RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 RNF148Q8N7C7 305 aa11.12□□□□□ -0.63
SMARCE1-218ENST00000582955 ZNF433Q8N7K0 673 aaPredicted RBP11.12□□□□□ -0.63
SMARCE1-218ENST00000582955 ANKS4BQ8N8V4 417 aa11.12□□□□□ -0.63
SMARCE1-218ENST00000582955 CCDC197Q8NCU1 140 aa11.12□□□□□ -0.63
SMARCE1-218ENST00000582955 OR6S1Q8NH40 331 aa11.12□□□□□ -0.63
SMARCE1-218ENST00000582955 HSD17B8Q92506 261 aa11.12□□□□□ -0.63
SMARCE1-218ENST00000582955 MPP4Q96JB8 637 aa11.12□□□□□ -0.63
SMARCE1-218ENST00000582955 OXGR1Q96P68 337 aa11.12□□□□□ -0.63
SMARCE1-218ENST00000582955 MOGAT1Q96PD6 335 aa11.12□□□□□ -0.63
SMARCE1-218ENST00000582955 USB1Q9BQ65 265 aaKnown RBP11.12□□□□□ -0.63
SMARCE1-218ENST00000582955 POLR2J2Q9GZM3 115 aaKnown RBP11.12□□□□□ -0.63
SMARCE1-218ENST00000582955 POLR2J3Q9H1A7 115 aaKnown RBP11.12□□□□□ -0.63
SMARCE1-218ENST00000582955 SLCO5A1Q9H2Y9 848 aa11.12□□□□□ -0.63
SMARCE1-218ENST00000582955 LIME1Q9H400 295 aa11.12□□□□□ -0.63
SMARCE1-218ENST00000582955 TAS2R16Q9NYV7 291 aa11.12□□□□□ -0.63
SMARCE1-218ENST00000582955 MALT1Q9UDY8 824 aa11.12□□□□□ -0.63
SMARCE1-218ENST00000582955 EGFL7Q9UHF1 273 aa11.12□□□□□ -0.63
SMARCE1-218ENST00000582955 RIMS3Q9UJD0 308 aa11.12□□□□□ -0.63
SMARCE1-218ENST00000582955 EDARQ9UNE0 448 aa11.12□□□□□ -0.63
SMARCE1-218ENST00000582955 B3GALT5Q9Y2C3 310 aa11.12□□□□□ -0.63
SMARCE1-218ENST00000582955 CORINQ9Y5Q5 1042 aa11.12□□□□□ -0.63
SMARCE1-218ENST00000582955 CREBBPQ92793 2442 aa11.11□□□□□ -0.63
SMARCE1-218ENST00000582955 KLF4O43474 513 aa11.11□□□□□ -0.63
SMARCE1-218ENST00000582955 FZD7O75084 574 aa11.11□□□□□ -0.63
SMARCE1-218ENST00000582955 GMNNO75496 209 aa11.11□□□□□ -0.63
SMARCE1-218ENST00000582955 OR5F1O95221 314 aa11.11□□□□□ -0.63
SMARCE1-218ENST00000582955 MT-ATP6P00846 226 aa11.11□□□□□ -0.63
SMARCE1-218ENST00000582955 IFNA8P32881 189 aa11.11□□□□□ -0.63
SMARCE1-218ENST00000582955 SELENOPP49908 381 aa11.11□□□□□ -0.63
SMARCE1-218ENST00000582955 FOXG1P55316 489 aaPredicted RBP11.11□□□□□ -0.63
SMARCE1-218ENST00000582955 CLDN17P56750 224 aa11.11□□□□□ -0.63
SMARCE1-218ENST00000582955 SLC25A3Q00325 362 aa11.11□□□□□ -0.63
SMARCE1-218ENST00000582955 PIN1Q13526 163 aaPredicted RBP11.11□□□□□ -0.63
SMARCE1-218ENST00000582955 FKBP9P1Q75LS8 142 aa11.11□□□□□ -0.63
SMARCE1-218ENST00000582955 UEVLDQ8IX04 471 aa11.11□□□□□ -0.63
SMARCE1-218ENST00000582955 PGAM4Q8N0Y7 254 aa11.11□□□□□ -0.63
SMARCE1-218ENST00000582955 SCAIQ8N9R8 606 aa11.11□□□□□ -0.63
SMARCE1-218ENST00000582955 POMGNT2Q8NAT1 580 aa11.11□□□□□ -0.63
SMARCE1-218ENST00000582955 ADPRHL1Q8NDY3 354 aa11.11□□□□□ -0.63
SMARCE1-218ENST00000582955 MUCL1Q96DR8 90 aa11.11□□□□□ -0.63
SMARCE1-218ENST00000582955 PLPPR2Q96GM1 343 aa11.11□□□□□ -0.63
SMARCE1-218ENST00000582955 PRSS27Q9BQR3 290 aa11.11□□□□□ -0.63
SMARCE1-218ENST00000582955 NGBQ9NPG2 151 aa11.11□□□□□ -0.63
SMARCE1-218ENST00000582955 FAM53CQ9NYF3 392 aa11.11□□□□□ -0.63
SMARCE1-218ENST00000582955 MRPL39Q9NYK5 338 aaKnown RBP11.11□□□□□ -0.63
SMARCE1-218ENST00000582955 B3GAT1Q9P2W7 334 aa11.11□□□□□ -0.63
SMARCE1-218ENST00000582955 ST6GALNAC2Q9UJ37 374 aa11.11□□□□□ -0.63
SMARCE1-218ENST00000582955 PLEKHA6Q9Y2H5 1048 aa11.11□□□□□ -0.63
SMARCE1-218ENST00000582955 PDZD2O15018 2839 aa11.11□□□□□ -0.63
SMARCE1-218ENST00000582955 ANKRD17O75179 2603 aaKnown RBP11.1□□□□□ -0.63
SMARCE1-218ENST00000582955 ABCA4P78363 2273 aa11.1□□□□□ -0.63
SMARCE1-218ENST00000582955 A0A1W2PPR1 153 aa11.1□□□□□ -0.63
SMARCE1-218ENST00000582955 OR5H1A6NKK0 313 aa11.1□□□□□ -0.63
SMARCE1-218ENST00000582955 AKAP8O43823 692 aaKnown RBP11.1□□□□□ -0.63
SMARCE1-218ENST00000582955 SERPINI2O75830 405 aa11.1□□□□□ -0.63
SMARCE1-218ENST00000582955 OR6A2O95222 327 aa11.1□□□□□ -0.63
SMARCE1-218ENST00000582955 CH25HO95992 272 aa11.1□□□□□ -0.63
SMARCE1-218ENST00000582955 IFNW1P05000 195 aa11.1□□□□□ -0.63
SMARCE1-218ENST00000582955 ITGA5P08648 1049 aa11.1□□□□□ -0.63
SMARCE1-218ENST00000582955 UMPSP11172 480 aa11.1□□□□□ -0.63
SMARCE1-218ENST00000582955 CDH2P19022 906 aaPredicted RBP11.1□□□□□ -0.63
SMARCE1-218ENST00000582955 TCN1P20061 433 aaPredicted RBP11.1□□□□□ -0.63
SMARCE1-218ENST00000582955 AHCYP23526 432 aa11.1□□□□□ -0.63
SMARCE1-218ENST00000582955 DNASE1P24855 282 aa11.1□□□□□ -0.63
SMARCE1-218ENST00000582955 YAP1P46937 504 aaKnown RBP11.1□□□□□ -0.63
SMARCE1-218ENST00000582955 NR1H2P55055 460 aa11.1□□□□□ -0.63
SMARCE1-218ENST00000582955 PUDPQ08623 228 aa11.1□□□□□ -0.63
SMARCE1-218ENST00000582955 PPA1Q15181 289 aa11.1□□□□□ -0.63
SMARCE1-218ENST00000582955 IFI44LQ53G44 452 aa11.1□□□□□ -0.63
SMARCE1-218ENST00000582955 TIMM23BQ5SRD1 257 aa11.1□□□□□ -0.63
SMARCE1-218ENST00000582955 GLYATQ6IB77 296 aa11.1□□□□□ -0.63
SMARCE1-218ENST00000582955 C16orf89Q6UX73 402 aa11.1□□□□□ -0.63
SMARCE1-218ENST00000582955 CBLL1Q75N03 491 aa11.1□□□□□ -0.63
SMARCE1-218ENST00000582955 ABHD12BQ7Z5M8 362 aaPredicted RBP11.1□□□□□ -0.63
SMARCE1-218ENST00000582955 NKAIN4Q8IVV8 208 aa11.1□□□□□ -0.63
SMARCE1-218ENST00000582955 FITM2Q8N6M3 262 aa11.1□□□□□ -0.63
SMARCE1-218ENST00000582955 FAM156AQ8NDB6 213 aa11.1□□□□□ -0.63
SMARCE1-218ENST00000582955 OR5J2Q8NH18 312 aa11.1□□□□□ -0.63
SMARCE1-218ENST00000582955 GEMIN6Q8WXD5 167 aaKnown RBP11.1□□□□□ -0.63
SMARCE1-218ENST00000582955 HSH2DQ96JZ2 352 aa11.1□□□□□ -0.63
SMARCE1-218ENST00000582955 PRRC1Q96M27 445 aa11.1□□□□□ -0.63
SMARCE1-218ENST00000582955 ALKBH3Q96Q83 286 aaPredicted RBP11.1□□□□□ -0.63
SMARCE1-218ENST00000582955 SLC19A3Q9BZV2 496 aa11.1□□□□□ -0.63
SMARCE1-218ENST00000582955 PLEKHF2Q9H8W4 249 aa11.1□□□□□ -0.63
SMARCE1-218ENST00000582955 UBTD1Q9HAC8 227 aa11.1□□□□□ -0.63
SMARCE1-218ENST00000582955 NANSQ9NR45 359 aa11.1□□□□□ -0.63
SMARCE1-218ENST00000582955 NDE1Q9NXR1 346 aa11.1□□□□□ -0.63
SMARCE1-218ENST00000582955 ADAM21Q9UKJ8 722 aa11.1□□□□□ -0.63
SMARCE1-218ENST00000582955 RCE1Q9Y256 329 aa11.1□□□□□ -0.63
SMARCE1-218ENST00000582955 SPG11Q96JI7 2443 aa11.1□□□□□ -0.63
SMARCE1-218ENST00000582955 OR6C65A6NJZ3 312 aa11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 ENO4A6NNW6 628 aa11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 ZNF587BE7ETH6 402 aa11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 C11orf98E9PRG8 122 aa11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 MS4A18H0YCH9 400 aa11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 PLPP3O14495 311 aa11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 SLC43A1O75387 559 aa11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 HPRP00739 348 aa11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 HIST1H2ABP04908 130 aa11.09□□□□□ -0.63
SMARCE1-218ENST00000582955 ADORA3P0DMS8 318 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms