RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 TNIP2Q8NFZ5 429 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 OR5M9Q8NGP3 310 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 OR6S1Q8NH40 331 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 OR10D3Q8NH80 312 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 OR2V1Q8NHB1 315 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 VANGL1Q8TAA9 524 aaPredicted RBP3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 FNDC9Q8TBE3 224 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 ADAMTS16Q8TE57 1224 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 SLC25A43Q8WUT9 341 aaPredicted RBP3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 ITLN2Q8WWU7 325 aaPredicted RBP3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 RASSF5Q8WWW0 418 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 LIPHQ8WWY8 451 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 GEMIN6Q8WXD5 167 aaKnown RBP3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 TMEM234Q8WY98 164 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 SARAFQ96BY9 339 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 KTI12Q96EK9 354 aaPredicted RBP3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 PYURFQ96I23 114 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 PRRC1Q96M27 445 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 KLHL15Q96M94 604 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 MOGAT1Q96PD6 335 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 ZNF300Q96RE9 604 aaPredicted RBP3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 MCHR1Q99705 422 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 GPA33Q99795 319 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 VKORC1Q9BQB6 163 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 ZNF559Q9BR84 538 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 PIGQQ9BRB3 760 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 TTYH2Q9BSA4 534 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 TMEM43Q9BTV4 400 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 THTPAQ9BU02 230 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 POTEKPQ9BYX7 375 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 TRIM2Q9C040 744 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 POLR2J2Q9GZM3 115 aaKnown RBP3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 POLR2J3Q9H1A7 115 aaKnown RBP3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 TP63Q9H3D4 680 aaPredicted RBP3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 MMADHCQ9H3L0 296 aaPredicted RBP3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 MUC13Q9H3R2 512 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 MAGIXQ9H6Y5 334 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 TMEM185BQ9H7F4 350 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 PTGES2Q9H7Z7 377 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 NTN4Q9HB63 628 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 IL1RAPQ9NPH3 570 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 C20orf141Q9NUB4 165 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 JKAMPQ9P055 326 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 Q9UFV3 132 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 CHRNA9Q9UGM1 479 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 RIMS3Q9UJD0 308 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 BAG5Q9UL15 447 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 OSGIN2Q9Y236 505 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 SH3GLB1Q9Y371 365 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 ZNF175Q9Y473 711 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 ENPP4Q9Y6X5 453 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 TANC2Q9HCD6 1990 aa3.37□□□□□ -1.87
SMARCE1-215ENST00000578995 YLPM1P49750 1951 aaKnown RBP3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 SETXQ7Z333 2677 aaKnown RBP3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 TRBV4-1A0A0J9YWV2 114 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 LOC102725191A0A1B0GVB3 256 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 A0A1W2PNV4 684 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 A0A1W2PRQ8 180 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 TRAPPC13A5PLN9 417 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 TMEM247A6NEH6 219 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 AQP12BA6NM10 295 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 A8MVM7 634 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 AHRRA9YTQ3 701 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 E9PQ18 207 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 MS4A18H0YCH9 400 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 hCG_2039718K7EN88 272 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 CDC42EP2O14613 210 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 TNFSF11O14788 317 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 GYG2O15488 501 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 SEC14L5O43304 696 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 DNPH1O43598 174 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 TRAF3IP2O43734 574 aaPredicted RBP3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 CYTIPO60759 359 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 SS18L1O75177 396 aaPredicted RBP3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 CYP7B1O75881 506 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 ATP5HO75947 161 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 DIRAS1O95057 198 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 RCBTB2O95199 551 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 MT-ND1P03886 318 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 TPOP07202 933 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 ASAH2BP0C7U1 165 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 PNMTP11086 282 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 GP1BBP13224 206 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 GABRA1P14867 456 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 ABOP16442 354 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 IGFBP2P18065 325 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 FUT1P19526 365 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 POU3F2P20265 443 aaPredicted RBP3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 MAKP20794 623 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 PTNP21246 168 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 ENPP1P22413 925 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 AGTR1P30556 359 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 UQCRC1P31930 480 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 CCKARP32238 428 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 SFTPDP35247 375 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 PTGER4P35408 488 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 RBM34P42696 430 aaKnown RBP3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 HTR3AP46098 478 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 OMPP47874 163 aa3.36□□□□□ -1.87
SMARCE1-215ENST00000578995 CLK1P49759 484 aaKnown RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms