RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	ZCCHC18	P0CG32	403 aa		10.11	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	HNRNPCL4	P0DMR1	293 aa		10.11	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	APEH	P13798	732 aa	Known RBP	10.11	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	IGFBP5	P24593	272 aa		10.11	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	GTF2E2	P29084	291 aa	Known RBP	10.11	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	NR4A2	P43354	598 aa		10.11	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	POLR2J	P52435	117 aa	Known RBP	10.11	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	ARF1	P84077	181 aa	Known RBP	10.11	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	NAAA	Q02083	359 aa		10.11	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	NPRL3	Q12980	569 aa		10.11	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	ADIPOQ	Q15848	244 aa		10.11	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	ANKRD16	Q6P6B7	361 aa		10.11	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	SLC2A7	Q6PXP3	512 aa		10.11	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	ZCCHC24	Q8N2G6	241 aa	Known RBP	10.11	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	STK35	Q8TDR2	534 aa		10.11	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	MSI2	Q96DH6	328 aa	Known RBP	10.11	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	ZNF837	Q96EG3	531 aa	Predicted RBP	10.11	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	MAEL	Q96JY0	434 aa	Known RBP	10.11	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	KATNB1	Q9BVA0	655 aa		10.11	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	PRR14	Q9BWN1	585 aa		10.11	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	ARMC7	Q9H6L4	198 aa		10.11	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	OBP2B	Q9NPH6	170 aa		10.11	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	ZIM2	Q9NZV7	527 aa		10.11	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	PCDHB14	Q9Y5E9	798 aa		10.11	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	MALRD1	Q5VYJ5	2156 aa		10.11	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	SH3PXD2B	A1X283	911 aa		10.1	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	ZNF503-AS2	A6NEH8	195 aa		10.1	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	VWC2L	B2RUY7	222 aa		10.1	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	FTCDNL1	E5RQL4	147 aa		10.1	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114		M0R082	166 aa		10.1	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	UBD	O15205	165 aa		10.1	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	VAMP5	O95183	116 aa		10.1	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	ZNF43	P17038	809 aa		10.1	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	SRD5A1	P18405	259 aa		10.1	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	CAPZA2	P47755	286 aa		10.1	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	GZMK	P49863	264 aa		10.1	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	IDH3G	P51553	393 aa	Predicted RBP	10.1	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	MAGOH	P61326	146 aa	Known RBP	10.1	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	EGR4	Q05215	589 aa		10.1	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	RGN	Q15493	299 aa		10.1	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	KRTAP24-1	Q3LI83	254 aa		10.1	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	CARD17	Q5XLA6	110 aa		10.1	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	FAM166A	Q6J272	317 aa		10.1	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	COMTD1	Q86VU5	262 aa		10.1	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	MIER2	Q8N344	545 aa		10.1	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	MFSD8	Q8NHS3	518 aa		10.1	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	ZNF417	Q8TAU3	575 aa		10.1	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	RNF217	Q8TC41	542 aa		10.1	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	ZNF587	Q96SQ5	575 aa	Predicted RBP	10.1	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	RSPO3	Q9BXY4	272 aa	Predicted RBP	10.1	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	BPESC1	Q9GZL8	116 aa		10.1	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	PAIP1	Q9H074	479 aa	Known RBP	10.1	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	PIF1	Q9H611	641 aa		10.1	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	SDR39U1	Q9NRG7	319 aa	Predicted RBP	10.1	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	RPS6KB2	Q9UBS0	482 aa		10.1	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	LPAR3	Q9UBY5	353 aa		10.1	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	RAB21	Q9UL25	225 aa		10.1	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	KCNS2	Q9ULS6	477 aa		10.1	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	IFT52	Q9Y366	437 aa		10.1	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114		A0A096LPI6	279 aa		10.09	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	ARPC4-TTLL3	A0A0A6YYG9	625 aa		10.09	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	LRP5L	A4QPB2	252 aa		10.09	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	OR6C65	A6NJZ3	312 aa		10.09	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114		B9A039	149 aa		10.09	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	C5orf58	C9J3I9	102 aa		10.09	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	SLCO1B7	G3V0H7	640 aa		10.09	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	hCG_2039718	K7EN88	272 aa		10.09	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	CLIC1	O00299	241 aa		10.09	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	SLC43A1	O75387	559 aa		10.09	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	IGLV1-44	P01699	117 aa		10.09	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	HTR2A	P28223	471 aa		10.09	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	THBS4	P35443	961 aa		10.09	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	HGFAC	Q04756	655 aa		10.09	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	C1D	Q13901	141 aa	Known RBP	10.09	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	CEACAM16	Q2WEN9	425 aa		10.09	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	FAM120AOS	Q5T036	256 aa		10.09	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	SPATA21	Q7Z572	469 aa		10.09	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	GPR137C	Q8N3F9	429 aa		10.09	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	SVOPL	Q8N434	492 aa		10.09	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	NFKBID	Q8NI38	313 aa		10.09	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	BBS10	Q8TAM1	723 aa		10.09	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	GTF2H4	Q92759	462 aa		10.09	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	TAAR8	Q969N4	342 aa		10.09	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	BOD1	Q96IK1	185 aa		10.09	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	SOX7	Q9BT81	388 aa		10.09	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	LINC00470	Q9BZP3	86 aa		10.09	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	CRLF2	Q9HC73	371 aa		10.09	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	GPR35	Q9HC97	309 aa		10.09	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	A4GALT	Q9NPC4	353 aa		10.09	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	TMEM160	Q9NX00	188 aa		10.09	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	NKIRAS1	Q9NYS0	192 aa		10.09	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	B3GAT1	Q9P2W7	334 aa		10.09	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	CRNN	Q9UBG3	495 aa	Predicted RBP	10.09	□□□□□ -0.79
CDK5RAP3-223	ENST00000582114	IGKV1D-42	A0A075B6H8	117 aa		10.08	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114		A0A1B0GWA3	101 aa		10.08	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	LOC390937	A0A1W2PQ73	354 aa		10.08	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114		M0R3G1	203 aa		10.08	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	NDUFS8	O00217	210 aa		10.08	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	AIM2	O14862	343 aa		10.08	□□□□□ -0.8
CDK5RAP3-223	ENST00000582114	ZNF432	O94892	652 aa		10.08	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms