RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 OR1N1Q8NGS0 311 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 BPIFA2Q96DR5 249 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 TIMP4Q99727 224 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 TMEM27Q9HBJ8 222 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 RANGRFQ9HD47 186 aaPredicted RBP13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 Q9N2J8 555 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 FOXJ2Q9P0K8 574 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 COPS7AQ9UBW8 275 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 PADI1Q9ULC6 663 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 SIGLEC7Q9Y286 467 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 PTRH2Q9Y3E5 179 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 SDK2Q58EX2 2172 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 A0A0B4J293 547 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 RIIAD1A6NNX1 92 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 ARHGEF9O43307 516 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 BRINP1O60477 761 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 SC5DO75845 299 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 SLC2A10O95528 541 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 PSKH1P11801 424 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 NPR2P20594 1047 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 CSRP1P21291 193 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 CAV3P56539 151 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 FXYD6P3P58550 94 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 TMEM205Q6UW68 189 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 RTL4Q6ZR62 310 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 CPEB2Q7Z5Q1 589 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 PXKQ7Z7A4 578 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 CDH24Q86UP0 819 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 SLC37A3Q8NCC5 494 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 ZFAND1Q8TCF1 268 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 UBASH3BQ8TF42 649 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 C8orf44Q96CB5 159 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 CMTM3Q96MX0 182 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 DPH1Q9BZG8 443 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 SPRY4Q9C004 299 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 NTNG1Q9Y2I2 539 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 OR10H1Q9Y4A9 318 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 NOX1Q9Y5S8 564 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 RIF1Q5UIP0 2472 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 ZFHX2Q9C0A1 2572 aaPredicted RBP13.66□□□□□ -0.22
CDK5RAP3-236ENST00000584991 NPIPA5A0A0B4J1W7 369 aa13.66□□□□□ -0.22
CDK5RAP3-236ENST00000584991 SHISA3A0PJX4 238 aa13.66□□□□□ -0.22
CDK5RAP3-236ENST00000584991 CD8B2A6NJW9 211 aa13.66□□□□□ -0.22
CDK5RAP3-236ENST00000584991 NPIPA7E9PJI5 369 aa13.66□□□□□ -0.22
CDK5RAP3-236ENST00000584991 TM4SF5O14894 197 aa13.66□□□□□ -0.22
CDK5RAP3-236ENST00000584991 CHP2O43745 196 aa13.66□□□□□ -0.22
CDK5RAP3-236ENST00000584991 KLF7O75840 302 aaPredicted RBP13.66□□□□□ -0.22
CDK5RAP3-236ENST00000584991 IFNGP01579 166 aa13.66□□□□□ -0.22
CDK5RAP3-236ENST00000584991 IGKV1D-16P01601 117 aa13.66□□□□□ -0.22
CDK5RAP3-236ENST00000584991 SBK2P0C263 348 aa13.66□□□□□ -0.22
CDK5RAP3-236ENST00000584991 NPIPA8P0DM63 369 aa13.66□□□□□ -0.22
CDK5RAP3-236ENST00000584991 CD8BP10966 210 aa13.66□□□□□ -0.22
CDK5RAP3-236ENST00000584991 PEPDP12955 493 aa13.66□□□□□ -0.22
CDK5RAP3-236ENST00000584991 ZNF3P17036 446 aa13.66□□□□□ -0.22
CDK5RAP3-236ENST00000584991 HK1P19367 917 aa13.66□□□□□ -0.22
CDK5RAP3-236ENST00000584991 ELK1P19419 428 aa13.66□□□□□ -0.22
CDK5RAP3-236ENST00000584991 HTR2AP28223 471 aa13.66□□□□□ -0.22
CDK5RAP3-236ENST00000584991 GPR143P51810 404 aa13.66□□□□□ -0.22
CDK5RAP3-236ENST00000584991 FAPQ12884 760 aa13.66□□□□□ -0.22
CDK5RAP3-236ENST00000584991 HSD17B12Q53GQ0 312 aa13.66□□□□□ -0.22
CDK5RAP3-236ENST00000584991 PYHIN1Q6K0P9 492 aa13.66□□□□□ -0.22
CDK5RAP3-236ENST00000584991 PAPD4Q6PIY7 484 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP3-236ENST00000584991 ZAR1Q86SH2 424 aa13.66□□□□□ -0.22
CDK5RAP3-236ENST00000584991 C9orf40Q8IXQ3 194 aa13.66□□□□□ -0.22
CDK5RAP3-236ENST00000584991 PTP4A1Q93096 173 aa13.66□□□□□ -0.22
CDK5RAP3-236ENST00000584991 KISS1RQ969F8 398 aaPredicted RBP13.66□□□□□ -0.22
CDK5RAP3-236ENST00000584991 GAL3ST4Q96RP7 486 aa13.66□□□□□ -0.22
CDK5RAP3-236ENST00000584991 DCLRE1CQ96SD1 692 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP3-236ENST00000584991 WDR77Q9BQA1 342 aaPredicted RBP13.66□□□□□ -0.22
CDK5RAP3-236ENST00000584991 ISG20L2Q9H9L3 353 aaKnown RBP13.66□□□□□ -0.22
CDK5RAP3-236ENST00000584991 PAQR5Q9NXK6 330 aaPredicted RBP13.66□□□□□ -0.22
CDK5RAP3-236ENST00000584991 C19orf25Q9UFG5 118 aaPredicted RBP13.66□□□□□ -0.22
CDK5RAP3-236ENST00000584991 TRAV1-2A0A0B4J238 106 aa13.65□□□□□ -0.22
CDK5RAP3-236ENST00000584991 CENPVL1A0A0U1RR11 272 aa13.65□□□□□ -0.22
CDK5RAP3-236ENST00000584991 C2orf92A0A1B0GVN3 265 aa13.65□□□□□ -0.22
CDK5RAP3-236ENST00000584991 TNFSF15O95150 251 aa13.65□□□□□ -0.22
CDK5RAP3-236ENST00000584991 UMODP07911 640 aa13.65□□□□□ -0.22
CDK5RAP3-236ENST00000584991 CYC1P08574 325 aa13.65□□□□□ -0.22
CDK5RAP3-236ENST00000584991 MAKP20794 623 aa13.65□□□□□ -0.22
CDK5RAP3-236ENST00000584991 SLC2A5P22732 501 aa13.65□□□□□ -0.22
CDK5RAP3-236ENST00000584991 SLC6A1P30531 599 aa13.65□□□□□ -0.22
CDK5RAP3-236ENST00000584991 PPICP45877 212 aa13.65□□□□□ -0.22
CDK5RAP3-236ENST00000584991 PITPNBP48739 271 aa13.65□□□□□ -0.22
CDK5RAP3-236ENST00000584991 GZMKP49863 264 aa13.65□□□□□ -0.22
CDK5RAP3-236ENST00000584991 NRG3P56975 720 aa13.65□□□□□ -0.22
CDK5RAP3-236ENST00000584991 RRAS2P62070 204 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP3-236ENST00000584991 BAIAP2L2Q6UXY1 529 aa13.65□□□□□ -0.22
CDK5RAP3-236ENST00000584991 LSMEM1Q8N8F7 131 aa13.65□□□□□ -0.22
CDK5RAP3-236ENST00000584991 ZSCAN1Q8NBB4 408 aa13.65□□□□□ -0.22
CDK5RAP3-236ENST00000584991 NFAM1Q8NET5 270 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP3-236ENST00000584991 PHYHIPQ92561 330 aa13.65□□□□□ -0.22
CDK5RAP3-236ENST00000584991 ADIPOR1Q96A54 375 aa13.65□□□□□ -0.22
CDK5RAP3-236ENST00000584991 LPAR4Q99677 370 aa13.65□□□□□ -0.22
CDK5RAP3-236ENST00000584991 ZNF426Q9BUY5 554 aa13.65□□□□□ -0.22
CDK5RAP3-236ENST00000584991 IFT27Q9BW83 186 aa13.65□□□□□ -0.22
CDK5RAP3-236ENST00000584991 TRIM2Q9C040 744 aa13.65□□□□□ -0.22
CDK5RAP3-236ENST00000584991 NXF5Q9H1B4 397 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP3-236ENST00000584991 B3GAT2Q9NPZ5 323 aa13.65□□□□□ -0.22
CDK5RAP3-236ENST00000584991 ZNF275Q9NSD4 429 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP3-236ENST00000584991 EXTL2Q9UBQ6 330 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms