RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 AAED1Q7RTV5 226 aa8.7□□□□□ -1.02
SKA2-208ENST00000583927 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.7□□□□□ -1.02
SKA2-208ENST00000583927 GPAT4Q86UL3 456 aa8.7□□□□□ -1.02
SKA2-208ENST00000583927 EPHX4Q8IUS5 362 aa8.7□□□□□ -1.02
SKA2-208ENST00000583927 GPR32P1Q8NGA4 272 aa8.7□□□□□ -1.02
SKA2-208ENST00000583927 LILRB1Q8NHL6 650 aaPredicted RBP8.7□□□□□ -1.02
SKA2-208ENST00000583927 RP9Q8TA86 221 aaKnown RBP8.7□□□□□ -1.02
SKA2-208ENST00000583927 MAGEE2Q8TD90 523 aaPredicted RBP8.7□□□□□ -1.02
SKA2-208ENST00000583927 TAAR8Q969N4 342 aa8.7□□□□□ -1.02
SKA2-208ENST00000583927 FBXW5Q969U6 566 aa8.7□□□□□ -1.02
SKA2-208ENST00000583927 OXGR1Q96P68 337 aa8.7□□□□□ -1.02
SKA2-208ENST00000583927 ZNF385AQ96PM9 386 aaKnown RBP8.7□□□□□ -1.02
SKA2-208ENST00000583927 ECSITQ9BQ95 431 aa8.7□□□□□ -1.02
SKA2-208ENST00000583927 WFDC6Q9BQY6 131 aa8.7□□□□□ -1.02
SKA2-208ENST00000583927 ZNF426Q9BUY5 554 aa8.7□□□□□ -1.02
SKA2-208ENST00000583927 POLR2J2Q9GZM3 115 aaKnown RBP8.7□□□□□ -1.02
SKA2-208ENST00000583927 POLR2J3Q9H1A7 115 aaKnown RBP8.7□□□□□ -1.02
SKA2-208ENST00000583927 CXorf56Q9H5V9 222 aa8.7□□□□□ -1.02
SKA2-208ENST00000583927 MOV10Q9HCE1 1003 aaKnown RBP8.7□□□□□ -1.02
SKA2-208ENST00000583927 OBP2BQ9NPH6 170 aa8.7□□□□□ -1.02
SKA2-208ENST00000583927 B3GAT1Q9P2W7 334 aa8.7□□□□□ -1.02
SKA2-208ENST00000583927 AMDHD2Q9Y303 409 aa8.7□□□□□ -1.02
SKA2-208ENST00000583927 MAGED1Q9Y5V3 778 aaPredicted RBP8.7□□□□□ -1.02
SKA2-208ENST00000583927 CAPN7Q9Y6W3 813 aa8.7□□□□□ -1.02
SKA2-208ENST00000583927 CCT8L1PA6NM43 557 aa8.69□□□□□ -1.02
SKA2-208ENST00000583927 OVOL3O00110 214 aa8.69□□□□□ -1.02
SKA2-208ENST00000583927 RAD51DO75771 328 aa8.69□□□□□ -1.02
SKA2-208ENST00000583927 MT-ATP6P00846 226 aa8.69□□□□□ -1.02
SKA2-208ENST00000583927 IGF2P01344 180 aa8.69□□□□□ -1.02
SKA2-208ENST00000583927 IGHV3-9P01782 118 aa8.69□□□□□ -1.02
SKA2-208ENST00000583927 BGLAPP02818 100 aa8.69□□□□□ -1.02
SKA2-208ENST00000583927 DANCRP0C864 163 aa8.69□□□□□ -1.02
SKA2-208ENST00000583927 HOXB1P14653 301 aaPredicted RBP8.69□□□□□ -1.02
SKA2-208ENST00000583927 ZNF43P17038 809 aa8.69□□□□□ -1.02
SKA2-208ENST00000583927 GTF2E2P29084 291 aaKnown RBP8.69□□□□□ -1.02
SKA2-208ENST00000583927 CRYBA2P53672 197 aa8.69□□□□□ -1.02
SKA2-208ENST00000583927 CDH12P55289 794 aa8.69□□□□□ -1.02
SKA2-208ENST00000583927 SH3BGRP55822 239 aaPredicted RBP8.69□□□□□ -1.02
SKA2-208ENST00000583927 FOXD4Q12950 439 aaPredicted RBP8.69□□□□□ -1.02
SKA2-208ENST00000583927 CAPRIN1Q14444 709 aaKnown RBP8.69□□□□□ -1.02
SKA2-208ENST00000583927 STK11Q15831 433 aa8.69□□□□□ -1.02
SKA2-208ENST00000583927 C3orf36Q3SXR2 165 aa8.69□□□□□ -1.02
SKA2-208ENST00000583927 KLHL17Q6TDP4 642 aa8.69□□□□□ -1.02
SKA2-208ENST00000583927 TMEM108Q6UXF1 575 aa8.69□□□□□ -1.02
SKA2-208ENST00000583927 WDR31Q8NA23 367 aa8.69□□□□□ -1.02
SKA2-208ENST00000583927 SMYD1Q8NB12 490 aa8.69□□□□□ -1.02
SKA2-208ENST00000583927 OR6T1Q8NGN1 323 aa8.69□□□□□ -1.02
SKA2-208ENST00000583927 TMEM171Q8WVE6 324 aa8.69□□□□□ -1.02
SKA2-208ENST00000583927 AKAP1Q92667 903 aaKnown RBP eCLIP8.69□□□□□ -1.02
SKA2-208ENST00000583927 TAMM41Q96BW9 452 aa8.69□□□□□ -1.02
SKA2-208ENST00000583927 MPP4Q96JB8 637 aa8.69□□□□□ -1.02
SKA2-208ENST00000583927 LRR1Q96L50 414 aa8.69□□□□□ -1.02
SKA2-208ENST00000583927 ZNF583Q96ND8 569 aa8.69□□□□□ -1.02
SKA2-208ENST00000583927 MCHR1Q99705 422 aa8.69□□□□□ -1.02
SKA2-208ENST00000583927 SLC19A3Q9BZV2 496 aa8.69□□□□□ -1.02
SKA2-208ENST00000583927 SLC17A5Q9NRA2 495 aa8.69□□□□□ -1.02
SKA2-208ENST00000583927 MRPL39Q9NYK5 338 aaKnown RBP8.69□□□□□ -1.02
SKA2-208ENST00000583927 NPAP1Q9NZP6 1156 aa8.69□□□□□ -1.02
SKA2-208ENST00000583927 CR1P17927 2039 aa8.68□□□□□ -1.02
SKA2-208ENST00000583927 RTTNQ86VV8 2226 aa8.68□□□□□ -1.02
SKA2-208ENST00000583927 NAV3Q8IVL0 2385 aa8.68□□□□□ -1.02
SKA2-208ENST00000583927 TRAPPC13A5PLN9 417 aa8.68□□□□□ -1.02
SKA2-208ENST00000583927 SHISA9B4DS77 424 aa8.68□□□□□ -1.02
SKA2-208ENST00000583927 ZNF587BE7ETH6 402 aa8.68□□□□□ -1.02
SKA2-208ENST00000583927 MS4A18H0YCH9 400 aa8.68□□□□□ -1.02
SKA2-208ENST00000583927 M0R082 166 aa8.68□□□□□ -1.02
SKA2-208ENST00000583927 TRAF3IP2O43734 574 aaPredicted RBP8.68□□□□□ -1.02
SKA2-208ENST00000583927 AKAP8O43823 692 aaKnown RBP8.68□□□□□ -1.02
SKA2-208ENST00000583927 CCDC22O60826 627 aa8.68□□□□□ -1.02
SKA2-208ENST00000583927 LYPD3O95274 346 aa8.68□□□□□ -1.02
SKA2-208ENST00000583927 IFNA14P01570 189 aa8.68□□□□□ -1.02
SKA2-208ENST00000583927 GRPRP30550 384 aa8.68□□□□□ -1.02
SKA2-208ENST00000583927 SELENOPP49908 381 aa8.68□□□□□ -1.02
SKA2-208ENST00000583927 FOXG1P55316 489 aaPredicted RBP8.68□□□□□ -1.02
SKA2-208ENST00000583927 RIPPLY3P57055 190 aa8.68□□□□□ -1.02
SKA2-208ENST00000583927 NPTX1Q15818 432 aa8.68□□□□□ -1.02
SKA2-208ENST00000583927 ETFDHQ16134 617 aa8.68□□□□□ -1.02
SKA2-208ENST00000583927 MS4A18Q3C1V0 323 aa8.68□□□□□ -1.02
SKA2-208ENST00000583927 RABL3Q5HYI8 236 aa8.68□□□□□ -1.02
SKA2-208ENST00000583927 ENTPD8Q5MY95 495 aa8.68□□□□□ -1.02
SKA2-208ENST00000583927 NHLRC1Q6VVB1 395 aa8.68□□□□□ -1.02
SKA2-208ENST00000583927 ARPINQ7Z6K5 226 aa8.68□□□□□ -1.02
SKA2-208ENST00000583927 PXKQ7Z7A4 578 aa8.68□□□□□ -1.02
SKA2-208ENST00000583927 DTX2Q86UW9 622 aa8.68□□□□□ -1.02
SKA2-208ENST00000583927 SNX32Q86XE0 403 aa8.68□□□□□ -1.02
SKA2-208ENST00000583927 FAM169BQ8N8A8 192 aa8.68□□□□□ -1.02
SKA2-208ENST00000583927 ZNF417Q8TAU3 575 aa8.68□□□□□ -1.02
SKA2-208ENST00000583927 SLC26A7Q8TE54 656 aa8.68□□□□□ -1.02
SKA2-208ENST00000583927 ADAMTS16Q8TE57 1224 aa8.68□□□□□ -1.02
SKA2-208ENST00000583927 SLC25A36Q96CQ1 311 aa8.68□□□□□ -1.02
SKA2-208ENST00000583927 ZNF587Q96SQ5 575 aaPredicted RBP8.68□□□□□ -1.02
SKA2-208ENST00000583927 PRR14Q9BWN1 585 aa8.68□□□□□ -1.02
SKA2-208ENST00000583927 FAIMQ9NVQ4 179 aa8.68□□□□□ -1.02
SKA2-208ENST00000583927 BAG5Q9UL15 447 aa8.68□□□□□ -1.02
SKA2-208ENST00000583927 CSPG4Q6UVK1 2322 aa8.68□□□□□ -1.02
SKA2-208ENST00000583927 ARPC4-TTLL3A0A0A6YYG9 625 aa8.67□□□□□ -1.02
SKA2-208ENST00000583927 LOC100653049A0A140TA62 436 aa8.67□□□□□ -1.02
SKA2-208ENST00000583927 FAM220BPB1ANY3 271 aa8.67□□□□□ -1.02
SKA2-208ENST00000583927 M0R3H8 397 aa8.67□□□□□ -1.02
SKA2-208ENST00000583927 ABCD4O14678 606 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms