RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	ZNF311	Q5JNZ3	666 aa		13.15	□□□□□ -0.3
SREBF1-222	ENST00000583732	C6orf10	Q5SRN2	563 aa		13.15	□□□□□ -0.3
SREBF1-222	ENST00000583732	C1QTNF12	Q5T7M4	302 aa		13.15	□□□□□ -0.3
SREBF1-222	ENST00000583732	ANKRD16	Q6P6B7	361 aa		13.15	□□□□□ -0.3
SREBF1-222	ENST00000583732	GLB1L3	Q8NCI6	653 aa	Predicted RBP	13.15	□□□□□ -0.3
SREBF1-222	ENST00000583732	VPS33A	Q96AX1	596 aa		13.15	□□□□□ -0.3
SREBF1-222	ENST00000583732	SOX7	Q9BT81	388 aa		13.15	□□□□□ -0.3
SREBF1-222	ENST00000583732	PTDSS2	Q9BVG9	487 aa		13.15	□□□□□ -0.3
SREBF1-222	ENST00000583732	SPATA9	Q9BWV2	254 aa		13.15	□□□□□ -0.3
SREBF1-222	ENST00000583732	ZNF232	Q9UNY5	417 aa		13.15	□□□□□ -0.3
SREBF1-222	ENST00000583732		A0A096LPI6	279 aa		13.14	□□□□□ -0.31
SREBF1-222	ENST00000583732	LRP5L	A4QPB2	252 aa		13.14	□□□□□ -0.31
SREBF1-222	ENST00000583732	TMEM247	A6NEH6	219 aa		13.14	□□□□□ -0.31
SREBF1-222	ENST00000583732	OR6C65	A6NJZ3	312 aa		13.14	□□□□□ -0.31
SREBF1-222	ENST00000583732	hCG_2039718	K7EN88	272 aa		13.14	□□□□□ -0.31
SREBF1-222	ENST00000583732	NPIPB7	O75200	414 aa		13.14	□□□□□ -0.31
SREBF1-222	ENST00000583732	IL6	P05231	212 aa		13.14	□□□□□ -0.31
SREBF1-222	ENST00000583732	NUDT7	P0C024	238 aa		13.14	□□□□□ -0.31
SREBF1-222	ENST00000583732	ZNF43	P17038	809 aa		13.14	□□□□□ -0.31
SREBF1-222	ENST00000583732	HNF1A	P20823	631 aa		13.14	□□□□□ -0.31
SREBF1-222	ENST00000583732	CBL	P22681	906 aa		13.14	□□□□□ -0.31
SREBF1-222	ENST00000583732	THBS4	P35443	961 aa		13.14	□□□□□ -0.31
SREBF1-222	ENST00000583732	CAPZA2	P47755	286 aa		13.14	□□□□□ -0.31
SREBF1-222	ENST00000583732	PPOX	P50336	477 aa		13.14	□□□□□ -0.31
SREBF1-222	ENST00000583732	NPRL3	Q12980	569 aa		13.14	□□□□□ -0.31
SREBF1-222	ENST00000583732	SLC9B1	Q4ZJI4	515 aa		13.14	□□□□□ -0.31
SREBF1-222	ENST00000583732	SPATA21	Q7Z572	469 aa		13.14	□□□□□ -0.31
SREBF1-222	ENST00000583732	ZCCHC24	Q8N2G6	241 aa	Known RBP	13.14	□□□□□ -0.31
SREBF1-222	ENST00000583732	SVOPL	Q8N434	492 aa		13.14	□□□□□ -0.31
SREBF1-222	ENST00000583732	OR9I1	Q8NGQ6	314 aa		13.14	□□□□□ -0.31
SREBF1-222	ENST00000583732	STK35	Q8TDR2	534 aa		13.14	□□□□□ -0.31
SREBF1-222	ENST00000583732	KTI12	Q96EK9	354 aa	Predicted RBP	13.14	□□□□□ -0.31
SREBF1-222	ENST00000583732	BOD1	Q96IK1	185 aa		13.14	□□□□□ -0.31
SREBF1-222	ENST00000583732	LINC00470	Q9BZP3	86 aa		13.14	□□□□□ -0.31
SREBF1-222	ENST00000583732	RAB1B	Q9H0U4	201 aa		13.14	□□□□□ -0.31
SREBF1-222	ENST00000583732	MYOZ1	Q9NP98	299 aa	Predicted RBP	13.14	□□□□□ -0.31
SREBF1-222	ENST00000583732	CRNN	Q9UBG3	495 aa	Predicted RBP	13.14	□□□□□ -0.31
SREBF1-222	ENST00000583732	ANK2	Q01484	3957 aa		13.13	□□□□□ -0.31
SREBF1-222	ENST00000583732		A0A0G2JPF8	293 aa		13.13	□□□□□ -0.31
SREBF1-222	ENST00000583732	SH3PXD2B	A1X283	911 aa		13.13	□□□□□ -0.31
SREBF1-222	ENST00000583732	ZNF503-AS2	A6NEH8	195 aa		13.13	□□□□□ -0.31
SREBF1-222	ENST00000583732	HNRNPCL2	B2RXH8	293 aa		13.13	□□□□□ -0.31
SREBF1-222	ENST00000583732	HNRNPCL3	B7ZW38	293 aa		13.13	□□□□□ -0.31
SREBF1-222	ENST00000583732	FTCDNL1	E5RQL4	147 aa		13.13	□□□□□ -0.31
SREBF1-222	ENST00000583732	HAX1	O00165	279 aa		13.13	□□□□□ -0.31
SREBF1-222	ENST00000583732	HNRNPCL1	O60812	293 aa	Known RBP	13.13	□□□□□ -0.31
SREBF1-222	ENST00000583732	SLC43A1	O75387	559 aa		13.13	□□□□□ -0.31
SREBF1-222	ENST00000583732	PDE5A	O76074	875 aa		13.13	□□□□□ -0.31
SREBF1-222	ENST00000583732	IGLV1-44	P01699	117 aa		13.13	□□□□□ -0.31
SREBF1-222	ENST00000583732	HNRNPCL4	P0DMR1	293 aa		13.13	□□□□□ -0.31
SREBF1-222	ENST00000583732	IDO1	P14902	403 aa		13.13	□□□□□ -0.31
SREBF1-222	ENST00000583732	ZNF23	P17027	643 aa		13.13	□□□□□ -0.31
SREBF1-222	ENST00000583732	SH3BGR	P55822	239 aa	Predicted RBP	13.13	□□□□□ -0.31
SREBF1-222	ENST00000583732	WDR4	P57081	412 aa	Known RBP	13.13	□□□□□ -0.31
SREBF1-222	ENST00000583732	HGFAC	Q04756	655 aa		13.13	□□□□□ -0.31
SREBF1-222	ENST00000583732	EGR4	Q05215	589 aa		13.13	□□□□□ -0.31
SREBF1-222	ENST00000583732	C1D	Q13901	141 aa	Known RBP	13.13	□□□□□ -0.31
SREBF1-222	ENST00000583732	EFNB3	Q15768	340 aa		13.13	□□□□□ -0.31
SREBF1-222	ENST00000583732	CEACAM16	Q2WEN9	425 aa		13.13	□□□□□ -0.31
SREBF1-222	ENST00000583732	GPR137C	Q8N3F9	429 aa		13.13	□□□□□ -0.31
SREBF1-222	ENST00000583732	OR4F15	Q8NGB8	312 aa		13.13	□□□□□ -0.31
SREBF1-222	ENST00000583732	MFSD8	Q8NHS3	518 aa		13.13	□□□□□ -0.31
SREBF1-222	ENST00000583732	MAGEE2	Q8TD90	523 aa	Predicted RBP	13.13	□□□□□ -0.31
SREBF1-222	ENST00000583732	MAL2	Q969L2	176 aa		13.13	□□□□□ -0.31
SREBF1-222	ENST00000583732	ITCH	Q96J02	903 aa		13.13	□□□□□ -0.31
SREBF1-222	ENST00000583732	PARD6B	Q9BYG5	372 aa		13.13	□□□□□ -0.31
SREBF1-222	ENST00000583732	PLK3	Q9H4B4	646 aa		13.13	□□□□□ -0.31
SREBF1-222	ENST00000583732	ARMC7	Q9H6L4	198 aa		13.13	□□□□□ -0.31
SREBF1-222	ENST00000583732	RMND5A	Q9H871	391 aa		13.13	□□□□□ -0.31
SREBF1-222	ENST00000583732	GPR35	Q9HC97	309 aa		13.13	□□□□□ -0.31
SREBF1-222	ENST00000583732	THAP1	Q9NVV9	213 aa		13.13	□□□□□ -0.31
SREBF1-222	ENST00000583732	RPS6KB2	Q9UBS0	482 aa		13.13	□□□□□ -0.31
SREBF1-222	ENST00000583732		M0R082	166 aa		13.12	□□□□□ -0.31
SREBF1-222	ENST00000583732	SNN	O75324	88 aa	Predicted RBP	13.12	□□□□□ -0.31
SREBF1-222	ENST00000583732	STAMBP	O95630	424 aa		13.12	□□□□□ -0.31
SREBF1-222	ENST00000583732	ZCCHC18	P0CG32	403 aa		13.12	□□□□□ -0.31
SREBF1-222	ENST00000583732	DAO	P14920	347 aa		13.12	□□□□□ -0.31
SREBF1-222	ENST00000583732	NPR2	P20594	1047 aa		13.12	□□□□□ -0.31
SREBF1-222	ENST00000583732	IL2RG	P31785	369 aa		13.12	□□□□□ -0.31
SREBF1-222	ENST00000583732	ZSWIM7	Q19AV6	140 aa		13.12	□□□□□ -0.31
SREBF1-222	ENST00000583732	CR1L	Q2VPA4	569 aa		13.12	□□□□□ -0.31
SREBF1-222	ENST00000583732	TNFAIP8L3	Q5GJ75	292 aa		13.12	□□□□□ -0.31
SREBF1-222	ENST00000583732	CARD17	Q5XLA6	110 aa		13.12	□□□□□ -0.31
SREBF1-222	ENST00000583732	SLC2A7	Q6PXP3	512 aa		13.12	□□□□□ -0.31
SREBF1-222	ENST00000583732	MDP1	Q86V88	176 aa		13.12	□□□□□ -0.31
SREBF1-222	ENST00000583732	ZNF417	Q8TAU3	575 aa		13.12	□□□□□ -0.31
SREBF1-222	ENST00000583732	RNF217	Q8TC41	542 aa		13.12	□□□□□ -0.31
SREBF1-222	ENST00000583732	ZNF837	Q96EG3	531 aa	Predicted RBP	13.12	□□□□□ -0.31
SREBF1-222	ENST00000583732	OR52B2	Q96RD2	323 aa		13.12	□□□□□ -0.31
SREBF1-222	ENST00000583732	ZNF587	Q96SQ5	575 aa	Predicted RBP	13.12	□□□□□ -0.31
SREBF1-222	ENST00000583732	DYNLRB1	Q9NP97	96 aa		13.12	□□□□□ -0.31
SREBF1-222	ENST00000583732	ZIM2	Q9NZV7	527 aa		13.12	□□□□□ -0.31
SREBF1-222	ENST00000583732	B3GAT1	Q9P2W7	334 aa		13.12	□□□□□ -0.31
SREBF1-222	ENST00000583732	RCE1	Q9Y256	329 aa		13.12	□□□□□ -0.31
SREBF1-222	ENST00000583732	IFT52	Q9Y366	437 aa		13.12	□□□□□ -0.31
SREBF1-222	ENST00000583732	IGHV2OR16-5	A0A0B4J2B6	119 aa		13.11	□□□□□ -0.31
SREBF1-222	ENST00000583732	TMEM120B	A0PK00	339 aa		13.11	□□□□□ -0.31
SREBF1-222	ENST00000583732	C5orf58	C9J3I9	102 aa		13.11	□□□□□ -0.31
SREBF1-222	ENST00000583732	AIM2	O14862	343 aa		13.11	□□□□□ -0.31
SREBF1-222	ENST00000583732	ZNF432	O94892	652 aa		13.11	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms