RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 PAQR7Q86WK9 346 aa2.53□□□□□ -2
PPP4R1-227ENST00000583988 PLA2G4DQ86XP0 818 aa2.53□□□□□ -2
PPP4R1-227ENST00000583988 NUDCD3Q8IVD9 361 aa2.53□□□□□ -2
PPP4R1-227ENST00000583988 BHLHE23Q8NDY6 225 aa2.53□□□□□ -2
PPP4R1-227ENST00000583988 IPMKQ8NFU5 416 aa2.53□□□□□ -2
PPP4R1-227ENST00000583988 FGF11Q92914 225 aa2.53□□□□□ -2
PPP4R1-227ENST00000583988 CMTM7Q96FZ5 175 aa2.53□□□□□ -2
PPP4R1-227ENST00000583988 ZNF285Q96NJ3 590 aa2.53□□□□□ -2
PPP4R1-227ENST00000583988 SLC38A2Q96QD8 506 aa2.53□□□□□ -2
PPP4R1-227ENST00000583988 RIOK1Q9BRS2 568 aaKnown RBP2.53□□□□□ -2
PPP4R1-227ENST00000583988 DEFB127Q9H1M4 99 aa2.53□□□□□ -2
PPP4R1-227ENST00000583988 AZI2Q9H6S1 392 aa2.53□□□□□ -2
PPP4R1-227ENST00000583988 EML4Q9HC35 981 aaKnown RBP2.53□□□□□ -2
PPP4R1-227ENST00000583988 GIN1Q9NXP7 522 aa2.53□□□□□ -2
PPP4R1-227ENST00000583988 CLCF1Q9UBD9 225 aa2.53□□□□□ -2
PPP4R1-227ENST00000583988 SEC14L3Q9UDX4 400 aa2.53□□□□□ -2
PPP4R1-227ENST00000583988 TP53TG5Q9Y2B4 290 aa2.53□□□□□ -2
PPP4R1-227ENST00000583988 PDS5BQ9NTI5 1447 aa2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 TRBV6-6A0A0A6YYG2 114 aa2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 OR5B21A6NL26 309 aa2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 SNTNA6NMZ2 147 aa2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 ZNF208O43345 1280 aa2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 ICOSLGO75144 302 aa2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 MTX2O75431 263 aa2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 OXSR1O95747 527 aaPredicted RBP2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 TSPAN12O95859 305 aa2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 PRB2P02812 416 aaPredicted RBP2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 FGF1P05230 155 aa2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 HMGB2P26583 209 aaKnown RBP2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 HSD17B2P37059 387 aa2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 YAP1P46937 504 aaKnown RBP2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 LHX2P50458 406 aa2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 ARFIP1P53367 373 aa2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 HERVK_113P61574 105 aa2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 OGDHQ02218 1023 aa2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 IL24Q13007 206 aa2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 CHIT1Q13231 466 aa2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 CYTH1Q15438 398 aa2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 GPR157Q5UAW9 335 aa2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 CTRB2Q6GPI1 263 aa2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 Q6ZN92 141 aa2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 ACP7Q6ZNF0 438 aa2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 PEX26Q7Z412 305 aa2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 RALGPS2Q86X27 583 aaPredicted RBP2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 ENTHD1Q8IYW4 607 aa2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 ZCCHC7Q8N3Z6 543 aaKnown RBP2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 VN1R2Q8NFZ6 395 aa2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 OR5D13Q8NGL4 314 aa2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 OR1N2Q8NGR9 330 aa2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 OR9G1Q8NH87 305 aa2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 MCOLN3Q8TDD5 553 aa2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 NDRG1Q92597 394 aaKnown RBP2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 C10orf35Q96D05 121 aa2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 MTMR9Q96QG7 549 aa2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 PSKH2Q96QS6 385 aa2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 MFFQ9GZY8 342 aa2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 SIAEQ9HAT2 523 aa2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 ZNF331Q9NQX6 463 aaPredicted RBP2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 EXD2Q9NVH0 621 aa2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 QPCTLQ9NXS2 382 aa2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 STOX2Q9P2F5 926 aaPredicted RBP2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 SLC25A15Q9Y619 301 aa2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 PHF3Q92576 2039 aaKnown RBP2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 MTCL1Q9Y4B5 1905 aaKnown RBP2.52□□□□□ -2.01
PPP4R1-227ENST00000583988 NSG1A0A0A6YYJ2 146 aa2.51□□□□□ -2.01
PPP4R1-227ENST00000583988 IGHV3-64DA0A0J9YX35 117 aa2.51□□□□□ -2.01
PPP4R1-227ENST00000583988 LAD1O00515 517 aa2.51□□□□□ -2.01
PPP4R1-227ENST00000583988 MMP1P03956 469 aa2.51□□□□□ -2.01
PPP4R1-227ENST00000583988 ZNF853P0CG23 659 aa2.51□□□□□ -2.01
PPP4R1-227ENST00000583988 TOP1P11387 765 aaKnown RBP2.51□□□□□ -2.01
PPP4R1-227ENST00000583988 ABOP16442 354 aa2.51□□□□□ -2.01
PPP4R1-227ENST00000583988 PCMT1P22061 227 aa2.51□□□□□ -2.01
PPP4R1-227ENST00000583988 CD1CP29017 333 aa2.51□□□□□ -2.01
PPP4R1-227ENST00000583988 FDFT1P37268 417 aa2.51□□□□□ -2.01
PPP4R1-227ENST00000583988 VHLP40337 213 aa2.51□□□□□ -2.01
PPP4R1-227ENST00000583988 SLC26A3P40879 764 aa2.51□□□□□ -2.01
PPP4R1-227ENST00000583988 MNAT1P51948 309 aa2.51□□□□□ -2.01
PPP4R1-227ENST00000583988 SUCLG1P53597 346 aaKnown RBP2.51□□□□□ -2.01
PPP4R1-227ENST00000583988 AIF1P55008 147 aa2.51□□□□□ -2.01
PPP4R1-227ENST00000583988 RPL23AP62750 156 aaKnown RBP2.51□□□□□ -2.01
PPP4R1-227ENST00000583988 SCRN3Q0VDG4 424 aa2.51□□□□□ -2.01
PPP4R1-227ENST00000583988 DMRTC1Q5HYR2 192 aa2.51□□□□□ -2.01
PPP4R1-227ENST00000583988 AGBL2Q5U5Z8 902 aa2.51□□□□□ -2.01
PPP4R1-227ENST00000583988 FRMPD2BQ6IN97 320 aa2.51□□□□□ -2.01
PPP4R1-227ENST00000583988 RUFY3Q7L099 469 aa2.51□□□□□ -2.01
PPP4R1-227ENST00000583988 EFL1Q7Z2Z2 1120 aaKnown RBP2.51□□□□□ -2.01
PPP4R1-227ENST00000583988 MFSD6LQ8IWD5 586 aa2.51□□□□□ -2.01
PPP4R1-227ENST00000583988 ZNF679Q8IYX0 411 aa2.51□□□□□ -2.01
PPP4R1-227ENST00000583988 ZNF433Q8N7K0 673 aaPredicted RBP2.51□□□□□ -2.01
PPP4R1-227ENST00000583988 ARIH2OSQ8N7S6 290 aa2.51□□□□□ -2.01
PPP4R1-227ENST00000583988 PYROXD1Q8WU10 500 aa2.51□□□□□ -2.01
PPP4R1-227ENST00000583988 ARPC1AQ92747 370 aa2.51□□□□□ -2.01
PPP4R1-227ENST00000583988 RPUSD4Q96CM3 377 aaKnown RBP2.51□□□□□ -2.01
PPP4R1-227ENST00000583988 SECISBP2Q96T21 854 aaKnown RBP2.51□□□□□ -2.01
PPP4R1-227ENST00000583988 NPAS2Q99743 824 aa2.51□□□□□ -2.01
PPP4R1-227ENST00000583988 ECSITQ9BQ95 431 aa2.51□□□□□ -2.01
PPP4R1-227ENST00000583988 FN3KRPQ9HA64 309 aa2.51□□□□□ -2.01
PPP4R1-227ENST00000583988 LY9Q9HBG7 655 aa2.51□□□□□ -2.01
PPP4R1-227ENST00000583988 MRPL47Q9HD33 250 aaKnown RBP2.51□□□□□ -2.01
PPP4R1-227ENST00000583988 PIGLQ9Y2B2 252 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms