RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 GUCA2BQ16661 112 aa1.65□□□□□ -2.15
SMCHD1-206ENST00000581631 Q5W150 140 aa1.65□□□□□ -2.15
SMCHD1-206ENST00000581631 PGAP1Q75T13 922 aa1.65□□□□□ -2.15
SMCHD1-206ENST00000581631 NLRP9Q7RTR0 991 aa1.65□□□□□ -2.15
SMCHD1-206ENST00000581631 THOC6Q86W42 341 aaKnown RBP1.65□□□□□ -2.15
SMCHD1-206ENST00000581631 SLC35F2Q8IXU6 374 aa1.65□□□□□ -2.15
SMCHD1-206ENST00000581631 SLC38A6Q8IZM9 456 aa1.65□□□□□ -2.15
SMCHD1-206ENST00000581631 ARL10Q8N8L6 244 aa1.65□□□□□ -2.15
SMCHD1-206ENST00000581631 OSTF1Q92882 214 aa1.65□□□□□ -2.15
SMCHD1-206ENST00000581631 EXOSC8Q96B26 276 aaKnown RBP1.65□□□□□ -2.15
SMCHD1-206ENST00000581631 DNAJC19Q96DA6 116 aa1.65□□□□□ -2.15
SMCHD1-206ENST00000581631 AMDHD1Q96NU7 426 aa1.65□□□□□ -2.15
SMCHD1-206ENST00000581631 NDFIP1Q9BT67 221 aa1.65□□□□□ -2.15
SMCHD1-206ENST00000581631 ZNF416Q9BWM5 594 aa1.65□□□□□ -2.15
SMCHD1-206ENST00000581631 ELOVL3Q9HB03 270 aa1.65□□□□□ -2.15
SMCHD1-206ENST00000581631 SLCO1B3Q9NPD5 702 aa1.65□□□□□ -2.15
SMCHD1-206ENST00000581631 ZNF629Q9UEG4 869 aaPredicted RBP1.65□□□□□ -2.15
SMCHD1-206ENST00000581631 OR12D3Q9UGF7 316 aa1.65□□□□□ -2.15
SMCHD1-206ENST00000581631 WIF1Q9Y5W5 379 aa1.65□□□□□ -2.15
SMCHD1-206ENST00000581631 U3KQV3 271 aa1.65□□□□□ -2.15
SMCHD1-206ENST00000581631 IGSF9BQ9UPX0 1349 aa1.65□□□□□ -2.15
SMCHD1-206ENST00000581631 DHX57Q6P158 1386 aaKnown RBP1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 PLAC8L1A1L4L8 177 aa1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 C12orf71A8MTZ7 269 aa1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 PEX7O00628 323 aa1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 BET1O15155 118 aa1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 MAPK13O15264 365 aa1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 SLC31A2O15432 143 aa1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 RGS16O15492 202 aaPredicted RBP1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 AK1P00568 194 aa1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 IGHG4P01861 327 aa1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 ALDOBP05062 364 aa1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 CISD3P0C7P0 127 aa1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 TLX1NBP0CAT3 122 aa1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 MUC1P15941 1255 aaPredicted RBP1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 ZNF30P17039 623 aa1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 PGAM1P18669 254 aa1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 CMA1P23946 247 aa1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 MMP11P24347 488 aa1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 NPY1RP25929 384 aa1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 GCAP28676 217 aa1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 MAP3K8P41279 467 aa1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 GSSP48637 474 aa1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 HMGCS1Q01581 520 aa1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 IL1RL1Q01638 556 aa1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 ASPHQ12797 758 aa1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 STK11Q15831 433 aa1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 SGCAQ16586 387 aa1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 UBE2SQ16763 222 aa1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 CHRFAM7AQ494W8 412 aa1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 USH1GQ495M9 461 aa1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 CARD16Q5EG05 197 aa1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 PYHIN1Q6K0P9 492 aa1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 LYPD2Q6UXB3 125 aa1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 C19orf35Q6ZS72 473 aa1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 ZNF546Q86UE3 836 aa1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 CCDC65Q8IXS2 484 aa1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 PGAM4Q8N0Y7 254 aa1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 FADS6Q8N9I5 356 aa1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 OR1F12Q8NHA8 337 aa1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 SYNPRQ8TBG9 265 aa1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 TM4SF19Q96DZ7 209 aa1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 PELI1Q96FA3 418 aa1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 C7orf34Q96L11 122 aa1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 RIOK2Q9BVS4 552 aaKnown RBP1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 RWDD1Q9H446 243 aaPredicted RBP1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 REEP4Q9H6H4 257 aa1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 SLC40A1Q9NP59 571 aa1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 IL26Q9NPH9 171 aa1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 THUMPD1Q9NXG2 353 aaKnown RBP1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 ZNF222Q9UK12 451 aa1.64□□□□□ -2.15
SMCHD1-206ENST00000581631 KDRP35968 1356 aa1.63□□□□□ -2.15
SMCHD1-206ENST00000581631 PRSS37A4D1T9 235 aa1.63□□□□□ -2.15
SMCHD1-206ENST00000581631 CLDN3O15551 220 aa1.63□□□□□ -2.15
SMCHD1-206ENST00000581631 BCAS1O75363 584 aaPredicted RBP1.63□□□□□ -2.15
SMCHD1-206ENST00000581631 DIRAS3O95661 229 aa1.63□□□□□ -2.15
SMCHD1-206ENST00000581631 IMPDH1P20839 514 aa1.63□□□□□ -2.15
SMCHD1-206ENST00000581631 PDIA2Q13087 525 aaKnown RBP1.63□□□□□ -2.15
SMCHD1-206ENST00000581631 KRTAP13-2Q52LG2 175 aa1.63□□□□□ -2.15
SMCHD1-206ENST00000581631 BEND3Q5T5X7 828 aa1.63□□□□□ -2.15
SMCHD1-206ENST00000581631 NCR3LG1Q68D85 454 aa1.63□□□□□ -2.15
SMCHD1-206ENST00000581631 C1orf94Q6P1W5 598 aa1.63□□□□□ -2.15
SMCHD1-206ENST00000581631 CNSTQ6PJW8 725 aa1.63□□□□□ -2.15
SMCHD1-206ENST00000581631 AFTPHQ6ULP2 937 aa1.63□□□□□ -2.15
SMCHD1-206ENST00000581631 ARRDC1Q8N5I2 433 aa1.63□□□□□ -2.15
SMCHD1-206ENST00000581631 ACOT4Q8N9L9 421 aa1.63□□□□□ -2.15
SMCHD1-206ENST00000581631 OR1N2Q8NGR9 330 aa1.63□□□□□ -2.15
SMCHD1-206ENST00000581631 OR2G3Q8NGZ4 309 aa1.63□□□□□ -2.15
SMCHD1-206ENST00000581631 ACTRT1Q8TDG2 376 aa1.63□□□□□ -2.15
SMCHD1-206ENST00000581631 ACOT11Q8WXI4 607 aaPredicted RBP1.63□□□□□ -2.15
SMCHD1-206ENST00000581631 RMI2Q96E14 147 aa1.63□□□□□ -2.15
SMCHD1-206ENST00000581631 RNF2Q99496 336 aa1.63□□□□□ -2.15
SMCHD1-206ENST00000581631 GPA33Q99795 319 aa1.63□□□□□ -2.15
SMCHD1-206ENST00000581631 NOX3Q9HBY0 568 aa1.63□□□□□ -2.15
SMCHD1-206ENST00000581631 GLRX2Q9NS18 164 aa1.63□□□□□ -2.15
SMCHD1-206ENST00000581631 ACTR3BQ9P1U1 418 aa1.63□□□□□ -2.15
SMCHD1-206ENST00000581631 OR10H1Q9Y4A9 318 aa1.63□□□□□ -2.15
SMCHD1-206ENST00000581631 NFASCO94856 1347 aa1.63□□□□□ -2.15
SMCHD1-206ENST00000581631 FRMPD3Q5JV73 1810 aa1.62□□□□□ -2.15
SMCHD1-206ENST00000581631 F5H6K3 240 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms