RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-209ENST00000578329 ZNF563Q8TA94 476 aa3.84□□□□□ -1.79
PPP4R1-209ENST00000578329 ZNF417Q8TAU3 575 aa3.84□□□□□ -1.79
PPP4R1-209ENST00000578329 MAGEE2Q8TD90 523 aaPredicted RBP3.84□□□□□ -1.79
PPP4R1-209ENST00000578329 GTF3AQ92664 365 aaKnown RBP3.84□□□□□ -1.79
PPP4R1-209ENST00000578329 NMD3Q96D46 503 aaKnown RBP3.84□□□□□ -1.79
PPP4R1-209ENST00000578329 MUCL1Q96DR8 90 aa3.84□□□□□ -1.79
PPP4R1-209ENST00000578329 FBXO17Q96EF6 278 aa3.84□□□□□ -1.79
PPP4R1-209ENST00000578329 TRMT61AQ96FX7 289 aaKnown RBP3.84□□□□□ -1.79
PPP4R1-209ENST00000578329 MS4A3Q96HJ5 214 aa3.84□□□□□ -1.79
PPP4R1-209ENST00000578329 REXO5Q96IC2 774 aaKnown RBP3.84□□□□□ -1.79
PPP4R1-209ENST00000578329 SLC38A2Q96QD8 506 aa3.84□□□□□ -1.79
PPP4R1-209ENST00000578329 ZNF587Q96SQ5 575 aaPredicted RBP3.84□□□□□ -1.79
PPP4R1-209ENST00000578329 PRPF18Q99633 342 aaKnown RBP3.84□□□□□ -1.79
PPP4R1-209ENST00000578329 USB1Q9BQ65 265 aaKnown RBP3.84□□□□□ -1.79
PPP4R1-209ENST00000578329 SF3B5Q9BWJ5 86 aaKnown RBP3.84□□□□□ -1.79
PPP4R1-209ENST00000578329 SPATA9Q9BWV2 254 aa3.84□□□□□ -1.79
PPP4R1-209ENST00000578329 LINC00470Q9BZP3 86 aa3.84□□□□□ -1.79
PPP4R1-209ENST00000578329 BPESC1Q9GZL8 116 aa3.84□□□□□ -1.79
PPP4R1-209ENST00000578329 IQCGQ9H095 443 aaKnown RBP3.84□□□□□ -1.79
PPP4R1-209ENST00000578329 GPR35Q9HC97 309 aa3.84□□□□□ -1.79
PPP4R1-209ENST00000578329 HHATLQ9HCP6 504 aa3.84□□□□□ -1.79
PPP4R1-209ENST00000578329 A4GALTQ9NPC4 353 aa3.84□□□□□ -1.79
PPP4R1-209ENST00000578329 SERINC1Q9NRX5 453 aa3.84□□□□□ -1.79
PPP4R1-209ENST00000578329 CA10Q9NS85 328 aa3.84□□□□□ -1.79
PPP4R1-209ENST00000578329 ADPRHL2Q9NX46 363 aa3.84□□□□□ -1.79
PPP4R1-209ENST00000578329 EMC3Q9P0I2 261 aa3.84□□□□□ -1.79
PPP4R1-209ENST00000578329 GMPR2Q9P2T1 348 aaKnown RBP3.84□□□□□ -1.79
PPP4R1-209ENST00000578329 USP22Q9UPT9 525 aa3.84□□□□□ -1.79
PPP4R1-209ENST00000578329 SLC9A8Q9Y2E8 581 aa3.84□□□□□ -1.79
PPP4R1-209ENST00000578329 TRRAPQ9Y4A5 3859 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 IGKV1D-43A0A0B4J1Z2 117 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 A0A0B4J2E0 115 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 A0A1B0GX12 115 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 CIB4A0PJX0 185 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 FAM157AC9JC47 383 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 FXYD1O00168 92 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 CLIC1O00299 241 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 RFXANKO14593 260 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 RGS16O15492 202 aaPredicted RBP3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 EIF1BO60739 113 aaKnown RBP3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 RP2O75695 350 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 SLC22A3O75751 556 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 MFN2O95140 757 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 STAMBPO95630 424 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 AGR2O95994 175 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 HLA-HP01893 362 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 HPXP02790 462 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 OR4A8P0C604 315 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 NR2F1P10589 423 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 CBR1P16152 277 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 SLC25A16P16260 332 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 IL7RP16871 459 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 GPX2P18283 190 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 CD247P20963 164 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 USF1P22415 310 aaPredicted RBP3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 CBLP22681 906 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 COL8A2P25067 703 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 GRPRP30550 384 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 CHI3L1P36222 383 aaPredicted RBP3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 SERPINF1P36955 418 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 MAGEA8P43361 318 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 HTR3AP46098 478 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 RPS5P46782 204 aaKnown RBP3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 IDH3AP50213 366 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 NUDT6P53370 316 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 SEC24CP53992 1094 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 CLNS1AP54105 237 aaKnown RBP3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 SLC18A1P54219 525 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 CLDN17P56750 224 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 PRPS1P60891 318 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 DSTNP60981 165 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 MAGOHP61326 146 aaKnown RBP3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 ROR2Q01974 943 aaKnown RBP3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 IFFO1Q0D2I5 559 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 NRF1Q16656 503 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 DUSP7Q16829 419 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 CEACAM16Q2WEN9 425 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 CHRFAM7AQ494W8 412 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 TTMPQ5BVD1 217 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 ATAD3BQ5T9A4 648 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 OR7E24Q6IFN5 339 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 NIPAL3Q6P499 406 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 LRFN4Q6PJG9 635 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 DHRS4L2Q6PKH6 230 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 DEF8Q6ZN54 512 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 TSEN54Q7Z6J9 526 aaKnown RBP3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 MDP1Q86V88 176 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 C20orf196Q8IYI0 205 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 CADM2Q8N3J6 435 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 SVOPLQ8N434 492 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 LRRC17Q8N6Y2 441 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 FAM169BQ8N8A8 192 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 NUP37Q8NFH4 326 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 NFKBIDQ8NI38 313 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 MGARPQ8TDB4 240 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 STK35Q8TDR2 534 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 FAM168AQ92567 244 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 PROX1Q92786 737 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 PMM1Q92871 262 aa3.83□□□□□ -1.8
PPP4R1-209ENST00000578329 YIPF5Q969M3 257 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms