RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 UCK2Q9BZX2 261 aa13.88□□□□□ -0.19
SS18-216ENST00000580751 SMURF2Q9HAU4 748 aa13.88□□□□□ -0.19
SS18-216ENST00000580751 COQ3Q9NZJ6 369 aa13.88□□□□□ -0.19
SS18-216ENST00000580751 MAGED1Q9Y5V3 778 aaPredicted RBP13.88□□□□□ -0.19
SS18-216ENST00000580751 ARHGAP21Q5T5U3 1957 aa13.88□□□□□ -0.19
SS18-216ENST00000580751 SPTBN1Q01082 2364 aaKnown RBP13.87□□□□□ -0.19
SS18-216ENST00000580751 IGKV1D-42A0A075B6H8 117 aa13.87□□□□□ -0.19
SS18-216ENST00000580751 TRAV36DV7A0A075B6V5 113 aa13.87□□□□□ -0.19
SS18-216ENST00000580751 CLEC18AA5D8T8 446 aa13.87□□□□□ -0.19
SS18-216ENST00000580751 HSPB2A8KAH6 182 aa13.87□□□□□ -0.19
SS18-216ENST00000580751 KDM4EB2RXH2 506 aaPredicted RBP13.87□□□□□ -0.19
SS18-216ENST00000580751 SLC16A6O15403 523 aa13.87□□□□□ -0.19
SS18-216ENST00000580751 KLF4O43474 513 aa13.87□□□□□ -0.19
SS18-216ENST00000580751 OR2T1O43869 369 aa13.87□□□□□ -0.19
SS18-216ENST00000580751 EIF1BO60739 113 aaKnown RBP13.87□□□□□ -0.19
SS18-216ENST00000580751 TGM6O95932 706 aa13.87□□□□□ -0.19
SS18-216ENST00000580751 GASTP01350 101 aa13.87□□□□□ -0.19
SS18-216ENST00000580751 ENPP1P22413 925 aa13.87□□□□□ -0.19
SS18-216ENST00000580751 CEACAM8P31997 349 aaPredicted RBP13.87□□□□□ -0.19
SS18-216ENST00000580751 GSSP48637 474 aa13.87□□□□□ -0.19
SS18-216ENST00000580751 ADORA2A-AS1P86434 159 aa13.87□□□□□ -0.19
SS18-216ENST00000580751 EGR4Q05215 589 aa13.87□□□□□ -0.19
SS18-216ENST00000580751 IL18R1Q13478 541 aa13.87□□□□□ -0.19
SS18-216ENST00000580751 HSPB2Q16082 182 aa13.87□□□□□ -0.19
SS18-216ENST00000580751 GTF2IRD2BQ6EKJ0 949 aa13.87□□□□□ -0.19
SS18-216ENST00000580751 RPL13AP3Q6NVV1 102 aa13.87□□□□□ -0.19
SS18-216ENST00000580751 CLEC18BQ6UXF7 455 aa13.87□□□□□ -0.19
SS18-216ENST00000580751 NCCRP1Q6ZVX7 275 aaPredicted RBP13.87□□□□□ -0.19
SS18-216ENST00000580751 GTF2IRD2Q86UP8 949 aa13.87□□□□□ -0.19
SS18-216ENST00000580751 NRMQ8IXM6 262 aa13.87□□□□□ -0.19
SS18-216ENST00000580751 DHRSXQ8N5I4 330 aa13.87□□□□□ -0.19
SS18-216ENST00000580751 CLEC18CQ8NCF0 446 aa13.87□□□□□ -0.19
SS18-216ENST00000580751 OR9Q2Q8NGE9 314 aa13.87□□□□□ -0.19
SS18-216ENST00000580751 TMEM255BQ8WV15 326 aa13.87□□□□□ -0.19
SS18-216ENST00000580751 LIPHQ8WWY8 451 aa13.87□□□□□ -0.19
SS18-216ENST00000580751 TACO1Q9BSH4 297 aaKnown RBP13.87□□□□□ -0.19
SS18-216ENST00000580751 RNF122Q9H9V4 155 aa13.87□□□□□ -0.19
SS18-216ENST00000580751 MPDZO75970 2070 aa13.86□□□□□ -0.19
SS18-216ENST00000580751 A0A0G2JNJ9 132 aa13.86□□□□□ -0.19
SS18-216ENST00000580751 LIPT2A6NK58 231 aa13.86□□□□□ -0.19
SS18-216ENST00000580751 DLGAP1O14490 977 aa13.86□□□□□ -0.19
SS18-216ENST00000580751 TOXO94900 526 aa13.86□□□□□ -0.19
SS18-216ENST00000580751 RCBTB2O95199 551 aa13.86□□□□□ -0.19
SS18-216ENST00000580751 CRHP06850 196 aa13.86□□□□□ -0.19
SS18-216ENST00000580751 IMPDH2P12268 514 aa13.86□□□□□ -0.19
SS18-216ENST00000580751 OSMP13725 252 aa13.86□□□□□ -0.19
SS18-216ENST00000580751 AGAP20933 346 aa13.86□□□□□ -0.19
SS18-216ENST00000580751 GTF2E2P29084 291 aaKnown RBP13.86□□□□□ -0.19
SS18-216ENST00000580751 SLC9A3P48764 834 aa13.86□□□□□ -0.19
SS18-216ENST00000580751 AGFG1P52594 562 aaKnown RBP13.86□□□□□ -0.19
SS18-216ENST00000580751 OR2B6P58173 313 aa13.86□□□□□ -0.19
SS18-216ENST00000580751 MFSD13AQ14CX5 517 aa13.86□□□□□ -0.19
SS18-216ENST00000580751 RNPS1Q15287 305 aaKnown RBP13.86□□□□□ -0.19
SS18-216ENST00000580751 TAF11Q15544 211 aa13.86□□□□□ -0.19
SS18-216ENST00000580751 OR7A5Q15622 319 aa13.86□□□□□ -0.19
SS18-216ENST00000580751 FAM69AQ5T7M9 428 aa13.86□□□□□ -0.19
SS18-216ENST00000580751 PLXDC2Q6UX71 529 aa13.86□□□□□ -0.19
SS18-216ENST00000580751 WDR88Q6ZMY6 472 aa13.86□□□□□ -0.19
SS18-216ENST00000580751 RASSF6Q6ZTQ3 369 aa13.86□□□□□ -0.19
SS18-216ENST00000580751 FCRLAQ7L513 359 aa13.86□□□□□ -0.19
SS18-216ENST00000580751 MCEMP1Q8IX19 187 aa13.86□□□□□ -0.19
SS18-216ENST00000580751 ZNF808Q8N4W9 903 aaPredicted RBP13.86□□□□□ -0.19
SS18-216ENST00000580751 MFSD8Q8NHS3 518 aa13.86□□□□□ -0.19
SS18-216ENST00000580751 RNF128Q8TEB7 428 aa13.86□□□□□ -0.19
SS18-216ENST00000580751 SSC4DQ8WTU2 575 aa13.86□□□□□ -0.19
SS18-216ENST00000580751 ASB5Q8WWX0 329 aa13.86□□□□□ -0.19
SS18-216ENST00000580751 TFAP2CQ92754 450 aa13.86□□□□□ -0.19
SS18-216ENST00000580751 BPIFA2Q96DR5 249 aa13.86□□□□□ -0.19
SS18-216ENST00000580751 KTI12Q96EK9 354 aaPredicted RBP13.86□□□□□ -0.19
SS18-216ENST00000580751 DOCK7Q96N67 2140 aa13.86□□□□□ -0.19
SS18-216ENST00000580751 ADI1Q9BV57 179 aa13.86□□□□□ -0.19
SS18-216ENST00000580751 GLRX2Q9NS18 164 aa13.86□□□□□ -0.19
SS18-216ENST00000580751 Q9UFV3 132 aa13.86□□□□□ -0.19
SS18-216ENST00000580751 NCOA6Q14686 2063 aaPredicted RBP13.86□□□□□ -0.19
SS18-216ENST00000580751 SMAD9O15198 467 aaKnown RBP13.85□□□□□ -0.19
SS18-216ENST00000580751 DENRO43583 198 aaKnown RBP13.85□□□□□ -0.19
SS18-216ENST00000580751 ZG16O60844 167 aa13.85□□□□□ -0.19
SS18-216ENST00000580751 AQP8O94778 261 aa13.85□□□□□ -0.19
SS18-216ENST00000580751 PLGP00747 810 aaPredicted RBP13.85□□□□□ -0.19
SS18-216ENST00000580751 MT-ATP6P00846 226 aa13.85□□□□□ -0.19
SS18-216ENST00000580751 TMIGD3P0DMS9 266 aaPredicted RBP13.85□□□□□ -0.19
SS18-216ENST00000580751 FUT4P22083 530 aa13.85□□□□□ -0.19
SS18-216ENST00000580751 CHRNB4P30926 498 aa13.85□□□□□ -0.19
SS18-216ENST00000580751 CAPGP40121 348 aa13.85□□□□□ -0.19
SS18-216ENST00000580751 RPS5P46782 204 aaKnown RBP13.85□□□□□ -0.19
SS18-216ENST00000580751 LAPTM4AQ15012 233 aa13.85□□□□□ -0.19
SS18-216ENST00000580751 SLC36A3Q495N2 470 aa13.85□□□□□ -0.19
SS18-216ENST00000580751 EEF1A1P5Q5VTE0 462 aa13.85□□□□□ -0.19
SS18-216ENST00000580751 PAQR6Q6TCH4 344 aa13.85□□□□□ -0.19
SS18-216ENST00000580751 MRGPRGQ86SM5 289 aa13.85□□□□□ -0.19
SS18-216ENST00000580751 ZNF555Q8NEP9 628 aa13.85□□□□□ -0.19
SS18-216ENST00000580751 DNAJA3Q96EY1 480 aa13.85□□□□□ -0.19
SS18-216ENST00000580751 NAA11Q9BSU3 229 aaPredicted RBP13.85□□□□□ -0.19
SS18-216ENST00000580751 PTDSS2Q9BVG9 487 aa13.85□□□□□ -0.19
SS18-216ENST00000580751 SFXN3Q9BWM7 321 aa13.85□□□□□ -0.19
SS18-216ENST00000580751 GP6Q9HCN6 339 aa13.85□□□□□ -0.19
SS18-216ENST00000580751 KLHL9Q9P2J3 617 aa13.85□□□□□ -0.19
SS18-216ENST00000580751 RNF6Q9Y252 685 aa13.85□□□□□ -0.19
SS18-216ENST00000580751 KIAA1549Q9HCM3 1950 aa13.85□□□□□ -0.19
SS18-216ENST00000580751 IGHV3-15A0A0B4J1V0 119 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms