RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 PLPP2O43688 288 aa10.93□□□□□ -0.66
SS18-219ENST00000581570 GSNP06396 782 aa10.93□□□□□ -0.66
SS18-219ENST00000581570 FGF4P08620 206 aa10.93□□□□□ -0.66
SS18-219ENST00000581570 FPR2P25090 351 aa10.93□□□□□ -0.66
SS18-219ENST00000581570 CAPZA2P47755 286 aa10.93□□□□□ -0.66
SS18-219ENST00000581570 CCT5P48643 541 aa10.93□□□□□ -0.66
SS18-219ENST00000581570 MRPS11P82912 194 aaKnown RBP10.93□□□□□ -0.66
SS18-219ENST00000581570 CKAP4Q07065 602 aaKnown RBP10.93□□□□□ -0.66
SS18-219ENST00000581570 FUT5Q11128 374 aa10.93□□□□□ -0.66
SS18-219ENST00000581570 UGT3A2Q3SY77 523 aa10.93□□□□□ -0.66
SS18-219ENST00000581570 GPAT3Q53EU6 434 aa10.93□□□□□ -0.66
SS18-219ENST00000581570 C10orf107Q8IVU9 208 aa10.93□□□□□ -0.66
SS18-219ENST00000581570 RIMKLAQ8IXN7 391 aa10.93□□□□□ -0.66
SS18-219ENST00000581570 CMIPQ8IY22 773 aa10.93□□□□□ -0.66
SS18-219ENST00000581570 CCDC36Q8IYA8 594 aa10.93□□□□□ -0.66
SS18-219ENST00000581570 FNDC5Q8NAU1 212 aa10.93□□□□□ -0.66
SS18-219ENST00000581570 OR4M2Q8NGB6 313 aa10.93□□□□□ -0.66
SS18-219ENST00000581570 C22orf15Q8WYQ4 148 aa10.93□□□□□ -0.66
SS18-219ENST00000581570 SYT3Q9BQG1 590 aa10.93□□□□□ -0.66
SS18-219ENST00000581570 ZNF665Q9H7R5 613 aa10.93□□□□□ -0.66
SS18-219ENST00000581570 UNKLQ9H9P5 680 aaKnown RBP10.93□□□□□ -0.66
SS18-219ENST00000581570 RASD1Q9Y272 281 aa10.93□□□□□ -0.66
SS18-219ENST00000581570 NOX1Q9Y5S8 564 aa10.93□□□□□ -0.66
SS18-219ENST00000581570 PKD1L1Q8TDX9 2849 aa10.92□□□□□ -0.66
SS18-219ENST00000581570 CFAP73A6NFT4 308 aa10.92□□□□□ -0.66
SS18-219ENST00000581570 J3QLI3 93 aa10.92□□□□□ -0.66
SS18-219ENST00000581570 PRSS23O95084 383 aa10.92□□□□□ -0.66
SS18-219ENST00000581570 CHRM4P08173 479 aa10.92□□□□□ -0.66
SS18-219ENST00000581570 UQCRBP14927 111 aa10.92□□□□□ -0.66
SS18-219ENST00000581570 GLRXP35754 106 aa10.92□□□□□ -0.66
SS18-219ENST00000581570 HPCAP84074 193 aa10.92□□□□□ -0.66
SS18-219ENST00000581570 EPS8Q12929 822 aa10.92□□□□□ -0.66
SS18-219ENST00000581570 MAD2L1BPQ15013 274 aaPredicted RBP10.92□□□□□ -0.66
SS18-219ENST00000581570 GSTA3Q16772 222 aa10.92□□□□□ -0.66
SS18-219ENST00000581570 C6orf136Q5SQH8 315 aa10.92□□□□□ -0.66
SS18-219ENST00000581570 DCAF12L2Q5VW00 463 aa10.92□□□□□ -0.66
SS18-219ENST00000581570 PRAMEF8Q5VWM4 474 aa10.92□□□□□ -0.66
SS18-219ENST00000581570 PRAMEF7Q5VXH5 474 aa10.92□□□□□ -0.66
SS18-219ENST00000581570 OR4F3Q6IEY1 312 aa10.92□□□□□ -0.66
SS18-219ENST00000581570 RBMS3Q6XE24 437 aaKnown RBP10.92□□□□□ -0.66
SS18-219ENST00000581570 SYT10Q6XYQ8 523 aa10.92□□□□□ -0.66
SS18-219ENST00000581570 LRP11Q86VZ4 500 aa10.92□□□□□ -0.66
SS18-219ENST00000581570 CNPY4Q8N129 248 aa10.92□□□□□ -0.66
SS18-219ENST00000581570 OR4A15Q8NGL6 344 aa10.92□□□□□ -0.66
SS18-219ENST00000581570 RNF217Q8TC41 542 aa10.92□□□□□ -0.66
SS18-219ENST00000581570 GPR35Q9HC97 309 aa10.92□□□□□ -0.66
SS18-219ENST00000581570 CORINQ9Y5Q5 1042 aa10.92□□□□□ -0.66
SS18-219ENST00000581570 PRAMEF27A3QJZ7 478 aa10.91□□□□□ -0.66
SS18-219ENST00000581570 A8MVM7 634 aa10.91□□□□□ -0.66
SS18-219ENST00000581570 RIPK2O43353 540 aa10.91□□□□□ -0.66
SS18-219ENST00000581570 TRIM13O60858 407 aa10.91□□□□□ -0.66
SS18-219ENST00000581570 RP2O75695 350 aa10.91□□□□□ -0.66
SS18-219ENST00000581570 NCR1O76036 304 aa10.91□□□□□ -0.66
SS18-219ENST00000581570 ZNF432O94892 652 aa10.91□□□□□ -0.66
SS18-219ENST00000581570 CHRNGP07510 517 aa10.91□□□□□ -0.66
SS18-219ENST00000581570 ZFP36P26651 326 aaKnown RBP10.91□□□□□ -0.66
SS18-219ENST00000581570 CRHR1P34998 444 aa10.91□□□□□ -0.66
SS18-219ENST00000581570 CLDN17P56750 224 aa10.91□□□□□ -0.66
SS18-219ENST00000581570 MVKQ03426 396 aa10.91□□□□□ -0.66
SS18-219ENST00000581570 ZP4Q12836 540 aa10.91□□□□□ -0.66
SS18-219ENST00000581570 BNIP2Q12982 314 aa10.91□□□□□ -0.66
SS18-219ENST00000581570 CEACAM16Q2WEN9 425 aa10.91□□□□□ -0.66
SS18-219ENST00000581570 TRMT5Q32P41 509 aaKnown RBP10.91□□□□□ -0.66
SS18-219ENST00000581570 XKR7Q5GH72 579 aa10.91□□□□□ -0.66
SS18-219ENST00000581570 AVPI1Q5T686 147 aa10.91□□□□□ -0.66
SS18-219ENST00000581570 GKAP1Q5VSY0 366 aaPredicted RBP10.91□□□□□ -0.66
SS18-219ENST00000581570 ZCCHC23Q6ZST2 131 aa10.91□□□□□ -0.66
SS18-219ENST00000581570 TRMT10CQ7L0Y3 403 aaKnown RBP10.91□□□□□ -0.66
SS18-219ENST00000581570 GSPT2Q8IYD1 628 aaKnown RBP10.91□□□□□ -0.66
SS18-219ENST00000581570 KDM8Q8N371 416 aa10.91□□□□□ -0.66
SS18-219ENST00000581570 GPR137CQ8N3F9 429 aa10.91□□□□□ -0.66
SS18-219ENST00000581570 RAB39BQ96DA2 213 aa10.91□□□□□ -0.66
SS18-219ENST00000581570 ZNF837Q96EG3 531 aaPredicted RBP10.91□□□□□ -0.66
SS18-219ENST00000581570 C3orf30Q96M34 536 aa10.91□□□□□ -0.66
SS18-219ENST00000581570 ZNF385DQ9H6B1 395 aa10.91□□□□□ -0.66
SS18-219ENST00000581570 C7orf69Q9H7B7 122 aa10.91□□□□□ -0.66
SS18-219ENST00000581570 MYEF2Q9P2K5 600 aaKnown RBP10.91□□□□□ -0.66
SS18-219ENST00000581570 FZR1Q9UM11 496 aa10.91□□□□□ -0.66
SS18-219ENST00000581570 NUP214P35658 2090 aaPredicted RBP10.9□□□□□ -0.66
SS18-219ENST00000581570 AGAP5A6NIR3 686 aa10.9□□□□□ -0.66
SS18-219ENST00000581570 POM121CA8CG34 1229 aa10.9□□□□□ -0.66
SS18-219ENST00000581570 RNASET2O00584 256 aaKnown RBP10.9□□□□□ -0.66
SS18-219ENST00000581570 FRS3O43559 492 aa10.9□□□□□ -0.66
SS18-219ENST00000581570 SLC43A1O75387 559 aa10.9□□□□□ -0.66
SS18-219ENST00000581570 CPSF4O95639 269 aaKnown RBP10.9□□□□□ -0.66
SS18-219ENST00000581570 NAT2P11245 290 aa10.9□□□□□ -0.66
SS18-219ENST00000581570 G6PDP11413 515 aa10.9□□□□□ -0.66
SS18-219ENST00000581570 ZNF35P13682 527 aa10.9□□□□□ -0.66
SS18-219ENST00000581570 ZNF43P17038 809 aa10.9□□□□□ -0.66
SS18-219ENST00000581570 UQCRC2P22695 453 aa10.9□□□□□ -0.66
SS18-219ENST00000581570 PRTN3P24158 256 aa10.9□□□□□ -0.66
SS18-219ENST00000581570 CLDN8P56748 225 aa10.9□□□□□ -0.66
SS18-219ENST00000581570 GNA13Q14344 377 aa10.9□□□□□ -0.66
SS18-219ENST00000581570 C1orf140Q5VVS0 124 aa10.9□□□□□ -0.66
SS18-219ENST00000581570 SIGLECL1Q8N7X8 197 aa10.9□□□□□ -0.66
SS18-219ENST00000581570 KIF18AQ8NI77 898 aa10.9□□□□□ -0.66
SS18-219ENST00000581570 DUX5Q96PT3 197 aa10.9□□□□□ -0.66
SS18-219ENST00000581570 C1QTNF5Q9BXJ0 243 aa10.9□□□□□ -0.66
SS18-219ENST00000581570 B3GNT2Q9NY97 397 aa10.9□□□□□ -0.66
SS18-219ENST00000581570 DUSP13Q9UII6 198 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms