RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-233	ENST00000584186	AIM2	O14862	343 aa		11.93	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	OR2T1	O43869	369 aa		11.93	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	NDUFS7	O75251	213 aa		11.93	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	MFN2	O95140	757 aa		11.93	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	WNT11	O96014	354 aa		11.93	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	IGHV4-39	P01824	125 aa		11.93	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	OPN1SW	P03999	348 aa		11.93	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	NQO1	P15559	274 aa	Known RBP	11.93	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	GRPR	P30550	384 aa		11.93	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	ACVR1B	P36896	505 aa		11.93	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	FABP6	P51161	128 aa		11.93	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	OR1Q1	Q15612	314 aa		11.93	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	FAM69A	Q5T7M9	428 aa		11.93	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	HMBOX1	Q6NT76	420 aa		11.93	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	B3GLCT	Q6Y288	498 aa		11.93	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	RANBP3L	Q86VV4	465 aa	Predicted RBP	11.93	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	PTOV1	Q86YD1	416 aa		11.93	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	FBXL14	Q8N1E6	418 aa		11.93	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	DPP10	Q8N608	796 aa		11.93	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	C10orf53	Q8N6V4	93 aa		11.93	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	MAPK1IP1L	Q8NDC0	245 aa		11.93	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	11.93	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	ZNF417	Q8TAU3	575 aa		11.93	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	SLC47A1	Q96FL8	570 aa		11.93	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	ZNF587	Q96SQ5	575 aa	Predicted RBP	11.93	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	DHRS9	Q9BPW9	319 aa		11.93	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	SIKE1	Q9BRV8	207 aa		11.93	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	TMEM120A	Q9BXJ8	343 aa		11.93	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	GDF2	Q9UK05	429 aa	Predicted RBP	11.93	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	CAD	P27708	2225 aa		11.92	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186		A0A096LPE4	126 aa		11.92	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186		A0A1W2PPZ6	126 aa		11.92	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	OR6C65	A6NJZ3	312 aa		11.92	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	RNF223	E7ERA6	249 aa		11.92	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186		M0QX08	132 aa		11.92	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	PCSK6	P29122	969 aa		11.92	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	TTK	P33981	857 aa		11.92	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	CDH12	P55289	794 aa		11.92	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	UBE2N	P61088	152 aa	Known RBP	11.92	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	ROR2	Q01974	943 aa	Known RBP	11.92	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	RBBP4	Q09028	425 aa		11.92	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	ETFDH	Q16134	617 aa		11.92	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	TBRG1	Q3YBR2	411 aa		11.92	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	METTL21C	Q5VZV1	264 aa		11.92	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	FAM91A1	Q658Y4	838 aa		11.92	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	C5orf46	Q6UWT4	87 aa		11.92	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	H1FNT	Q75WM6	255 aa	Predicted RBP	11.92	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	LINGO2	Q7L985	606 aa		11.92	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	DTX2	Q86UW9	622 aa		11.92	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	MUC15	Q8N387	334 aa		11.92	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	OR1K1	Q8NGR3	316 aa		11.92	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	OXGR1	Q96P68	337 aa		11.92	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	CACNG6	Q9BXT2	260 aa		11.92	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	FKRP	Q9H9S5	495 aa		11.92	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	KLHL14	Q9P2G3	628 aa		11.92	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	B3GALT5	Q9Y2C3	310 aa		11.92	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186		A0A087WUJ7	227 aa		11.91	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186		A0A0B4J2E0	115 aa		11.91	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186		A0A1B0GX12	115 aa		11.91	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	ATP6V1G2-DDX39B	F2Z307	99 aa		11.91	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	SSX4	O60224	188 aa		11.91	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	TPST2	O60704	377 aa		11.91	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	SLC43A1	O75387	559 aa		11.91	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	TROVE2	P10155	538 aa	Known RBP eCLIP	11.91	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	TUBA1B	P68363	451 aa		11.91	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	TUBA4A	P68366	448 aa		11.91	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	DUSP7	Q16829	419 aa		11.91	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	CARD17	Q5XLA6	110 aa		11.91	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	TUBA1A	Q71U36	451 aa		11.91	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	NET1	Q7Z628	596 aa	Predicted RBP	11.91	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	GPR137C	Q8N3F9	429 aa		11.91	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	OR10A6	Q8NH74	314 aa		11.91	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	VANGL1	Q8TAA9	524 aa	Predicted RBP	11.91	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	SLC26A7	Q8TE54	656 aa		11.91	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	TSPEAR	Q8WU66	669 aa		11.91	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	HTRA1	Q92743	480 aa		11.91	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	ADAD1	Q96M93	576 aa	Known RBP	11.91	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	EPYC	Q99645	322 aa		11.91	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	MCHR1	Q99705	422 aa		11.91	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	ASPN	Q9BXN1	380 aa		11.91	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	LINC00470	Q9BZP3	86 aa		11.91	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	KAT8	Q9H7Z6	458 aa	Known RBP	11.91	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	B3GAT1	Q9P2W7	334 aa		11.91	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	MOK	Q9UQ07	419 aa		11.91	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	RCE1	Q9Y256	329 aa		11.91	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	CPSF4L	A6NMK7	179 aa	Known RBP	11.9	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	FBP2	O00757	339 aa		11.9	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	SERPINI2	O75830	405 aa		11.9	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	VIM	P08670	466 aa	Known RBP	11.9	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	HLA-DOB	P13765	273 aa		11.9	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	AHCY	P23526	432 aa		11.9	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	PCGF2	P35227	344 aa		11.9	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	ARFIP2	P53365	341 aa		11.9	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	NUDT6	P53370	316 aa		11.9	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	PCBP3	P57721	371 aa	Known RBP	11.9	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	ARF1	P84077	181 aa	Known RBP	11.9	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	PMS2P3	Q13401	168 aa		11.9	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	KRTAP21-3	Q3LHN1	58 aa		11.9	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	MMEL1	Q495T6	779 aa		11.9	□□□□□ -0.5
CDK5RAP3-233	ENST00000584186	ANKRD16	Q6P6B7	361 aa		11.9	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms