RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 SFXN2Q96NB2 322 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 FBXL4Q9UKA2 621 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 A0A087WZY1 265 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 ZNF593O00488 134 aaPredicted RBP12.12□□□□□ -0.47
RNF43-208ENST00000584437 IMPA2O14732 288 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 ZNF780AO75290 641 aaPredicted RBP12.12□□□□□ -0.47
RNF43-208ENST00000584437 LPLP06858 475 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 TIMP2P16035 220 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 FOXK2Q01167 660 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 DSC1Q08554 894 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 H3F3CQ6NXT2 135 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 SLC22A24Q8N4F4 322 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 OR6M1Q8NGM8 313 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 ADOQ96SZ5 270 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 ZIC5Q96T25 663 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 C1orf198Q9H425 327 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 PATZ1Q9HBE1 687 aaKnown RBP12.12□□□□□ -0.47
RNF43-208ENST00000584437 PURGQ9UJV8 347 aaKnown RBP12.12□□□□□ -0.47
RNF43-208ENST00000584437 MPPED1O15442 326 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 GALR3O60755 368 aaPredicted RBP12.12□□□□□ -0.47
RNF43-208ENST00000584437 BCKDHBP21953 392 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 ALKBH1Q13686 389 aaKnown RBP12.12□□□□□ -0.47
RNF43-208ENST00000584437 SLC35D3Q5M8T2 416 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 SFRP5Q5T4F7 317 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 DLK2Q6UY11 383 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 USP53Q70EK8 1073 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 SKA3Q8IX90 412 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 RNF175Q8N4F7 328 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 OR5L1Q8NGL2 311 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 SEC22CQ9BRL7 303 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 C8orf33Q9H7E9 229 aaPredicted RBP12.12□□□□□ -0.47
RNF43-208ENST00000584437 SLC39A9Q9NUM3 307 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 HAO2Q9NYQ3 351 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 LOC100289279A0A1B0GTE1 492 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 ZNF44P15621 663 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 VIPR2P41587 438 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 ZNF542PQ5EBM4 170 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 TBPL2Q6SJ96 375 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 ZNF765Q7L2R6 523 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 MFSD9Q8NBP5 474 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 OR10R2Q8NGX6 335 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 CPT1CQ8TCG5 803 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 MITD1Q8WV92 249 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 IL1F10Q8WWZ1 152 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 ANKRD9Q96BM1 317 aaPredicted RBP12.12□□□□□ -0.47
RNF43-208ENST00000584437 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.12□□□□□ -0.47
RNF43-208ENST00000584437 SRPK3Q9UPE1 567 aa12.12□□□□□ -0.47
RNF43-208ENST00000584437 GABARAPH6UMI1 98 aa12.11□□□□□ -0.47
RNF43-208ENST00000584437 ADRB1P08588 477 aa12.11□□□□□ -0.47
RNF43-208ENST00000584437 NFYBP25208 207 aa12.11□□□□□ -0.47
RNF43-208ENST00000584437 TACR3P29371 465 aa12.11□□□□□ -0.47
RNF43-208ENST00000584437 XCR1P46094 333 aa12.11□□□□□ -0.47
RNF43-208ENST00000584437 AARDQ4LEZ3 155 aa12.11□□□□□ -0.47
RNF43-208ENST00000584437 WDR88Q6ZMY6 472 aa12.11□□□□□ -0.47
RNF43-208ENST00000584437 DPY19L2P2Q6ZN68 376 aa12.11□□□□□ -0.47
RNF43-208ENST00000584437 TMEM130Q8N3G9 435 aa12.11□□□□□ -0.47
RNF43-208ENST00000584437 NANPQ8TBE9 248 aa12.11□□□□□ -0.47
RNF43-208ENST00000584437 NIT2Q9NQR4 276 aa12.11□□□□□ -0.47
RNF43-208ENST00000584437 RAB22AQ9UL26 194 aa12.11□□□□□ -0.47
RNF43-208ENST00000584437 MAN2B1O00754 1011 aa12.11□□□□□ -0.47
RNF43-208ENST00000584437 LAP3P28838 519 aa12.11□□□□□ -0.47
RNF43-208ENST00000584437 RGRP47804 291 aa12.11□□□□□ -0.47
RNF43-208ENST00000584437 POU3F1Q03052 451 aaPredicted RBP12.11□□□□□ -0.47
RNF43-208ENST00000584437 TRNP1Q6NT89 227 aa12.11□□□□□ -0.47
RNF43-208ENST00000584437 B3GLCTQ6Y288 498 aa12.11□□□□□ -0.47
RNF43-208ENST00000584437 MCATQ8IVS2 390 aaKnown RBP12.11□□□□□ -0.47
RNF43-208ENST00000584437 PSMF1Q92530 271 aa12.11□□□□□ -0.47
RNF43-208ENST00000584437 TNFRSF13CQ96RJ3 184 aa12.11□□□□□ -0.47
RNF43-208ENST00000584437 SYT17Q9BSW7 474 aa12.11□□□□□ -0.47
RNF43-208ENST00000584437 GABARAPL1Q9H0R8 117 aa12.11□□□□□ -0.47
RNF43-208ENST00000584437 EXOSC3Q9NQT5 275 aaKnown RBP12.11□□□□□ -0.47
RNF43-208ENST00000584437 LHX3Q9UBR4 397 aa12.11□□□□□ -0.47
RNF43-208ENST00000584437 MRPS28Q9Y2Q9 187 aaKnown RBP12.11□□□□□ -0.47
RNF43-208ENST00000584437 PCDHGA5Q9Y5G8 931 aa12.11□□□□□ -0.47
RNF43-208ENST00000584437 ZNF264O43296 627 aa12.11□□□□□ -0.47
RNF43-208ENST00000584437 OR2F2O95006 317 aa12.11□□□□□ -0.47
RNF43-208ENST00000584437 HLA-HP01893 362 aa12.11□□□□□ -0.47
RNF43-208ENST00000584437 ZNF28P17035 718 aa12.11□□□□□ -0.47
RNF43-208ENST00000584437 GCH1P30793 250 aa12.11□□□□□ -0.47
RNF43-208ENST00000584437 GP2P55259 537 aaKnown RBP12.11□□□□□ -0.47
RNF43-208ENST00000584437 OR2F1Q13607 317 aa12.11□□□□□ -0.47
RNF43-208ENST00000584437 CRMP1Q14194 572 aa12.11□□□□□ -0.47
RNF43-208ENST00000584437 SLCO4C1Q6ZQN7 724 aa12.11□□□□□ -0.47
RNF43-208ENST00000584437 Q6ZTK2 550 aa12.11□□□□□ -0.47
RNF43-208ENST00000584437 GDPD3Q7L5L3 318 aa12.11□□□□□ -0.47
RNF43-208ENST00000584437 OVCH1Q7RTY7 1134 aa12.11□□□□□ -0.47
RNF43-208ENST00000584437 ADGRE4PQ86SQ3 457 aa12.11□□□□□ -0.47
RNF43-208ENST00000584437 FAM155AB1AL88 458 aaPredicted RBP12.11□□□□□ -0.47
RNF43-208ENST00000584437 DDAH2O95865 285 aa12.11□□□□□ -0.47
RNF43-208ENST00000584437 MT-ND4LP03901 98 aa12.11□□□□□ -0.47
RNF43-208ENST00000584437 RAF1P04049 648 aa12.11□□□□□ -0.47
RNF43-208ENST00000584437 CD79AP11912 226 aa12.11□□□□□ -0.47
RNF43-208ENST00000584437 TAGLN2P37802 199 aaKnown RBP12.11□□□□□ -0.47
RNF43-208ENST00000584437 VASPP50552 380 aaPredicted RBP12.11□□□□□ -0.47
RNF43-208ENST00000584437 KIAA0141Q14154 515 aaPredicted RBP12.11□□□□□ -0.47
RNF43-208ENST00000584437 IAH1Q2TAA2 248 aaPredicted RBP12.11□□□□□ -0.47
RNF43-208ENST00000584437 PARS2Q7L3T8 475 aaKnown RBP12.11□□□□□ -0.47
RNF43-208ENST00000584437 ZNF439Q8NDP4 499 aa12.11□□□□□ -0.47
RNF43-208ENST00000584437 OR13C9Q8NGT0 318 aa12.11□□□□□ -0.47
RNF43-208ENST00000584437 OR10Z1Q8NGY1 313 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms