RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 ZNF432O94892 652 aa9.2□□□□□ -0.94
RFFL-209ENST00000581265 TGFAP01135 160 aa9.2□□□□□ -0.94
RFFL-209ENST00000581265 CECR9P0C854 216 aa9.2□□□□□ -0.94
RFFL-209ENST00000581265 APEHP13798 732 aaKnown RBP9.2□□□□□ -0.94
RFFL-209ENST00000581265 IDO1P14902 403 aa9.2□□□□□ -0.94
RFFL-209ENST00000581265 CBR1P16152 277 aa9.2□□□□□ -0.94
RFFL-209ENST00000581265 ZNF23P17027 643 aa9.2□□□□□ -0.94
RFFL-209ENST00000581265 NCF2P19878 526 aaPredicted RBP9.2□□□□□ -0.94
RFFL-209ENST00000581265 GIFP27352 417 aa9.2□□□□□ -0.94
RFFL-209ENST00000581265 CRATP43155 626 aa9.2□□□□□ -0.94
RFFL-209ENST00000581265 PPOXP50336 477 aa9.2□□□□□ -0.94
RFFL-209ENST00000581265 IDH3GP51553 393 aaPredicted RBP9.2□□□□□ -0.94
RFFL-209ENST00000581265 DSTNP60981 165 aa9.2□□□□□ -0.94
RFFL-209ENST00000581265 HGFACQ04756 655 aa9.2□□□□□ -0.94
RFFL-209ENST00000581265 EGR4Q05215 589 aa9.2□□□□□ -0.94
RFFL-209ENST00000581265 PDCD4Q53EL6 469 aaKnown RBP9.2□□□□□ -0.94
RFFL-209ENST00000581265 NIPAL3Q6P499 406 aa9.2□□□□□ -0.94
RFFL-209ENST00000581265 ANKS4BQ8N8V4 417 aa9.2□□□□□ -0.94
RFFL-209ENST00000581265 NUP37Q8NFH4 326 aa9.2□□□□□ -0.94
RFFL-209ENST00000581265 ALKBH3Q96Q83 286 aaPredicted RBP9.2□□□□□ -0.94
RFFL-209ENST00000581265 DOK1Q99704 481 aa9.2□□□□□ -0.94
RFFL-209ENST00000581265 RAB1BQ9H0U4 201 aa9.2□□□□□ -0.94
RFFL-209ENST00000581265 ZNF442Q9H7R0 627 aa9.2□□□□□ -0.94
RFFL-209ENST00000581265 KCNK9Q9NPC2 374 aa9.2□□□□□ -0.94
RFFL-209ENST00000581265 SDR39U1Q9NRG7 319 aaPredicted RBP9.2□□□□□ -0.94
RFFL-209ENST00000581265 THAP1Q9NVV9 213 aa9.2□□□□□ -0.94
RFFL-209ENST00000581265 RCE1Q9Y256 329 aa9.2□□□□□ -0.94
RFFL-209ENST00000581265 ZNF443Q9Y2A4 671 aaPredicted RBP9.2□□□□□ -0.94
RFFL-209ENST00000581265 IFT52Q9Y366 437 aa9.2□□□□□ -0.94
RFFL-209ENST00000581265 A0A096LPE4 126 aa9.19□□□□□ -0.94
RFFL-209ENST00000581265 LOC102725191A0A1B0GVB3 256 aa9.19□□□□□ -0.94
RFFL-209ENST00000581265 A0A1W2PPZ6 126 aa9.19□□□□□ -0.94
RFFL-209ENST00000581265 SLCO1B7G3V0H7 640 aa9.19□□□□□ -0.94
RFFL-209ENST00000581265 SNNO75324 88 aaPredicted RBP9.19□□□□□ -0.94
RFFL-209ENST00000581265 AHSA1O95433 338 aa9.19□□□□□ -0.94
RFFL-209ENST00000581265 STAMBPO95630 424 aa9.19□□□□□ -0.94
RFFL-209ENST00000581265 BCHEP06276 602 aa9.19□□□□□ -0.94
RFFL-209ENST00000581265 PNMTP11086 282 aa9.19□□□□□ -0.94
RFFL-209ENST00000581265 ZNF43P17038 809 aa9.19□□□□□ -0.94
RFFL-209ENST00000581265 HNF1AP20823 631 aa9.19□□□□□ -0.94
RFFL-209ENST00000581265 CALCRP30988 508 aa9.19□□□□□ -0.94
RFFL-209ENST00000581265 ARR3P36575 388 aa9.19□□□□□ -0.94
RFFL-209ENST00000581265 TUBA1BP68363 451 aa9.19□□□□□ -0.94
RFFL-209ENST00000581265 TUBA4AP68366 448 aa9.19□□□□□ -0.94
RFFL-209ENST00000581265 ARF1P84077 181 aaKnown RBP9.19□□□□□ -0.94
RFFL-209ENST00000581265 ROR2Q01974 943 aaKnown RBP9.19□□□□□ -0.94
RFFL-209ENST00000581265 SQLEQ14534 574 aa9.19□□□□□ -0.94
RFFL-209ENST00000581265 CARTPTQ16568 116 aa9.19□□□□□ -0.94
RFFL-209ENST00000581265 IQCCQ4KMZ1 466 aa9.19□□□□□ -0.94
RFFL-209ENST00000581265 MSANTD1Q6ZTZ1 278 aa9.19□□□□□ -0.94
RFFL-209ENST00000581265 TUBA1AQ71U36 451 aa9.19□□□□□ -0.94
RFFL-209ENST00000581265 SERPINA11Q86U17 422 aa9.19□□□□□ -0.94
RFFL-209ENST00000581265 CCDC36Q8IYA8 594 aa9.19□□□□□ -0.94
RFFL-209ENST00000581265 KDM8Q8N371 416 aa9.19□□□□□ -0.94
RFFL-209ENST00000581265 IL17RDQ8NFM7 739 aa9.19□□□□□ -0.94
RFFL-209ENST00000581265 NEU4Q8WWR8 484 aaPredicted RBP9.19□□□□□ -0.94
RFFL-209ENST00000581265 SLC25A36Q96CQ1 311 aa9.19□□□□□ -0.94
RFFL-209ENST00000581265 TMEM19Q96HH6 336 aa9.19□□□□□ -0.94
RFFL-209ENST00000581265 ITCHQ96J02 903 aa9.19□□□□□ -0.94
RFFL-209ENST00000581265 MAELQ96JY0 434 aaKnown RBP9.19□□□□□ -0.94
RFFL-209ENST00000581265 OXGR1Q96P68 337 aa9.19□□□□□ -0.94
RFFL-209ENST00000581265 PAIP2Q9BPZ3 127 aaKnown RBP9.19□□□□□ -0.94
RFFL-209ENST00000581265 PTDSS2Q9BVG9 487 aa9.19□□□□□ -0.94
RFFL-209ENST00000581265 BPESC1Q9GZL8 116 aa9.19□□□□□ -0.94
RFFL-209ENST00000581265 RMND5AQ9H871 391 aa9.19□□□□□ -0.94
RFFL-209ENST00000581265 CHODLQ9H9P2 273 aa9.19□□□□□ -0.94
RFFL-209ENST00000581265 BCL2L10Q9HD36 194 aa9.19□□□□□ -0.94
RFFL-209ENST00000581265 ZIM2Q9NZV7 527 aa9.19□□□□□ -0.94
RFFL-209ENST00000581265 B3GAT1Q9P2W7 334 aa9.19□□□□□ -0.94
RFFL-209ENST00000581265 TMEM129A0AVI4 362 aa9.18□□□□□ -0.94
RFFL-209ENST00000581265 TMEM247A6NEH6 219 aa9.18□□□□□ -0.94
RFFL-209ENST00000581265 OR2T1O43869 369 aa9.18□□□□□ -0.94
RFFL-209ENST00000581265 LILRA1O75019 489 aa9.18□□□□□ -0.94
RFFL-209ENST00000581265 SLC43A1O75387 559 aa9.18□□□□□ -0.94
RFFL-209ENST00000581265 ANP32DO95626 131 aa9.18□□□□□ -0.94
RFFL-209ENST00000581265 TACSTD2P09758 323 aa9.18□□□□□ -0.94
RFFL-209ENST00000581265 BMP2P12643 396 aa9.18□□□□□ -0.94
RFFL-209ENST00000581265 NPR2P20594 1047 aa9.18□□□□□ -0.94
RFFL-209ENST00000581265 THBS4P35443 961 aa9.18□□□□□ -0.94
RFFL-209ENST00000581265 RPS5P46782 204 aaKnown RBP9.18□□□□□ -0.94
RFFL-209ENST00000581265 CLDN17P56750 224 aa9.18□□□□□ -0.94
RFFL-209ENST00000581265 WDR4P57081 412 aaKnown RBP9.18□□□□□ -0.94
RFFL-209ENST00000581265 ZNF311Q5JNZ3 666 aa9.18□□□□□ -0.94
RFFL-209ENST00000581265 RPS26P11Q5JNZ5 115 aaPredicted RBP9.18□□□□□ -0.94
RFFL-209ENST00000581265 CEP85LQ5SZL2 805 aa9.18□□□□□ -0.94
RFFL-209ENST00000581265 HHATQ5VTY9 493 aa9.18□□□□□ -0.94
RFFL-209ENST00000581265 ATG16L1Q676U5 607 aa9.18□□□□□ -0.94
RFFL-209ENST00000581265 VHLLQ6RSH7 139 aa9.18□□□□□ -0.94
RFFL-209ENST00000581265 C5orf46Q6UWT4 87 aa9.18□□□□□ -0.94
RFFL-209ENST00000581265 C6orf89Q6UWU4 347 aa9.18□□□□□ -0.94
RFFL-209ENST00000581265 IL17RELQ6ZVW7 336 aa9.18□□□□□ -0.94
RFFL-209ENST00000581265 NET1Q7Z628 596 aaPredicted RBP9.18□□□□□ -0.94
RFFL-209ENST00000581265 CROCCP2Q86T23 111 aa9.18□□□□□ -0.94
RFFL-209ENST00000581265 ZNF786Q8N393 782 aa9.18□□□□□ -0.94
RFFL-209ENST00000581265 LSMEM1Q8N8F7 131 aa9.18□□□□□ -0.94
RFFL-209ENST00000581265 HPS1Q92902 700 aa9.18□□□□□ -0.94
RFFL-209ENST00000581265 VPS33AQ96AX1 596 aa9.18□□□□□ -0.94
RFFL-209ENST00000581265 KTI12Q96EK9 354 aaPredicted RBP9.18□□□□□ -0.94
RFFL-209ENST00000581265 ANKRD27Q96NW4 1050 aa9.18□□□□□ -0.94
RFFL-209ENST00000581265 SOX7Q9BT81 388 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms