENST00000585042 RAD21L1Q9H4I0 556 aa13.04□□□□□ -0.32
VAPA-209ENST00000585042 WDR55Q9H6Y2 383 aaPredicted RBP13.04□□□□□ -0.32
VAPA-209ENST00000585042 SDR39U1Q9NRG7 319 aaPredicted RBP13.04□□□□□ -0.32
VAPA-209ENST00000585042 SLC6A13Q9NSD5 602 aa13.04□□□□□ -0.32
VAPA-209ENST00000585042 CHST2Q9Y4C5 530 aa13.04□□□□□ -0.32
VAPA-209ENST00000585042 MALRD1Q5VYJ5 2156 aa13.04□□□□□ -0.32
VAPA-209ENST00000585042 SLC43A1O75387 559 aa13.03□□□□□ -0.32
VAPA-209ENST00000585042 UPK3AO75631 287 aa13.03□□□□□ -0.32
VAPA-209ENST00000585042 CECR9P0C854 216 aa13.03□□□□□ -0.32
VAPA-209ENST00000585042 PNMTP11086 282 aa13.03□□□□□ -0.32
VAPA-209ENST00000585042 PRG2P13727 222 aa13.03□□□□□ -0.32
VAPA-209ENST00000585042 IGFBP5P24593 272 aa13.03□□□□□ -0.32
VAPA-209ENST00000585042 ARR3P36575 388 aa13.03□□□□□ -0.32
VAPA-209ENST00000585042 ROR2Q01974 943 aaKnown RBP13.03□□□□□ -0.32
VAPA-209ENST00000585042 IQCCQ4KMZ1 466 aa13.03□□□□□ -0.32
VAPA-209ENST00000585042 ZNF311Q5JNZ3 666 aa13.03□□□□□ -0.32
VAPA-209ENST00000585042 FAM120AOSQ5T036 256 aa13.03□□□□□ -0.32
VAPA-209ENST00000585042 NXNQ6DKJ4 435 aa13.03□□□□□ -0.32
VAPA-209ENST00000585042 LINGO2Q7L985 606 aa13.03□□□□□ -0.32
VAPA-209ENST00000585042 LSMEM1Q8N8F7 131 aa13.03□□□□□ -0.32
VAPA-209ENST00000585042 HPS1Q92902 700 aa13.03□□□□□ -0.32
VAPA-209ENST00000585042 TMEM19Q96HH6 336 aa13.03□□□□□ -0.32
VAPA-209ENST00000585042 IGHV4-61A0A0C4DH41 118 aa13.02□□□□□ -0.33
VAPA-209ENST00000585042 SLC35F4A4IF30 521 aa13.02□□□□□ -0.33
VAPA-209ENST00000585042 NR5A2O00482 541 aa13.02□□□□□ -0.33
VAPA-209ENST00000585042 TGDSO95455 350 aa13.02□□□□□ -0.33
VAPA-209ENST00000585042 STAMBPO95630 424 aa13.02□□□□□ -0.33
VAPA-209ENST00000585042 BMP2P12643 396 aa13.02□□□□□ -0.33
VAPA-209ENST00000585042 ETS2P15036 469 aa13.02□□□□□ -0.33
VAPA-209ENST00000585042 NPR2P20594 1047 aa13.02□□□□□ -0.33
VAPA-209ENST00000585042 GTF2E2P29084 291 aaKnown RBP13.02□□□□□ -0.33
VAPA-209ENST00000585042 POLR2JP52435 117 aaKnown RBP13.02□□□□□ -0.33
VAPA-209ENST00000585042 CLDN17P56750 224 aa13.02□□□□□ -0.33
VAPA-209ENST00000585042 POU3F1Q03052 451 aaPredicted RBP13.02□□□□□ -0.33
VAPA-209ENST00000585042 EGR4Q05215 589 aa13.02□□□□□ -0.33
VAPA-209ENST00000585042 LGALS3BPQ08380 585 aa13.02□□□□□ -0.33
VAPA-209ENST00000585042 FADDQ13158 208 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms