RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 AKR7A2O43488 359 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 LANCL1O43813 399 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 TYROBPO43914 113 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 LRP3O75074 770 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 SNNO75324 88 aaPredicted RBP3.73□□□□□ -1.81
NUP88-213ENST00000576862 ATP5HO75947 161 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 PDE5AO76074 875 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 DUSP14O95147 198 aaKnown RBP3.73□□□□□ -1.81
NUP88-213ENST00000576862 NDUFB10O96000 172 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 RETP07949 1114 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 P0C879 139 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 IGFBP5P24593 272 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 RPS12P25398 132 aaKnown RBP3.73□□□□□ -1.81
NUP88-213ENST00000576862 HTR2AP28223 471 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 ATP5C1P36542 298 aaKnown RBP3.73□□□□□ -1.81
NUP88-213ENST00000576862 CCT3P49368 545 aaKnown RBP3.73□□□□□ -1.81
NUP88-213ENST00000576862 CNN1P51911 297 aaKnown RBP3.73□□□□□ -1.81
NUP88-213ENST00000576862 SNAP25P60880 206 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 KLRC3Q07444 240 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 TGM3Q08188 693 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 PPP1R8Q12972 351 aaKnown RBP3.73□□□□□ -1.81
NUP88-213ENST00000576862 ZNF79Q15937 498 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 PAN3Q58A45 887 aaKnown RBP3.73□□□□□ -1.81
NUP88-213ENST00000576862 PAQR7Q86WK9 346 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 LRRC6Q86X45 466 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 CDKL3Q8IVW4 592 aaPredicted RBP3.73□□□□□ -1.81
NUP88-213ENST00000576862 KATNAL2Q8IYT4 538 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 UBE2J2Q8N2K1 259 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 Q8N7P7 452 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 ANKFN1Q8N957 763 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 Q8N9G6 341 aaPredicted RBP3.73□□□□□ -1.81
NUP88-213ENST00000576862 STKLD1Q8NE28 680 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 SPATA4Q8NEY3 305 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 ENKURQ8TC29 256 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 ACER1Q8TDN7 264 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 SCFD1Q8WVM8 642 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 TNFRSF14Q92956 283 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 ZIM3Q96PE6 472 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 SH3GL3Q99963 347 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 SPATA16Q9BXB7 569 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 SHCBP1LQ9BZQ2 653 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 NMNAT2Q9BZQ4 307 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 TSGA10Q9BZW7 698 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 CENPHQ9H3R5 247 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 RGCCQ9H4X1 137 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 STARD5Q9NSY2 213 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 MOKQ9UQ07 419 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 BZW2Q9Y6E2 419 aaKnown RBP3.73□□□□□ -1.81
NUP88-213ENST00000576862 QSER1Q2KHR3 1735 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 CASZ1Q86V15 1759 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 NPIPA5A0A0B4J1W7 369 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 BTBD17A6NE02 478 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 FRG2CA6NGY1 282 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 TMEM210A6NLX4 147 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 PP2D1A8MPX8 630 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 SUPT3HB4E1H0 165 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 NPIPA5E9PKD4 350 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 GOLGA6L19H0YKK7 550 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 ZBTB5O15062 677 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 ARPC1BO15143 372 aaKnown RBP3.72□□□□□ -1.81
NUP88-213ENST00000576862 CDH16O75309 829 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 ATP6V1G1O75348 118 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 UGT2B4P06133 528 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 CAPN1P07384 714 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 APRTP07741 180 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 PLEKP08567 350 aaPredicted RBP3.72□□□□□ -1.81
NUP88-213ENST00000576862 HIST1H2AGP0C0S8 130 aaPredicted RBP3.72□□□□□ -1.81
NUP88-213ENST00000576862 PABPC4LP0CB38 370 aaKnown RBP3.72□□□□□ -1.81
NUP88-213ENST00000576862 STAG3L2P0CL84 134 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 IDSP22304 550 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 PSMD7P51665 324 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 HNRNPFP52597 415 aaKnown RBP3.72□□□□□ -1.81
NUP88-213ENST00000576862 NLRP11P59045 1033 aaKnown RBP3.72□□□□□ -1.81
NUP88-213ENST00000576862 CCZ1BP86790 482 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 CCZ1P86791 482 aaPredicted RBP3.72□□□□□ -1.81
NUP88-213ENST00000576862 GALK2Q01415 458 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 HSF2Q03933 536 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 KDSRQ06136 332 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 FADDQ13158 208 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 PNOCQ13519 176 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 ANGPT1Q15389 498 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 UBE2SQ16763 222 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 QRICH1Q2TAL8 776 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 ZNF311Q5JNZ3 666 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 SAPCD1Q5SSQ6 148 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 C9orf129Q5T035 196 aaKnown RBP3.72□□□□□ -1.81
NUP88-213ENST00000576862 AGBL2Q5U5Z8 902 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 LRRC66Q68CR7 880 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 NCR3LG1Q68D85 454 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 C2orf66Q6UXQ4 117 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 LINC00523Q86TU6 105 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 STX12Q86Y82 276 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 ECHDC2Q86YB7 292 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.72□□□□□ -1.81
NUP88-213ENST00000576862 MISPQ8IVT2 679 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 UBQLNLQ8IYU4 475 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 FNDC5Q8NAU1 212 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 OR9K2Q8NGE7 335 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 GLYATL2Q8WU03 294 aa3.72□□□□□ -1.81
NUP88-213ENST00000576862 U2AF1L4Q8WU68 220 aaKnown RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms